Should you encounter any unexpected behaviour,
please let us know.

* EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 *

CA strain for 24021912441443086

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLY 1 LEU 2 -0.0001

LEU 2 PHE 3 -0.0003

PHE 3 GLY 4 -0.0000

GLY 4 ALA 5 0.0002

ALA 5 ILE 6 -0.0000

ILE 6 ALA 7 0.0005

ALA 7 GLY 8 0.0000

GLY 8 PHE 9 -0.0000

PHE 9 ILE 10 0.0000

ILE 10 GLU 11 0.0001

GLU 11 ASN 12 0.0000

ASN 12 GLY 13 -0.0002

GLY 13 TRP 14 0.0005

TRP 14 GLU 15 -0.0002

GLU 15 GLY 16 0.0005

GLY 16 MET 17 0.0000

MET 17 ILE 18 -0.0003

ILE 18 ASP 19 -0.0005

ASP 19 GLY 20 0.0006

GLY 20 TRP 21 -0.0002

TRP 21 TYR 22 0.0004

TYR 22 GLY 23 0.0006

GLY 23 PHE 24 -0.0001

PHE 24 ARG 25 -0.0001

ARG 25 HIS 26 0.0002

HIS 26 GLN 27 -0.0002

GLN 27 ASN 28 0.0004

ASN 28 SER 29 0.0005

SER 29 GLU 30 0.0003

GLU 30 GLY 31 0.0002

GLY 31 THR 32 0.0002

THR 32 GLY 33 0.0009

GLY 33 GLN 34 -0.0002

GLN 34 ALA 35 0.0011

ALA 35 ALA 36 -0.0010

ALA 36 ASP 37 0.0002

ASP 37 LEU 38 0.0002

LEU 38 LYS 39 -0.0001

LYS 39 SER 40 0.0001

SER 40 THR 41 0.0004

THR 41 GLN 42 -0.0002

GLN 42 ALA 43 0.0004

ALA 43 ALA 44 0.0008

ALA 44 ILE 45 -0.0002

ILE 45 ASP 46 -0.0003

ASP 46 GLN 47 0.0002

GLN 47 ILE 48 0.0006

ILE 48 ASN 49 -0.0001

ASN 49 GLY 50 -0.0008

GLY 50 LYS 51 0.0008

LYS 51 LEU 52 0.0006

LEU 52 ASN 53 -0.0015

ASN 53 ARG 54 -0.0003

ARG 54 VAL 55 0.0023

VAL 55 ILE 56 -0.0005

ILE 56 GLU 57 -0.0002

GLU 57 LYS 58 0.0021

LYS 58 THR 59 0.0036

THR 59 ASN 60 -0.0020

ASN 60 GLU 61 0.0001

GLU 61 LYS 62 0.0031

LYS 62 PHE 63 -0.0003

PHE 63 HIS 64 -0.0017

HIS 64 GLN 65 0.0030

GLN 65 ILE 66 0.0026

ILE 66 GLU 67 -0.0022

GLU 67 LYS 68 0.0003

LYS 68 GLU 69 0.0042

GLU 69 PHE 70 0.0008

PHE 70 SER 71 -0.0051

SER 71 GLU 72 0.0069

GLU 72 VAL 73 0.0045

VAL 73 GLU 74 -0.0029

GLU 74 GLY 75 -0.0023

GLY 75 ARG 76 0.0081

ARG 76 ILE 77 -0.0004

ILE 77 GLN 78 -0.0050

GLN 78 ASP 79 0.0040

ASP 79 LEU 80 0.0098

LEU 80 GLU 81 -0.0047

GLU 81 LYS 82 -0.0014

LYS 82 TYR 83 0.0051

TYR 83 VAL 84 0.0049

VAL 84 GLU 85 -0.0031

GLU 85 ASP 86 0.0014

ASP 86 THR 87 0.0062

THR 87 LYS 88 0.0017

LYS 88 ILE 89 -0.0032

ILE 89 ASP 90 0.0007

ASP 90 LEU 91 0.0114

LEU 91 TRP 92 -0.0020

TRP 92 SER 93 -0.0020

SER 93 TYR 94 0.0099

TYR 94 ASN 95 0.0035

ASN 95 ALA 96 -0.0029

ALA 96 GLU 97 0.0023

GLU 97 LEU 98 0.0082

LEU 98 LEU 99 0.0027

LEU 99 VAL 100 -0.0035

VAL 100 ALA 101 0.0033

ALA 101 LEU 102 0.0098

LEU 102 GLU 103 -0.0032

GLU 103 ASN 104 -0.0002

ASN 104 GLN 105 0.0050

GLN 105 HIS 106 0.0063

HIS 106 THR 107 -0.0023

THR 107 ILE 108 0.0011

ILE 108 ASP 109 0.0049

ASP 109 LEU 110 0.0037

LEU 110 THR 111 -0.0007

THR 111 ASP 112 0.0012

ASP 112 SER 113 0.0086

SER 113 GLU 114 -0.0010

GLU 114 MET 115 0.0006

MET 115 ASN 116 0.0046

ASN 116 LYS 117 0.0006

LYS 117 LEU 118 -0.0003

LEU 118 PHE 119 0.0028

PHE 119 GLU 120 0.0022

GLU 120 LYS 121 0.0009

LYS 121 THR 122 0.0001

THR 122 ARG 123 0.0003

ARG 123 ARG 124 0.0002

ARG 124 GLN 125 -0.0001

GLN 125 LEU 126 -0.0002

LEU 126 ARG 127 0.0000

ARG 127 GLU 128 -0.0005

GLU 128 ASN 129 0.0001

ASN 129 ALA 130 0.0000

ALA 130 GLU 131 0.0000

GLU 131 GLU 132 -0.0005

GLU 132 MET 133 -0.0007

MET 133 GLY 134 0.0005

GLY 134 ASN 135 0.0004

ASN 135 GLY 136 -0.0006

GLY 136 CYS 137 0.0001

CYS 137 PHE 138 -0.0006

PHE 138 LYS 139 0.0004

LYS 139 ILE 140 -0.0005

ILE 140 TYR 141 -0.0003

TYR 141 HIS 142 -0.0000

HIS 142 LYS 143 0.0005

LYS 143 CYS 144 0.0005

CYS 144 ASP 145 -0.0003

ASP 145 ASN 146 0.0008

ASN 146 ALA 147 -0.0000

ALA 147 CYS 148 -0.0001

CYS 148 ILE 149 0.0003

ILE 149 GLU 150 -0.0003

GLU 150 SER 151 -0.0001

SER 151 ILE 152 -0.0006

ILE 152 ARG 153 -0.0003

ARG 153 ASN 154 -0.0003

ASN 154 GLY 155 0.0002

GLY 155 THR 156 0.0005

THR 156 TYR 157 0.0003

TYR 157 ASP 158 0.0000

ASP 158 HIS 159 -0.0000

HIS 159 ASP 160 -0.0000

ASP 160 VAL 161 0.0003

VAL 161 TYR 162 -0.0002

TYR 162 ARG 163 0.0002

ARG 163 ASP 164 -0.0003

ASP 164 GLU 165 -0.0003

GLU 165 ALA 166 0.0001

ALA 166 LEU 167 0.0003

LEU 167 ASN 168 0.0002

ASN 168 ASN 169 -0.0001

ASN 169 ARG 170 -0.0003

ARG 170 PHE 171 -0.0001

PHE 171 GLN 172 -0.0002

GLN 172 ILE 173 -0.0003

ILE 173 LYS 174 0.0004

LYS 174 GLY 175 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 ***

CA strain for 24021912441443086

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_2VIU_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000 *