This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1607
VAL 2
PHE 3
0.2313
PHE 3
GLY 4
0.2541
GLY 4
ARG 5
0.4760
ARG 5
CYS 6
-0.0652
CYS 6
GLU 7
0.8462
GLU 7
LEU 8
-0.1637
LEU 8
ALA 9
0.3343
ALA 9
ALA 10
0.3045
ALA 10
ALA 11
0.2604
ALA 11
MET 12
0.0883
MET 12
LYS 13
0.3022
LYS 13
ARG 14
0.3414
ARG 14
HIS 15
0.0260
HIS 15
GLY 16
0.4488
GLY 16
LEU 17
0.2763
LEU 17
ASP 18
0.3822
ASP 18
ASN 19
0.4674
ASN 19
TYR 20
0.3780
TYR 20
ARG 21
0.3870
ARG 21
GLY 22
0.3864
GLY 22
TYR 23
0.1495
TYR 23
SER 24
0.3350
SER 24
LEU 25
0.5013
LEU 25
GLY 26
0.1692
GLY 26
ASN 27
0.3770
ASN 27
TRP 28
0.3518
TRP 28
VAL 29
0.0337
VAL 29
CYS 30
0.2843
CYS 30
ALA 31
0.1344
ALA 31
ALA 32
0.2890
ALA 32
LYS 33
0.1391
LYS 33
PHE 34
0.3608
PHE 34
GLU 35
0.1602
GLU 35
SER 36
0.1062
SER 36
ASN 37
-0.0286
ASN 37
PHE 38
0.1018
PHE 38
ASN 39
0.2271
ASN 39
THR 40
-0.0143
THR 40
GLN 41
0.1308
GLN 41
ALA 42
0.1844
ALA 42
THR 43
0.4473
THR 43
ASN 44
0.4953
ASN 44
ARG 45
1.1046
ARG 45
ASN 46
0.8716
ASN 46
THR 47
1.3256
THR 47
ASP 48
1.0717
ASP 48
GLY 49
1.0051
GLY 49
SER 50
1.0337
SER 50
THR 51
0.6388
THR 51
ASP 52
0.6781
ASP 52
TYR 53
0.0766
TYR 53
GLY 54
-0.0280
GLY 54
ILE 55
-0.1223
ILE 55
LEU 56
0.0306
LEU 56
GLN 57
-0.3247
GLN 57
ILE 58
0.2517
ILE 58
ASN 59
-0.2795
ASN 59
SER 60
0.3652
SER 60
ARG 61
0.3236
ARG 61
TRP 62
0.7251
TRP 62
TRP 63
0.1248
TRP 63
CYS 64
0.3823
CYS 64
ASN 65
0.5419
ASN 65
ASP 66
0.6400
ASP 66
GLY 67
0.6068
GLY 67
ARG 68
0.9143
ARG 68
THR 69
0.7400
THR 69
PRO 70
0.3223
PRO 70
GLY 71
1.0440
GLY 71
SER 72
0.7215
SER 72
ARG 73
0.7932
ARG 73
ASN 74
-0.0435
ASN 74
LEU 75
0.4889
LEU 75
CYS 76
0.0913
CYS 76
ASN 77
0.3840
ASN 77
ILE 78
0.1221
ILE 78
PRO 79
0.5284
PRO 79
CYS 80
0.1078
CYS 80
SER 81
0.0346
SER 81
ALA 82
0.4806
ALA 82
LEU 83
-0.0526
LEU 83
LEU 84
-0.0338
LEU 84
SER 85
0.5048
SER 85
SER 86
0.0958
SER 86
ASP 87
0.1205
ASP 87
ILE 88
0.1630
ILE 88
THR 89
0.0280
THR 89
ALA 90
0.4561
ALA 90
SER 91
0.0619
SER 91
VAL 92
0.3975
VAL 92
ASN 93
0.0071
ASN 93
CYS 94
0.2006
CYS 94
ALA 95
0.3962
ALA 95
LYS 96
0.2282
LYS 96
LYS 97
0.5751
LYS 97
ILE 98
0.3301
ILE 98
VAL 99
0.5039
VAL 99
SER 100
0.0849
SER 100
ASP 101
0.3643
ASP 101
GLY 102
0.7872
GLY 102
ASN 103
0.4280
ASN 103
GLY 104
0.6095
GLY 104
MET 105
0.2092
MET 105
ASN 106
0.5702
ASN 106
ALA 107
0.4968
ALA 107
TRP 108
0.1413
TRP 108
VAL 109
0.3951
VAL 109
ALA 110
0.1126
ALA 110
TRP 111
0.3237
TRP 111
ARG 112
0.5757
ARG 112
ASN 113
0.1956
ASN 113
ARG 114
0.4206
ARG 114
CYS 115
0.3603
CYS 115
LYS 116
0.4405
LYS 116
GLY 117
0.3223
GLY 117
THR 118
0.4609
THR 118
ASP 119
0.4469
ASP 119
VAL 120
0.3115
VAL 120
GLN 121
0.3422
GLN 121
ALA 122
0.0471
ALA 122
TRP 123
-0.1178
TRP 123
ILE 124
0.4494
ILE 124
ARG 125
-0.0996
ARG 125
GLY 126
1.0387
GLY 126
CYS 127
0.9708
CYS 127
ARG 128
1.7880
ARG 128
LEU 129
1.7372
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.