This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASN 1
PRO 2
-0.0347
PRO 2
GLY 3
0.3000
GLY 3
ILE 4
0.4243
ILE 4
VAL 5
0.1187
VAL 5
ARG 6
-0.2080
ARG 6
HIS 7
-0.7887
HIS 7
LEU 8
0.0965
LEU 8
ILE 9
-0.1171
ILE 9
ASP 10
-0.4792
ASP 10
SER 11
0.5210
SER 11
VAL 12
-0.1685
VAL 12
LYS 13
0.0431
LYS 13
LEU 14
-0.0524
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.