This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASN 1
PRO 2
0.0870
PRO 2
GLY 3
0.3010
GLY 3
ILE 4
-0.0930
ILE 4
VAL 5
0.0396
VAL 5
ARG 6
0.2879
ARG 6
HIS 7
0.1473
HIS 7
LEU 8
-0.1594
LEU 8
ILE 9
0.1659
ILE 9
ASP 10
-0.4381
ASP 10
SER 11
-0.0794
SER 11
VAL 12
0.0639
VAL 12
LYS 13
-0.1296
LYS 13
LEU 14
0.1116
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.