CNRS Nantes University US2B US2B
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***  EXP_1RY2_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912181314425

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1PRO 2 0.0870
PRO 2GLY 3 0.3010
GLY 3ILE 4 -0.0930
ILE 4VAL 5 0.0396
VAL 5ARG 6 0.2879
ARG 6HIS 7 0.1473
HIS 7LEU 8 -0.1594
LEU 8ILE 9 0.1659
ILE 9ASP 10 -0.4381
ASP 10SER 11 -0.0794
SER 11VAL 12 0.0639
VAL 12LYS 13 -0.1296
LYS 13LEU 14 0.1116

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.