Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *

CA strain for 24021912371233467

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ASP 1 GLN 2 0.0047

GLN 2 LEU 3 -0.0039

LEU 3 THR 4 0.0040

THR 4 GLU 5 -0.0011

GLU 5 GLU 6 0.0011

GLU 6 GLN 7 0.0002

GLN 7 ILE 8 0.0005

ILE 8 ALA 9 0.0010

ALA 9 GLU 10 -0.0003

GLU 10 PHE 11 -0.0028

PHE 11 LYS 12 0.0076

LYS 12 GLU 13 -0.0005

GLU 13 ALA 14 -0.0025

ALA 14 PHE 15 -0.0003

PHE 15 SER 16 -0.0012

SER 16 LEU 17 -0.0023

LEU 17 PHE 18 -0.0004

PHE 18 ASP 19 0.0007

ASP 19 LYS 20 -0.0010

LYS 20 ASP 21 -0.0004

ASP 21 GLY 22 0.0004

GLY 22 ASP 23 0.0006

ASP 23 GLY 24 -0.0017

GLY 24 THR 25 0.0012

THR 25 ILE 26 0.0007

ILE 26 THR 27 0.0008

THR 27 THR 28 0.0014

THR 28 LYS 29 -0.0010

LYS 29 GLU 30 0.0039

GLU 30 LEU 31 -0.0030

LEU 31 GLY 32 0.0003

GLY 32 THR 33 0.0008

THR 33 VAL 34 0.0023

VAL 34 MET 35 -0.0011

MET 35 ARG 36 0.0001

ARG 36 SER 37 0.0000

SER 37 LEU 38 0.0003

LEU 38 GLY 39 0.0012

GLY 39 GLN 40 -0.0006

GLN 40 ASN 41 -0.0003

ASN 41 PRO 42 0.0004

PRO 42 THR 43 -0.0010

THR 43 GLU 44 -0.0010

GLU 44 ALA 45 0.0024

ALA 45 GLU 46 -0.0001

GLU 46 LEU 47 0.0001

LEU 47 GLN 48 -0.0018

GLN 48 ASP 49 0.0035

ASP 49 MET 50 -0.0024

MET 50 ILE 51 0.0010

ILE 51 ASN 52 -0.0001

ASN 52 GLU 53 0.0008

GLU 53 VAL 54 0.0031

VAL 54 ASP 55 -0.0035

ASP 55 ALA 56 0.0007

ALA 56 ASP 57 -0.0014

ASP 57 GLY 58 0.0005

GLY 58 ASN 59 0.0013

ASN 59 GLY 60 -0.0008

GLY 60 THR 61 0.0013

THR 61 ILE 62 0.0014

ILE 62 ASP 63 0.0001

ASP 63 PHE 64 0.0021

PHE 64 PRO 65 -0.0014

PRO 65 GLU 66 0.0023

GLU 66 PHE 67 -0.0019

PHE 67 LEU 68 0.0000

LEU 68 THR 69 0.0012

THR 69 MET 70 0.0104

MET 70 MET 71 0.0022

MET 71 ALA 72 0.0028

ALA 72 ARG 73 0.0138

ARG 73 LYS 74 0.0133

LYS 74 MET 75 -0.0157

MET 75 LYS 76 0.0418

LYS 76 ASP 77 0.0170

ASP 77 THR 78 0.0094

THR 78 ASP 79 -0.0094

ASP 79 SER 80 0.0335

SER 80 GLU 81 -0.0483

GLU 81 GLU 82 0.0141

GLU 82 GLU 83 -0.0225

GLU 83 ILE 84 0.0267

ILE 84 ARG 85 0.0028

ARG 85 GLU 86 -0.0027

GLU 86 ALA 87 0.0013

ALA 87 PHE 88 0.0060

PHE 88 ARG 89 -0.0033

ARG 89 VAL 90 -0.0003

VAL 90 PHE 91 0.0013

PHE 91 ASP 92 -0.0014

ASP 92 LYS 93 -0.0005

LYS 93 ASP 94 0.0023

ASP 94 GLY 95 -0.0027

GLY 95 ASN 96 -0.0008

ASN 96 GLY 97 0.0001

GLY 97 TYR 98 -0.0012

TYR 98 ILE 99 -0.0004

ILE 99 SER 100 -0.0001

SER 100 ALA 101 -0.0029

ALA 101 ALA 102 0.0002

ALA 102 GLU 103 0.0011

GLU 103 LEU 104 -0.0021

LEU 104 ARG 105 0.0017

ARG 105 HIS 106 0.0002

HIS 106 VAL 107 0.0023

VAL 107 MET 108 0.0033

MET 108 THR 109 0.0006

THR 109 ASN 110 0.0001

ASN 110 LEU 111 0.0006

LEU 111 GLY 112 -0.0004

GLY 112 GLU 113 -0.0009

GLU 113 LYS 114 0.0007

LYS 114 LEU 115 -0.0025

LEU 115 THR 116 0.0025

THR 116 ASP 117 -0.0002

ASP 117 GLU 118 0.0002

GLU 118 GLU 119 -0.0005

GLU 119 VAL 120 0.0010

VAL 120 ASP 121 0.0004

ASP 121 GLU 122 0.0005

GLU 122 MET 123 0.0005

MET 123 ILE 124 -0.0010

ILE 124 ARG 125 0.0016

ARG 125 GLU 126 0.0002

GLU 126 ALA 127 -0.0006

ALA 127 ASP 128 0.0034

ASP 128 ILE 129 -0.0000

ILE 129 ASP 130 0.0015

ASP 130 GLY 131 -0.0013

GLY 131 ASP 132 0.0003

ASP 132 GLY 133 -0.0003

GLY 133 GLN 134 -0.0017

GLN 134 VAL 135 0.0001

VAL 135 ASN 136 -0.0024

ASN 136 TYR 137 -0.0180

TYR 137 GLU 138 0.0037

GLU 138 GLU 139 -0.0040

GLU 139 PHE 140 0.0047

PHE 140 VAL 141 -0.0030

VAL 141 GLN 142 -0.0046

GLN 142 MET 143 -0.0007

MET 143 MET 144 0.0109

MET 144 THR 145 -0.0097

THR 145 ALA 146 0.0005

ALA 146 LYS 147 -0.0209

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 ***

CA strain for 24021912371233467

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *