CNRS Nantes University US2B US2B
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***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220085659142820

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN 1VAL 2 -0.0001
VAL 2TYR 3 0.0730
TYR 3ASN 4 -0.0001
ASN 4ILE 5 0.0863
ILE 5THR 6 -0.0003
THR 6TRP 7 0.0801
TRP 7GLU 8 0.0000
GLU 8VAL 9 0.0357
VAL 9THR 10 -0.0006
THR 10ASN 11 0.1454
ASN 11GLY 12 0.0000
GLY 12ASP 13 -0.0975
ASP 13ARG 14 -0.0000
ARG 14GLU 15 -0.1064
GLU 15THR 16 -0.0002
THR 16VAL 17 0.0178
VAL 17TRP 18 -0.0002
TRP 18ALA 19 -0.0338
ALA 19ILE 20 -0.0001
ILE 20SER 21 -0.0195
SER 21GLY 22 0.0001
GLY 22ASN 23 0.0722
ASN 23HIS 24 -0.0001
HIS 24PRO 25 -0.0472
PRO 25LEU 26 -0.0001
LEU 26TRP 27 -0.1454
TRP 27THR 28 -0.0002
THR 28TRP 29 -0.1340
TRP 29TRP 30 -0.0003
TRP 30PRO 31 -0.3573
PRO 31VAL 32 0.0002
VAL 32LEU 33 -0.0001
LEU 33THR 34 0.0002
THR 34PRO 35 -0.0983
PRO 35ASP 36 -0.0000
ASP 36LEU 37 -0.0646
LEU 37CYS 38 0.0003
CYS 38MET 39 -0.0006
MET 39LEU 40 0.0003
LEU 40ALA 41 0.0327
ALA 41LEU 42 -0.0003
LEU 42SER 43 -0.0107
SER 43GLY 44 0.0004
GLY 44PRO 45 0.0704
PRO 45PRO 46 -0.0000
PRO 46HIS 47 -0.0306
HIS 47TRP 48 0.0001
TRP 48GLY 49 -0.0033
GLY 49LEU 50 0.0002
LEU 50GLU 51 0.0570
GLU 51TYR 52 0.0001
TYR 52GLN 53 0.0108
GLN 53ALA 54 -0.0001
ALA 54PRO 55 0.0848
PRO 55TYR 56 -0.0001
TYR 56SER 57 -0.0991
SER 57SER 58 0.0001
SER 58PRO 59 -0.0379
PRO 59PRO 60 -0.0002
PRO 60GLY 61 0.1137
GLY 61PRO 62 0.0001
PRO 62PRO 63 -0.0580
PRO 63CYS 64 0.0000
CYS 64CYS 65 -0.0023
CYS 65SER 66 0.0002
SER 66GLY 67 -0.0230
GLY 67SER 68 -0.0000
SER 68SER 69 0.0658
SER 69GLY 70 0.0001
GLY 70SER 71 -0.0228
SER 71SER 72 0.0003
SER 72ALA 73 -0.0138
ALA 73GLY 74 -0.0002
GLY 74CYS 75 0.0500
CYS 75SER 76 -0.0002
SER 76ARG 77 -0.0036
ARG 77ASP 78 0.0001
ASP 78CYS 79 -0.0236
CYS 79ASP 80 -0.0002
ASP 80GLU 81 0.0806
GLU 81PRO 82 0.0001
PRO 82LEU 83 -0.0414
LEU 83THR 84 0.0003
THR 84SER 85 0.1655
SER 85LEU 86 0.0003
LEU 86THR 87 0.0090
THR 87PRO 88 0.0001
PRO 88ARG 89 -0.0001
ARG 89CYS 90 0.0003
CYS 90ASN 91 0.0075
ASN 91THR 92 -0.0002
THR 92ALA 93 0.0276
ALA 93TRP 94 0.0002
TRP 94ASN 95 0.0926
ASN 95ARG 96 -0.0002
ARG 96LEU 97 0.0095
LEU 97LYS 98 -0.0001
LYS 98LEU 99 -0.0599
LEU 99ASP 100 0.0003
ASP 100GLN 101 0.0000
GLN 101VAL 102 -0.0004
VAL 102THR 103 -0.0755
THR 103HIS 104 -0.0001
HIS 104LYS 105 0.0640
LYS 105SER 106 -0.0006
SER 106SER 107 -0.0134
SER 107GLU 108 0.0000
GLU 108GLY 109 -0.0661
GLY 109PHE 110 -0.0001
PHE 110TYR 111 0.0123
TYR 111VAL 112 0.0005
VAL 112CYS 113 -0.0216
CYS 113PRO 114 -0.0002
PRO 114GLY 115 -0.0130
GLY 115SER 116 0.0000
SER 116HIS 117 0.0331
HIS 117ARG 118 -0.0001
ARG 118PRO 119 0.2801
PRO 119ARG 120 -0.0004
ARG 120GLU 121 -0.0589
GLU 121ALA 122 0.0003
ALA 122LYS 123 -0.0945
LYS 123SER 124 0.0001
SER 124CYS 125 0.0054
CYS 125GLY 126 0.0003
GLY 126GLY 127 -0.0676
GLY 127PRO 128 -0.0000
PRO 128ASP 129 0.0335
ASP 129SER 130 -0.0001
SER 130PHE 131 0.0508
PHE 131TYR 132 0.0003
TYR 132CYS 133 -0.0071
CYS 133ALA 134 -0.0000
ALA 134SER 135 -0.0610
SER 135TRP 136 -0.0001
TRP 136GLY 137 0.0301
GLY 137CYS 138 0.0000
CYS 138GLU 139 -0.0551
GLU 139THR 140 -0.0002
THR 140THR 141 -0.0970
THR 141GLY 142 -0.0002
GLY 142ARG 143 -0.1393
ARG 143VAL 144 0.0001
VAL 144TYR 145 0.0363
TYR 145TRP 146 -0.0003
TRP 146LYS 147 -0.0220
LYS 147PRO 148 -0.0000
PRO 148SER 149 -0.0629
SER 149SER 150 -0.0000
SER 150SER 151 0.0167
SER 151TRP 152 -0.0002
TRP 152ASP 153 -0.0226
ASP 153TYR 154 -0.0001
TYR 154ILE 155 -0.1293
ILE 155THR 156 -0.0003
THR 156VAL 157 -0.2125
VAL 157ASP 158 0.0000
ASP 158ASN 159 -0.1996
ASN 159ASN 160 -0.0000
ASN 160LEU 161 -0.3906
LEU 161THR 162 -0.0000
THR 162THR 163 -0.0988
THR 163SER 164 0.0002
SER 164GLN 165 0.0289
GLN 165ALA 166 -0.0005
ALA 166VAL 167 -0.0698
VAL 167GLN 168 0.0002
GLN 168VAL 169 -0.0532
VAL 169CYS 170 0.0001
CYS 170LYS 171 -0.0041
LYS 171ASP 172 0.0001
ASP 172ASN 173 -0.0007
ASN 173LYS 174 0.0002
LYS 174TRP 175 -0.1329
TRP 175CYS 176 -0.0000
CYS 176ASN 177 -0.0521
ASN 177PRO 178 -0.0002
PRO 178LEU 179 -0.2379
LEU 179ALA 180 0.0001
ALA 180ILE 181 -0.3003
ILE 181GLN 182 0.0003
GLN 182PHE 183 -0.2618
PHE 183THR 184 0.0001
THR 184ASN 185 -0.1079
ASN 185ALA 186 -0.0001
ALA 186GLY 187 0.0124
GLY 187LYS 188 -0.0002
LYS 188GLN 189 -0.0572
GLN 189VAL 190 -0.0000
VAL 190THR 191 -0.0147
THR 191SER 192 0.0004
SER 192TRP 193 -0.0858
TRP 193THR 194 0.0001
THR 194THR 195 0.0938
THR 195GLY 196 0.0003
GLY 196HIS 197 0.0632
HIS 197TYR 198 -0.0002
TYR 198TRP 199 0.1023
TRP 199GLY 200 -0.0005
GLY 200LEU 201 0.0880
LEU 201ARG 202 -0.0002
ARG 202LEU 203 0.1162
LEU 203TYR 204 -0.0001
TYR 204VAL 205 -0.0516
VAL 205SER 206 0.0002
SER 206GLY 207 0.1694
GLY 207ARG 208 -0.0000
ARG 208ASP 209 -0.0763
ASP 209PRO 210 0.0002
PRO 210GLY 211 0.0382
GLY 211LEU 212 -0.0001
LEU 212THR 213 0.2009
THR 213PHE 214 0.0002
PHE 214GLY 215 0.1552
GLY 215ILE 216 0.0001
ILE 216ARG 217 0.0381
ARG 217LEU 218 -0.0000
LEU 218ARG 219 0.0038
ARG 219TYR 220 -0.0000
TYR 220GLN 221 -0.0441
GLN 221ASN 222 -0.0000
ASN 222LEU 223 -0.1238
LEU 223GLY 224 -0.0001
GLY 224PRO 225 0.1440
PRO 225ARG 226 0.0002
ARG 226VAL 227 0.2000
VAL 227PRO 228 0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.