CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_3LZG_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912222218230

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1LEU 2 -0.0035
LEU 2PHE 3 0.0014
PHE 3GLY 4 -0.0003
GLY 4ALA 5 -0.0003
ALA 5ILE 6 0.0025
ILE 6ALA 7 0.0012
ALA 7GLY 8 -0.0001
GLY 8PHE 9 -0.0011
PHE 9ILE 10 0.0004
ILE 10GLU 11 -0.0005
GLU 11GLY 12 0.0005
GLY 12GLY 13 0.0002
GLY 13TRP 14 -0.0021
TRP 14THR 15 0.0052
THR 15GLY 16 0.0003
GLY 16MET 17 -0.0003
MET 17VAL 18 -0.0001
VAL 18ASP 19 0.0017
ASP 19GLY 20 -0.0008
GLY 20TRP 21 -0.0000
TRP 21TYR 22 0.0004
TYR 22GLY 23 -0.0026
GLY 23TYR 24 0.0000
TYR 24HIS 25 0.0006
HIS 25HIS 26 0.0038
HIS 26GLN 27 -0.0017
GLN 27ASN 28 0.0035
ASN 28GLU 29 0.0008
GLU 29GLN 30 0.0001
GLN 30GLY 31 0.0004
GLY 31SER 32 0.0003
SER 32GLY 33 -0.0052
GLY 33TYR 34 -0.0035
TYR 34ALA 35 -0.0007
ALA 35ALA 36 -0.0059
ALA 36ASP 37 0.0014
ASP 37LEU 38 0.0024
LEU 38LYS 39 -0.0046
LYS 39SER 40 0.0007
SER 40THR 41 0.0031
THR 41GLN 42 0.0012
GLN 42ASN 43 -0.0064
ASN 43ALA 44 0.0045
ALA 44ILE 45 0.0017
ILE 45ASP 46 -0.0044
ASP 46GLU 47 -0.0034
GLU 47ILE 48 0.0095
ILE 48THR 49 -0.0000
THR 49ASN 50 -0.0144
ASN 50LYS 51 0.0035
LYS 51VAL 52 0.0142
VAL 52ASN 53 -0.0133
ASN 53SER 54 -0.0186
SER 54VAL 55 0.0133
VAL 55ILE 56 0.0027
ILE 56GLU 57 -0.0200
GLU 57LYS 58 0.0055
LYS 58MET 59 0.0118
MET 59ASN 60 -0.0179
ASN 60THR 61 -0.0110
THR 61GLN 62 0.0077
GLN 62PHE 63 0.0095
PHE 63THR 64 -0.0220
THR 64ALA 65 -0.0156
ALA 65VAL 66 0.0198
VAL 66GLY 67 -0.0003
GLY 67LYS 68 -0.0179
LYS 68GLU 69 0.0128
GLU 69PHE 70 0.0064
PHE 70ASN 71 -0.0084
ASN 71HIS 72 -0.0054
HIS 72LEU 73 0.0032
LEU 73GLU 74 0.0008
GLU 74LYS 75 -0.0059
LYS 75ARG 76 -0.0001
ARG 76ILE 77 0.0031
ILE 77GLU 78 -0.0026
GLU 78ASN 79 -0.0015
ASN 79LEU 80 -0.0029
LEU 80ASN 81 0.0004
ASN 81LYS 82 0.0007
LYS 82LYS 83 -0.0040
LYS 83VAL 84 -0.0033
VAL 84ASP 85 -0.0005
ASP 85ASP 86 0.0029
ASP 86GLY 87 0.0014
GLY 87PHE 88 -0.0105
PHE 88LEU 89 0.0051
LEU 89ASP 90 0.0009
ASP 90ILE 91 -0.0074
ILE 91TRP 92 -0.0001
TRP 92THR 93 0.0019
THR 93TYR 94 0.0027
TYR 94ASN 95 -0.0073
ASN 95ALA 96 -0.0050
ALA 96GLU 97 0.0063
GLU 97LEU 98 -0.0065
LEU 98LEU 99 -0.0098
LEU 99VAL 100 0.0093
VAL 100LEU 101 0.0121
LEU 101LEU 102 -0.0237
LEU 102GLU 103 0.0107
GLU 103ASN 104 -0.0010
ASN 104GLU 105 -0.0112
GLU 105ARG 106 0.0234
ARG 106THR 107 0.0053
THR 107LEU 108 0.0140
LEU 108ASP 109 0.0028
ASP 109TYR 110 0.0155
TYR 110HIS 111 0.0093
HIS 111ASP 112 0.0333
ASP 112SER 113 -0.0031
SER 113ASN 114 0.0029
ASN 114VAL 115 0.0268
VAL 115LYS 116 0.0066
LYS 116ASN 117 0.0002
ASN 117LEU 118 0.0057
LEU 118TYR 119 0.0272
TYR 119GLU 120 0.0008
GLU 120LYS 121 0.0051
LYS 121VAL 122 0.0122
VAL 122ARG 123 -0.0038
ARG 123SER 124 -0.0008
SER 124GLN 125 0.0089
GLN 125LEU 126 0.0016
LEU 126LYS 127 0.0002
LYS 127ASN 128 -0.0013
ASN 128ASN 129 0.0001
ASN 129ALA 130 0.0014
ALA 130LYS 131 -0.0007
LYS 131GLU 132 0.0020
GLU 132ILE 133 -0.0025
ILE 133GLY 134 0.0001
GLY 134ASN 135 0.0024
ASN 135GLY 136 0.0018
GLY 136CYS 137 -0.0014
CYS 137PHE 138 -0.0031
PHE 138GLU 139 0.0001
GLU 139PHE 140 -0.0033
PHE 140TYR 141 -0.0008
TYR 141HIS 142 0.0008
HIS 142LYS 143 -0.0000
LYS 143CYS 144 0.0011
CYS 144ASP 145 -0.0017
ASP 145ASN 146 0.0008
ASN 146THR 147 0.0017
THR 147CYS 148 -0.0006
CYS 148MET 149 0.0004
MET 149GLU 150 -0.0006
GLU 150SER 151 0.0010
SER 151VAL 152 -0.0015
VAL 152LYS 153 0.0004
LYS 153ASN 154 -0.0028
ASN 154GLY 155 0.0022
GLY 155THR 156 0.0029
THR 156TYR 157 -0.0001
TYR 157ASP 158 -0.0009
ASP 158TYR 159 0.0005
TYR 159PRO 160 -0.0000
PRO 160LYS 161 0.0007
LYS 161TYR 162 -0.0002
TYR 162SER 163 0.0002
SER 163GLU 164 0.0001
GLU 164GLU 165 -0.0005
GLU 165ALA 166 0.0008
ALA 166LYS 167 -0.0003
LYS 167LEU 168 -0.0001
LEU 168ASN 169 -0.0000
ASN 169ARG 170 -0.0006
ARG 170GLU 171 0.0006
GLU 171GLU 172 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.