Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *

CA strain for 24021912371233467

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ASP 1 GLN 2 0.0082

GLN 2 LEU 3 -0.0153

LEU 3 THR 4 -0.0053

THR 4 GLU 5 0.0021

GLU 5 GLU 6 -0.0009

GLU 6 GLN 7 0.0081

GLN 7 ILE 8 0.0083

ILE 8 ALA 9 0.0004

ALA 9 GLU 10 -0.0008

GLU 10 PHE 11 0.0023

PHE 11 LYS 12 -0.0045

LYS 12 GLU 13 -0.0042

GLU 13 ALA 14 -0.0022

ALA 14 PHE 15 0.0039

PHE 15 SER 16 -0.0069

SER 16 LEU 17 0.0099

LEU 17 PHE 18 0.0029

PHE 18 ASP 19 -0.0049

ASP 19 LYS 20 0.0017

LYS 20 ASP 21 0.0026

ASP 21 GLY 22 -0.0004

GLY 22 ASP 23 -0.0027

ASP 23 GLY 24 0.0092

GLY 24 THR 25 -0.0022

THR 25 ILE 26 -0.0013

ILE 26 THR 27 0.0008

THR 27 THR 28 0.0004

THR 28 LYS 29 0.0003

LYS 29 GLU 30 -0.0054

GLU 30 LEU 31 0.0029

LEU 31 GLY 32 -0.0005

GLY 32 THR 33 -0.0006

THR 33 VAL 34 -0.0067

VAL 34 MET 35 0.0053

MET 35 ARG 36 -0.0029

ARG 36 SER 37 -0.0012

SER 37 LEU 38 -0.0000

LEU 38 GLY 39 -0.0046

GLY 39 GLN 40 0.0008

GLN 40 ASN 41 -0.0008

ASN 41 PRO 42 -0.0014

PRO 42 THR 43 0.0037

THR 43 GLU 44 0.0052

GLU 44 ALA 45 -0.0048

ALA 45 GLU 46 -0.0011

GLU 46 LEU 47 0.0036

LEU 47 GLN 48 0.0044

GLN 48 ASP 49 -0.0058

ASP 49 MET 50 0.0073

MET 50 ILE 51 0.0029

ILE 51 ASN 52 -0.0016

ASN 52 GLU 53 -0.0050

GLU 53 VAL 54 -0.0060

VAL 54 ASP 55 -0.0008

ASP 55 ALA 56 -0.0002

ALA 56 ASP 57 0.0036

ASP 57 GLY 58 -0.0004

GLY 58 ASN 59 -0.0020

ASN 59 GLY 60 0.0031

GLY 60 THR 61 -0.0008

THR 61 ILE 62 -0.0052

ILE 62 ASP 63 -0.0009

ASP 63 PHE 64 0.0066

PHE 64 PRO 65 0.0042

PRO 65 GLU 66 -0.0136

GLU 66 PHE 67 0.0113

PHE 67 LEU 68 0.0013

LEU 68 THR 69 -0.0231

THR 69 MET 70 -0.0280

MET 70 MET 71 0.0248

MET 71 ALA 72 -0.0237

ALA 72 ARG 73 -0.0478

ARG 73 LYS 74 0.0325

LYS 74 MET 75 0.0403

MET 75 LYS 76 -0.0692

LYS 76 ASP 77 -0.0114

ASP 77 THR 78 0.0376

THR 78 ASP 79 -0.0291

ASP 79 SER 80 -0.0002

SER 80 GLU 81 -0.0444

GLU 81 GLU 82 0.0129

GLU 82 GLU 83 -0.0118

GLU 83 ILE 84 -0.0506

ILE 84 ARG 85 0.0155

ARG 85 GLU 86 0.0049

GLU 86 ALA 87 0.0054

ALA 87 PHE 88 -0.0071

PHE 88 ARG 89 0.0045

ARG 89 VAL 90 0.0049

VAL 90 PHE 91 -0.0002

PHE 91 ASP 92 0.0011

ASP 92 LYS 93 0.0004

LYS 93 ASP 94 0.0022

ASP 94 GLY 95 -0.0045

GLY 95 ASN 96 -0.0010

ASN 96 GLY 97 0.0003

GLY 97 TYR 98 -0.0015

TYR 98 ILE 99 -0.0006

ILE 99 SER 100 -0.0010

SER 100 ALA 101 -0.0065

ALA 101 ALA 102 0.0022

ALA 102 GLU 103 -0.0043

GLU 103 LEU 104 -0.0001

LEU 104 ARG 105 0.0013

ARG 105 HIS 106 -0.0008

HIS 106 VAL 107 -0.0003

VAL 107 MET 108 0.0033

MET 108 THR 109 -0.0010

THR 109 ASN 110 -0.0003

ASN 110 LEU 111 0.0009

LEU 111 GLY 112 0.0007

GLY 112 GLU 113 -0.0010

GLU 113 LYS 114 0.0017

LYS 114 LEU 115 -0.0016

LEU 115 THR 116 0.0029

THR 116 ASP 117 0.0000

ASP 117 GLU 118 -0.0008

GLU 118 GLU 119 0.0000

GLU 119 VAL 120 -0.0006

VAL 120 ASP 121 0.0008

ASP 121 GLU 122 -0.0009

GLU 122 MET 123 0.0026

MET 123 ILE 124 -0.0039

ILE 124 ARG 125 0.0006

ARG 125 GLU 126 0.0013

GLU 126 ALA 127 -0.0006

ALA 127 ASP 128 0.0092

ASP 128 ILE 129 0.0003

ILE 129 ASP 130 0.0033

ASP 130 GLY 131 -0.0021

GLY 131 ASP 132 -0.0013

ASP 132 GLY 133 -0.0011

GLY 133 GLN 134 -0.0033

GLN 134 VAL 135 0.0013

VAL 135 ASN 136 -0.0031

ASN 136 TYR 137 -0.0242

TYR 137 GLU 138 0.0057

GLU 138 GLU 139 -0.0055

GLU 139 PHE 140 -0.0046

PHE 140 VAL 141 0.0009

VAL 141 GLN 142 -0.0041

GLN 142 MET 143 -0.0092

MET 143 MET 144 0.0226

MET 144 THR 145 -0.0157

THR 145 ALA 146 -0.0123

ALA 146 LYS 147 0.0350

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 ***

CA strain for 24021912371233467

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_4L79_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *