CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_3LZG_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912222218230

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1LEU 2 -0.0145
LEU 2PHE 3 -0.0004
PHE 3GLY 4 0.0003
GLY 4ALA 5 -0.0038
ALA 5ILE 6 0.0036
ILE 6ALA 7 0.0025
ALA 7GLY 8 0.0025
GLY 8PHE 9 -0.0056
PHE 9ILE 10 -0.0006
ILE 10GLU 11 0.0003
GLU 11GLY 12 0.0058
GLY 12GLY 13 -0.0005
GLY 13TRP 14 0.0056
TRP 14THR 15 0.0001
THR 15GLY 16 0.0046
GLY 16MET 17 -0.0099
MET 17VAL 18 -0.0040
VAL 18ASP 19 0.0121
ASP 19GLY 20 0.0008
GLY 20TRP 21 -0.0057
TRP 21TYR 22 -0.0060
TYR 22GLY 23 -0.0035
GLY 23TYR 24 -0.0346
TYR 24HIS 25 0.0044
HIS 25HIS 26 0.0014
HIS 26GLN 27 -0.0082
GLN 27ASN 28 0.0059
ASN 28GLU 29 -0.0039
GLU 29GLN 30 0.0054
GLN 30GLY 31 0.0060
GLY 31SER 32 0.0185
SER 32GLY 33 -0.0176
GLY 33TYR 34 -0.0124
TYR 34ALA 35 -0.0011
ALA 35ALA 36 -0.0311
ALA 36ASP 37 0.0080
ASP 37LEU 38 0.0079
LEU 38LYS 39 -0.0016
LYS 39SER 40 0.0048
SER 40THR 41 0.0122
THR 41GLN 42 -0.0002
GLN 42ASN 43 -0.0073
ASN 43ALA 44 0.0099
ALA 44ILE 45 0.0081
ILE 45ASP 46 -0.0147
ASP 46GLU 47 0.0126
GLU 47ILE 48 0.0121
ILE 48THR 49 -0.0086
THR 49ASN 50 -0.0027
ASN 50LYS 51 0.0267
LYS 51VAL 52 0.0367
VAL 52ASN 53 -0.0344
ASN 53SER 54 0.0337
SER 54VAL 55 0.0507
VAL 55ILE 56 0.0079
ILE 56GLU 57 -0.0070
GLU 57LYS 58 0.0209
LYS 58MET 59 0.0254
MET 59ASN 60 0.0080
ASN 60THR 61 0.0158
THR 61GLN 62 0.0247
GLN 62PHE 63 -0.0071
PHE 63THR 64 0.0339
THR 64ALA 65 0.0410
ALA 65VAL 66 -0.0076
VAL 66GLY 67 0.0099
GLY 67LYS 68 0.0296
LYS 68GLU 69 -0.0050
GLU 69PHE 70 -0.0064
PHE 70ASN 71 0.0184
ASN 71HIS 72 0.0174
HIS 72LEU 73 -0.0042
LEU 73GLU 74 -0.0030
GLU 74LYS 75 0.0126
LYS 75ARG 76 0.0022
ARG 76ILE 77 -0.0081
ILE 77GLU 78 0.0096
GLU 78ASN 79 0.0015
ASN 79LEU 80 -0.0026
LEU 80ASN 81 -0.0001
ASN 81LYS 82 0.0025
LYS 82LYS 83 -0.0009
LYS 83VAL 84 -0.0012
VAL 84ASP 85 0.0015
ASP 85ASP 86 -0.0066
ASP 86GLY 87 -0.0142
GLY 87PHE 88 0.0072
PHE 88LEU 89 -0.0073
LEU 89ASP 90 -0.0085
ASP 90ILE 91 0.0045
ILE 91TRP 92 0.0025
TRP 92THR 93 -0.0048
THR 93TYR 94 -0.0230
TYR 94ASN 95 0.0046
ASN 95ALA 96 -0.0077
ALA 96GLU 97 -0.0162
GLU 97LEU 98 -0.0080
LEU 98LEU 99 -0.0033
LEU 99VAL 100 -0.0250
VAL 100LEU 101 -0.0140
LEU 101LEU 102 0.0188
LEU 102GLU 103 -0.0252
GLU 103ASN 104 -0.0151
ASN 104GLU 105 0.0285
GLU 105ARG 106 -0.0330
ARG 106THR 107 -0.0245
THR 107LEU 108 0.0452
LEU 108ASP 109 -0.0107
ASP 109TYR 110 -0.0347
TYR 110HIS 111 0.0023
HIS 111ASP 112 0.0466
ASP 112SER 113 -0.0746
SER 113ASN 114 -0.0193
ASN 114VAL 115 0.0544
VAL 115LYS 116 -0.0436
LYS 116ASN 117 -0.0226
ASN 117LEU 118 0.0056
LEU 118TYR 119 0.0278
TYR 119GLU 120 -0.0398
GLU 120LYS 121 0.0095
LYS 121VAL 122 0.0379
VAL 122ARG 123 -0.0238
ARG 123SER 124 -0.0251
SER 124GLN 125 0.0284
GLN 125LEU 126 0.0033
LEU 126LYS 127 -0.0015
LYS 127ASN 128 0.0191
ASN 128ASN 129 -0.0010
ASN 129ALA 130 -0.0016
ALA 130LYS 131 -0.0072
LYS 131GLU 132 0.0105
GLU 132ILE 133 0.0051
ILE 133GLY 134 0.0008
GLY 134ASN 135 -0.0017
ASN 135GLY 136 0.0070
GLY 136CYS 137 -0.0314
CYS 137PHE 138 -0.0027
PHE 138GLU 139 -0.0147
GLU 139PHE 140 0.0018
PHE 140TYR 141 -0.0040
TYR 141HIS 142 0.0027
HIS 142LYS 143 0.0002
LYS 143CYS 144 -0.0043
CYS 144ASP 145 -0.0002
ASP 145ASN 146 0.0006
ASN 146THR 147 0.0027
THR 147CYS 148 0.0030
CYS 148MET 149 -0.0012
MET 149GLU 150 0.0093
GLU 150SER 151 0.0027
SER 151VAL 152 -0.0034
VAL 152LYS 153 0.0094
LYS 153ASN 154 -0.0064
ASN 154GLY 155 0.0003
GLY 155THR 156 -0.0048
THR 156TYR 157 -0.0012
TYR 157ASP 158 -0.0050
ASP 158TYR 159 -0.0017
TYR 159PRO 160 0.0045
PRO 160LYS 161 0.0042
LYS 161TYR 162 0.0003
TYR 162SER 163 -0.0028
SER 163GLU 164 0.0052
GLU 164GLU 165 -0.0005
GLU 165ALA 166 0.0030
ALA 166LYS 167 -0.0021
LYS 167LEU 168 0.0056
LEU 168ASN 169 -0.0008
ASN 169ARG 170 0.0004
ARG 170GLU 171 0.0022
GLU 171GLU 172 0.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.