Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *

CA strain for 24021912371233467

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ASP 1 GLN 2 -0.0173

GLN 2 LEU 3 0.0215

LEU 3 THR 4 -0.0066

THR 4 GLU 5 0.0014

GLU 5 GLU 6 -0.0046

GLU 6 GLN 7 0.0050

GLN 7 ILE 8 0.0050

ILE 8 ALA 9 -0.0045

ALA 9 GLU 10 0.0013

GLU 10 PHE 11 -0.0001

PHE 11 LYS 12 0.0094

LYS 12 GLU 13 -0.0013

GLU 13 ALA 14 0.0007

ALA 14 PHE 15 0.0006

PHE 15 SER 16 0.0017

SER 16 LEU 17 -0.0024

LEU 17 PHE 18 0.0000

PHE 18 ASP 19 0.0015

ASP 19 LYS 20 -0.0011

LYS 20 ASP 21 -0.0016

ASP 21 GLY 22 0.0014

GLY 22 ASP 23 0.0008

ASP 23 GLY 24 -0.0020

GLY 24 THR 25 0.0020

THR 25 ILE 26 -0.0001

ILE 26 THR 27 0.0002

THR 27 THR 28 0.0011

THR 28 LYS 29 -0.0009

LYS 29 GLU 30 0.0005

GLU 30 LEU 31 0.0020

LEU 31 GLY 32 -0.0002

GLY 32 THR 33 0.0001

THR 33 VAL 34 0.0001

VAL 34 MET 35 -0.0033

MET 35 ARG 36 0.0014

ARG 36 SER 37 0.0013

SER 37 LEU 38 0.0001

LEU 38 GLY 39 0.0003

GLY 39 GLN 40 0.0003

GLN 40 ASN 41 -0.0004

ASN 41 PRO 42 0.0022

PRO 42 THR 43 -0.0017

THR 43 GLU 44 -0.0001

GLU 44 ALA 45 -0.0006

ALA 45 GLU 46 0.0005

GLU 46 LEU 47 -0.0017

LEU 47 GLN 48 0.0004

GLN 48 ASP 49 -0.0014

ASP 49 MET 50 -0.0002

MET 50 ILE 51 -0.0004

ILE 51 ASN 52 0.0007

ASN 52 GLU 53 -0.0017

GLU 53 VAL 54 0.0020

VAL 54 ASP 55 -0.0031

ASP 55 ALA 56 0.0021

ALA 56 ASP 57 -0.0036

ASP 57 GLY 58 0.0014

GLY 58 ASN 59 0.0005

ASN 59 GLY 60 -0.0006

GLY 60 THR 61 0.0010

THR 61 ILE 62 0.0018

ILE 62 ASP 63 0.0017

ASP 63 PHE 64 0.0084

PHE 64 PRO 65 -0.0068

PRO 65 GLU 66 0.0068

GLU 66 PHE 67 -0.0007

PHE 67 LEU 68 0.0010

LEU 68 THR 69 -0.0077

THR 69 MET 70 0.0097

MET 70 MET 71 -0.0057

MET 71 ALA 72 -0.0055

ALA 72 ARG 73 -0.0189

ARG 73 LYS 74 0.0395

LYS 74 MET 75 -0.0457

MET 75 LYS 76 0.0238

LYS 76 ASP 77 0.0158

ASP 77 THR 78 0.0010

THR 78 ASP 79 0.0176

ASP 79 SER 80 0.0007

SER 80 GLU 81 -0.0877

GLU 81 GLU 82 0.0116

GLU 82 GLU 83 0.0405

GLU 83 ILE 84 0.0028

ILE 84 ARG 85 0.0076

ARG 85 GLU 86 0.0024

GLU 86 ALA 87 -0.0148

ALA 87 PHE 88 0.0050

PHE 88 ARG 89 0.0028

ARG 89 VAL 90 -0.0156

VAL 90 PHE 91 -0.0016

PHE 91 ASP 92 0.0048

ASP 92 LYS 93 -0.0023

LYS 93 ASP 94 -0.0007

ASP 94 GLY 95 -0.0002

GLY 95 ASN 96 0.0035

ASN 96 GLY 97 -0.0069

GLY 97 TYR 98 -0.0004

TYR 98 ILE 99 0.0007

ILE 99 SER 100 0.0003

SER 100 ALA 101 -0.0031

ALA 101 ALA 102 0.0000

ALA 102 GLU 103 0.0015

GLU 103 LEU 104 -0.0025

LEU 104 ARG 105 0.0014

ARG 105 HIS 106 -0.0000

HIS 106 VAL 107 0.0028

VAL 107 MET 108 -0.0033

MET 108 THR 109 0.0021

THR 109 ASN 110 0.0002

ASN 110 LEU 111 -0.0008

LEU 111 GLY 112 0.0032

GLY 112 GLU 113 -0.0008

GLU 113 LYS 114 -0.0001

LYS 114 LEU 115 -0.0003

LEU 115 THR 116 0.0010

THR 116 ASP 117 -0.0015

ASP 117 GLU 118 0.0013

GLU 118 GLU 119 0.0001

GLU 119 VAL 120 -0.0021

VAL 120 ASP 121 0.0003

ASP 121 GLU 122 0.0005

GLU 122 MET 123 0.0015

MET 123 ILE 124 -0.0029

ILE 124 ARG 125 0.0017

ARG 125 GLU 126 0.0000

GLU 126 ALA 127 -0.0004

ALA 127 ASP 128 0.0071

ASP 128 ILE 129 -0.0020

ILE 129 ASP 130 -0.0001

ASP 130 GLY 131 -0.0001

GLY 131 ASP 132 0.0014

ASP 132 GLY 133 -0.0025

GLY 133 GLN 134 -0.0000

GLN 134 VAL 135 0.0038

VAL 135 ASN 136 -0.0039

ASN 136 TYR 137 -0.0163

TYR 137 GLU 138 0.0022

GLU 138 GLU 139 0.0038

GLU 139 PHE 140 -0.0017

PHE 140 VAL 141 -0.0014

VAL 141 GLN 142 0.0094

GLN 142 MET 143 -0.0043

MET 143 MET 144 0.0221

MET 144 THR 145 0.0006

THR 145 ALA 146 -0.0110

ALA 146 LYS 147 0.0519

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 ***

CA strain for 24021912371233467

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *