CNRS Nantes University US2B US2B
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***  EXP_1RY2_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912185414463

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1PRO 2 -0.0302
PRO 2GLY 3 0.0780
GLY 3ILE 4 -0.7976
ILE 4VAL 5 0.0018
VAL 5ARG 6 0.4717
ARG 6HIS 7 -0.2023
HIS 7LEU 8 -0.4417
LEU 8ILE 9 0.2586
ILE 9ASP 10 0.0129
ASP 10SER 11 -0.4884
SER 11VAL 12 0.1335
VAL 12LYS 13 0.0013
LYS 13LEU 14 -0.0724

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.