CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_1RTG_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912452044392

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
THR 1PRO 2 -0.0000
PRO 2THR 3 -0.0099
THR 3LEU 4 0.0006
LEU 4GLY 5 0.0493
GLY 5PRO 6 -0.0000
PRO 6VAL 7 0.0911
VAL 7THR 8 0.0006
THR 8PRO 9 -0.0140
PRO 9GLU 10 0.0001
GLU 10ILE 11 0.0039
ILE 11CYS 12 -0.0003
CYS 12LYS 13 -0.0016
LYS 13GLN 14 0.0004
GLN 14ASP 15 -0.0024
ASP 15ILE 16 0.0003
ILE 16VAL 17 -0.0005
VAL 17PHE 18 0.0002
PHE 18ASP 19 0.0031
ASP 19GLY 20 -0.0002
GLY 20ILE 21 -0.0012
ILE 21ALA 22 -0.0001
ALA 22GLN 23 -0.0009
GLN 23ILE 24 -0.0003
ILE 24ARG 25 -0.0002
ARG 25GLY 26 0.0001
GLY 26GLU 27 0.0012
GLU 27ILE 28 0.0005
ILE 28PHE 29 -0.0007
PHE 29PHE 30 -0.0001
PHE 30PHE 31 -0.0009
PHE 31LYS 32 0.0003
LYS 32ASP 33 0.0007
ASP 33ARG 34 0.0000
ARG 34PHE 35 -0.0028
PHE 35ILE 36 0.0003
ILE 36TRP 37 -0.0003
TRP 37ARG 38 -0.0002
ARG 38THR 39 0.0010
THR 39VAL 40 0.0002
VAL 40THR 41 -0.0004
THR 41PRO 42 0.0004
PRO 42ARG 43 -0.0006
ARG 43ASP 44 0.0001
ASP 44LYS 45 0.0015
LYS 45PRO 46 0.0001
PRO 46MET 47 0.0017
MET 47GLY 48 0.0002
GLY 48PRO 49 0.0148
PRO 49LEU 50 0.0001
LEU 50LEU 51 -0.0033
LEU 51VAL 52 0.0004
VAL 52ALA 53 0.0011
ALA 53THR 54 -0.0000
THR 54PHE 55 0.0003
PHE 55TRP 56 -0.0001
TRP 56PRO 57 -0.0006
PRO 57GLU 58 0.0003
GLU 58LEU 59 0.0007
LEU 59PRO 60 -0.0001
PRO 60GLU 61 -0.0061
GLU 61LYS 62 -0.0002
LYS 62ILE 63 -0.0040
ILE 63ASP 64 -0.0001
ASP 64ALA 65 -0.0015
ALA 65VAL 66 0.0002
VAL 66TYR 67 -0.0015
TYR 67GLU 68 0.0001
GLU 68ALA 69 0.0006
ALA 69PRO 70 0.0001
PRO 70GLN 71 -0.0001
GLN 71GLU 72 0.0002
GLU 72GLU 73 0.0010
GLU 73LYS 74 -0.0003
LYS 74ALA 75 0.0004
ALA 75VAL 76 0.0000
VAL 76PHE 77 -0.0006
PHE 77PHE 78 -0.0003
PHE 78ALA 79 -0.0008
ALA 79GLY 80 -0.0001
GLY 80ASN 81 -0.0012
ASN 81GLU 82 0.0005
GLU 82TYR 83 0.0004
TYR 83TRP 84 -0.0003
TRP 84ILE 85 -0.0001
ILE 85TYR 86 -0.0001
TYR 86SER 87 -0.0004
SER 87ALA 88 0.0001
ALA 88SER 89 0.0008
SER 89THR 90 0.0003
THR 90LEU 91 0.0003
LEU 91GLU 92 0.0000
GLU 92ARG 93 -0.0002
ARG 93GLY 94 0.0003
GLY 94TYR 95 -0.0001
TYR 95PRO 96 0.0001
PRO 96LYS 97 -0.0005
LYS 97PRO 98 -0.0001
PRO 98LEU 99 0.0006
LEU 99THR 100 0.0004
THR 100SER 101 0.0004
SER 101LEU 102 -0.0001
LEU 102GLY 103 0.0003
GLY 103LEU 104 -0.0001
LEU 104PRO 105 -0.0003
PRO 105PRO 106 0.0001
PRO 106ASP 107 -0.0001
ASP 107VAL 108 0.0003
VAL 108GLN 109 -0.0006
GLN 109ARG 110 0.0004
ARG 110VAL 111 0.0006
VAL 111ASP 112 0.0003
ASP 112ALA 113 0.0002
ALA 113ALA 114 -0.0004
ALA 114PHE 115 -0.0003
PHE 115ASN 116 0.0000
ASN 116TRP 117 -0.0005
TRP 117SER 118 0.0003
SER 118LYS 119 0.0007
LYS 119ASN 120 0.0000
ASN 120LYS 121 -0.0002
LYS 121LYS 122 -0.0002
LYS 122THR 123 -0.0002
THR 123TYR 124 -0.0000
TYR 124ILE 125 -0.0003
ILE 125PHE 126 0.0001
PHE 126ALA 127 0.0007
ALA 127GLY 128 -0.0003
GLY 128ASP 129 -0.0004
ASP 129LYS 130 0.0002
LYS 130PHE 131 0.0004
PHE 131TRP 132 -0.0001
TRP 132ARG 133 0.0001
ARG 133TYR 134 -0.0005
TYR 134ASN 135 0.0002
ASN 135GLU 136 0.0001
GLU 136VAL 137 0.0000
VAL 137LYS 138 0.0002
LYS 138LYS 139 -0.0005
LYS 139LYS 140 0.0001
LYS 140MET 141 0.0000
MET 141ASP 142 -0.0000
ASP 142PRO 143 0.0003
PRO 143GLY 144 0.0003
GLY 144PHE 145 -0.0005
PHE 145PRO 146 0.0002
PRO 146LYS 147 -0.0001
LYS 147LEU 148 0.0000
LEU 148ILE 149 0.0001
ILE 149ALA 150 -0.0003
ALA 150ASP 151 -0.0004
ASP 151ALA 152 -0.0005
ALA 152TRP 153 0.0003
TRP 153ASN 154 -0.0001
ASN 154ALA 155 -0.0002
ALA 155ILE 156 0.0003
ILE 156PRO 157 -0.0002
PRO 157ASP 158 0.0002
ASP 158ASN 159 -0.0007
ASN 159LEU 160 -0.0001
LEU 160ASP 161 -0.0033
ASP 161ALA 162 -0.0002
ALA 162VAL 163 -0.0011
VAL 163VAL 164 0.0001
VAL 164ASP 165 -0.0003
ASP 165LEU 166 -0.0004
LEU 166GLN 167 -0.0011
GLN 167GLY 168 0.0002
GLY 168GLY 169 -0.0009
GLY 169GLY 170 0.0000
GLY 170HIS 171 -0.0002
HIS 171SER 172 -0.0000
SER 172TYR 173 -0.0002
TYR 173PHE 174 -0.0004
PHE 174PHE 175 -0.0011
PHE 175LYS 176 0.0002
LYS 176GLY 177 -0.0026
GLY 177ALA 178 -0.0002
ALA 178TYR 179 -0.0020
TYR 179TYR 180 -0.0002
TYR 180LEU 181 -0.0012
LEU 181LYS 182 0.0001
LYS 182LEU 183 -0.0006
LEU 183GLU 184 0.0002
GLU 184ASN 185 -0.0008
ASN 185GLN 186 -0.0002
GLN 186SER 187 0.0000
SER 187LEU 188 0.0001
LEU 188LYS 189 -0.0004
LYS 189SER 190 0.0001
SER 190VAL 191 0.0012
VAL 191LYS 192 0.0002
LYS 192PHE 193 -0.0019
PHE 193GLY 194 0.0000
GLY 194SER 195 -0.0007
SER 195ILE 196 -0.0001
ILE 196LYS 197 0.0002
LYS 197SER 198 0.0000
SER 198ASP 199 -0.0015
ASP 199TRP 200 -0.0003
TRP 200LEU 201 0.0020
LEU 201GLY 202 0.0000
GLY 202CYS 203 -0.0010

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.