Should you encounter any unexpected behaviour,
please let us know.

* EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 *

CA strain for 24021912510351363

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 1 GLU 2 -0.0008

GLU 2 ALA 3 0.1252

ALA 3 GLU 4 -0.0001

GLU 4 PHE 5 -0.2651

PHE 5 ASN 6 -0.0002

ASN 6 ASN 7 0.0487

ASN 7 TYR 8 0.0001

TYR 8 CYS 9 0.1374

CYS 9 LYS 10 -0.0000

LYS 10 ILE 11 0.1490

ILE 11 LYS 12 0.0001

LYS 12 CYS 13 0.0152

CYS 13 LEU 14 -0.0004

LEU 14 LYS 15 0.0576

LYS 15 GLY 16 -0.0000

GLY 16 GLY 17 -0.0325

GLY 17 VAL 18 -0.0000

VAL 18 HIS 19 0.0978

HIS 19 THR 20 -0.0002

THR 20 ALA 21 -0.1776

ALA 21 CYS 22 -0.0002

CYS 22 LYS 23 -0.2158

LYS 23 TYR 24 0.0001

TYR 24 GLY 25 -0.4264

GLY 25 SER 26 0.0001

SER 26 LEU 27 0.1307

LEU 27 LYS 28 -0.0002

LYS 28 PRO 29 -0.2115

PRO 29 ASN 30 0.0001

ASN 30 CYS 31 -0.4597

CYS 31 GLY 32 0.0003

GLY 32 ASN 33 -0.2514

ASN 33 LYS 34 -0.0000

LYS 34 VAL 35 -0.0645

VAL 35 VAL 36 0.0000

VAL 36 VAL 37 0.0120

VAL 37 SER 38 0.0002

SER 38 TYR 39 0.0497

TYR 39 GLY 40 -0.0000

GLY 40 LEU 41 -0.1038

LEU 41 THR 42 0.0001

THR 42 LYS 43 0.0102

LYS 43 GLN 44 0.0001

GLN 44 GLU 45 -0.0041

GLU 45 LYS 46 0.0001

LYS 46 GLN 47 0.0199

GLN 47 ASP 48 0.0003

ASP 48 ILE 49 -0.0524

ILE 49 LEU 50 0.0000

LEU 50 LYS 51 0.0525

LYS 51 GLU 52 0.0003

GLU 52 HIS 53 0.0535

HIS 53 ASN 54 0.0002

ASN 54 ASP 55 0.0126

ASP 55 PHE 56 -0.0002

PHE 56 ARG 57 0.0307

ARG 57 GLN 58 -0.0000

GLN 58 LYS 59 0.0106

LYS 59 ILE 60 -0.0000

ILE 60 ALA 61 0.0006

ALA 61 ARG 62 -0.0002

ARG 62 GLY 63 0.0130

GLY 63 LEU 64 -0.0002

LEU 64 GLU 65 0.0196

GLU 65 THR 66 -0.0003

THR 66 ARG 67 0.0262

ARG 67 GLY 68 0.0002

GLY 68 ASN 69 -0.0177

ASN 69 PRO 70 0.0003

PRO 70 GLY 71 0.0175

GLY 71 PRO 72 0.0001

PRO 72 GLN 73 0.0425

GLN 73 PRO 74 -0.0000

PRO 74 PRO 75 -0.0199

PRO 75 ALA 76 0.0000

ALA 76 LYS 77 -0.0356

LYS 77 ASN 78 -0.0002

ASN 78 MET 79 0.0439

MET 79 LYS 80 -0.0003

LYS 80 ASN 81 0.1016

ASN 81 LEU 82 -0.0001

LEU 82 VAL 83 0.0885

VAL 83 TRP 84 -0.0000

TRP 84 ASN 85 0.1564

ASN 85 ASP 86 0.0001

ASP 86 GLU 87 0.0581

GLU 87 LEU 88 0.0001

LEU 88 ALA 89 -0.1109

ALA 89 TYR 90 0.0001

TYR 90 VAL 91 -0.0674

VAL 91 ALA 92 -0.0002

ALA 92 GLN 93 -0.0176

GLN 93 VAL 94 -0.0002

VAL 94 TRP 95 -0.0878

TRP 95 ALA 96 -0.0004

ALA 96 ASN 97 0.0488

ASN 97 GLN 98 0.0000

GLN 98 CYS 99 -0.3746

CYS 99 GLN 100 0.0002

GLN 100 TYR 101 0.0942

TYR 101 GLY 102 0.0000

GLY 102 HIS 103 -0.0420

HIS 103 ASP 104 0.0000

ASP 104 THR 105 0.1370

THR 105 CYS 106 0.0004

CYS 106 ARG 107 -0.0110

ARG 107 ASP 108 -0.0002

ASP 108 VAL 109 -0.0772

VAL 109 ALA 110 -0.0001

ALA 110 LYS 111 0.3622

LYS 111 TYR 112 -0.0001

TYR 112 GLN 113 -0.1031

GLN 113 VAL 114 0.0002

VAL 114 GLY 115 0.1062

GLY 115 GLN 116 0.0003

GLN 116 ASN 117 0.0509

ASN 117 VAL 118 -0.0001

VAL 118 ALA 119 -0.0132

ALA 119 LEU 120 0.0001

LEU 120 THR 121 -0.2523

THR 121 GLY 122 -0.0001

GLY 122 SER 123 -0.1628

SER 123 THR 124 0.0002

THR 124 ALA 125 -0.0134

ALA 125 ALA 126 0.0000

ALA 126 LYS 127 -0.0107

LYS 127 TYR 128 -0.0001

TYR 128 ASP 129 -0.0076

ASP 129 ASP 130 0.0002

ASP 130 PRO 131 0.0450

PRO 131 VAL 132 -0.0000

VAL 132 LYS 133 0.1302

LYS 133 LEU 134 0.0000

LEU 134 VAL 135 0.0950

VAL 135 LYS 136 -0.0001

LYS 136 MET 137 0.0600

MET 137 TRP 138 0.0000

TRP 138 GLU 139 0.0170

GLU 139 ASP 140 0.0002

ASP 140 GLU 141 -0.0572

GLU 141 VAL 142 0.0004

VAL 142 LYS 143 0.0288

LYS 143 ASP 144 -0.0000

ASP 144 TYR 145 -0.0141

TYR 145 ASN 146 -0.0001

ASN 146 PRO 147 -0.0427

PRO 147 LYS 148 0.0004

LYS 148 LYS 149 0.0292

LYS 149 LYS 150 0.0005

LYS 150 PHE 151 0.0816

PHE 151 SER 152 0.0002

SER 152 GLY 153 -0.0345

GLY 153 ASN 154 -0.0000

ASN 154 ASP 155 -0.0286

ASP 155 PHE 156 -0.0002

PHE 156 LEU 157 -0.0074

LEU 157 LYS 158 0.0003

LYS 158 THR 159 0.0216

THR 159 GLY 160 -0.0001

GLY 160 HIS 161 -0.0235

HIS 161 TYR 162 0.0001

TYR 162 THR 163 -0.0049

THR 163 GLN 164 -0.0002

GLN 164 MET 165 -0.0249

MET 165 VAL 166 -0.0003

VAL 166 TRP 167 0.0151

TRP 167 ALA 168 -0.0003

ALA 168 ASN 169 0.0672

ASN 169 THR 170 0.0000

THR 170 LYS 171 0.0357

LYS 171 GLU 172 0.0005

GLU 172 VAL 173 -0.0483

VAL 173 GLY 174 0.0001

GLY 174 CYS 175 -0.0214

CYS 175 GLY 176 -0.0000

GLY 176 SER 177 -0.0307

SER 177 ILE 178 -0.0002

ILE 178 LYS 179 0.0274

LYS 179 TYR 180 0.0003

TYR 180 ILE 181 -0.0518

ILE 181 GLN 182 -0.0003

GLN 182 GLU 183 -0.2198

GLU 183 LYS 184 -0.0002

LYS 184 TRP 185 0.0730

TRP 185 HIS 186 0.0004

HIS 186 LYS 187 -0.0425

LYS 187 HIS 188 0.0001

HIS 188 TYR 189 -0.1238

TYR 189 LEU 190 0.0002

LEU 190 VAL 191 0.0150

VAL 191 CYS 192 -0.0004

CYS 192 ASN 193 0.0097

ASN 193 TYR 194 -0.0003

TYR 194 GLY 195 0.0017

GLY 195 PRO 196 -0.0003

PRO 196 SER 197 0.0468

SER 197 GLY 198 -0.0000

GLY 198 ASN 199 0.1672

ASN 199 PHE 200 0.0001

PHE 200 LYS 201 0.1591

LYS 201 ASN 202 -0.0002

ASN 202 GLU 203 -0.0556

GLU 203 GLU 204 -0.0002

GLU 204 LEU 205 -0.0135

LEU 205 TYR 206 -0.0000

TYR 206 GLN 207 0.0205

GLN 207 THR 208 0.0003

THR 208 LYS 209 -0.0020

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 ***

CA strain for 24021912510351363

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* EXP_1QNX_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000 *