CNRS Nantes University US2B US2B
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***  EXP_1Q9C_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912482947563

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1HIS 2 0.0075
HIS 2GLN 3 -0.0118
GLN 3ASP 4 0.0181
ASP 4VAL 5 0.0199
VAL 5GLU 6 0.1166
GLU 6ASP 7 0.1629
ASP 7ILE 8 -0.2687

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.