CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1607
VAL 2PHE 3 0.2313
PHE 3GLY 4 0.2541
GLY 4ARG 5 0.4760
ARG 5CYS 6 -0.0652
CYS 6GLU 7 0.8462
GLU 7LEU 8 -0.1637
LEU 8ALA 9 0.3343
ALA 9ALA 10 0.3045
ALA 10ALA 11 0.2604
ALA 11MET 12 0.0883
MET 12LYS 13 0.3022
LYS 13ARG 14 0.3414
ARG 14HIS 15 0.0260
HIS 15GLY 16 0.4488
GLY 16LEU 17 0.2763
LEU 17ASP 18 0.3822
ASP 18ASN 19 0.4674
ASN 19TYR 20 0.3780
TYR 20ARG 21 0.3870
ARG 21GLY 22 0.3864
GLY 22TYR 23 0.1495
TYR 23SER 24 0.3350
SER 24LEU 25 0.5013
LEU 25GLY 26 0.1692
GLY 26ASN 27 0.3770
ASN 27TRP 28 0.3518
TRP 28VAL 29 0.0337
VAL 29CYS 30 0.2843
CYS 30ALA 31 0.1344
ALA 31ALA 32 0.2890
ALA 32LYS 33 0.1391
LYS 33PHE 34 0.3608
PHE 34GLU 35 0.1602
GLU 35SER 36 0.1062
SER 36ASN 37 -0.0286
ASN 37PHE 38 0.1018
PHE 38ASN 39 0.2271
ASN 39THR 40 -0.0143
THR 40GLN 41 0.1308
GLN 41ALA 42 0.1844
ALA 42THR 43 0.4473
THR 43ASN 44 0.4953
ASN 44ARG 45 1.1046
ARG 45ASN 46 0.8716
ASN 46THR 47 1.3256
THR 47ASP 48 1.0717
ASP 48GLY 49 1.0051
GLY 49SER 50 1.0337
SER 50THR 51 0.6388
THR 51ASP 52 0.6781
ASP 52TYR 53 0.0766
TYR 53GLY 54 -0.0280
GLY 54ILE 55 -0.1223
ILE 55LEU 56 0.0306
LEU 56GLN 57 -0.3247
GLN 57ILE 58 0.2517
ILE 58ASN 59 -0.2795
ASN 59SER 60 0.3652
SER 60ARG 61 0.3236
ARG 61TRP 62 0.7251
TRP 62TRP 63 0.1248
TRP 63CYS 64 0.3823
CYS 64ASN 65 0.5419
ASN 65ASP 66 0.6400
ASP 66GLY 67 0.6068
GLY 67ARG 68 0.9143
ARG 68THR 69 0.7400
THR 69PRO 70 0.3223
PRO 70GLY 71 1.0440
GLY 71SER 72 0.7215
SER 72ARG 73 0.7932
ARG 73ASN 74 -0.0435
ASN 74LEU 75 0.4889
LEU 75CYS 76 0.0913
CYS 76ASN 77 0.3840
ASN 77ILE 78 0.1221
ILE 78PRO 79 0.5284
PRO 79CYS 80 0.1078
CYS 80SER 81 0.0346
SER 81ALA 82 0.4806
ALA 82LEU 83 -0.0526
LEU 83LEU 84 -0.0338
LEU 84SER 85 0.5048
SER 85SER 86 0.0958
SER 86ASP 87 0.1205
ASP 87ILE 88 0.1630
ILE 88THR 89 0.0280
THR 89ALA 90 0.4561
ALA 90SER 91 0.0619
SER 91VAL 92 0.3975
VAL 92ASN 93 0.0071
ASN 93CYS 94 0.2006
CYS 94ALA 95 0.3962
ALA 95LYS 96 0.2282
LYS 96LYS 97 0.5751
LYS 97ILE 98 0.3301
ILE 98VAL 99 0.5039
VAL 99SER 100 0.0849
SER 100ASP 101 0.3643
ASP 101GLY 102 0.7872
GLY 102ASN 103 0.4280
ASN 103GLY 104 0.6095
GLY 104MET 105 0.2092
MET 105ASN 106 0.5702
ASN 106ALA 107 0.4968
ALA 107TRP 108 0.1413
TRP 108VAL 109 0.3951
VAL 109ALA 110 0.1126
ALA 110TRP 111 0.3237
TRP 111ARG 112 0.5757
ARG 112ASN 113 0.1956
ASN 113ARG 114 0.4206
ARG 114CYS 115 0.3603
CYS 115LYS 116 0.4405
LYS 116GLY 117 0.3223
GLY 117THR 118 0.4609
THR 118ASP 119 0.4469
ASP 119VAL 120 0.3115
VAL 120GLN 121 0.3422
GLN 121ALA 122 0.0471
ALA 122TRP 123 -0.1178
TRP 123ILE 124 0.4494
ILE 124ARG 125 -0.0996
ARG 125GLY 126 1.0387
GLY 126CYS 127 0.9708
CYS 127ARG 128 1.7880
ARG 128LEU 129 1.7372

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.