CNRS Nantes University US2B US2B
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***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220085659142820

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN 1VAL 2 -0.0002
VAL 2TYR 3 -0.1176
TYR 3ASN 4 0.0001
ASN 4ILE 5 -0.0246
ILE 5THR 6 -0.0003
THR 6TRP 7 -0.1139
TRP 7GLU 8 -0.0000
GLU 8VAL 9 -0.1196
VAL 9THR 10 -0.0002
THR 10ASN 11 -0.0715
ASN 11GLY 12 -0.0001
GLY 12ASP 13 0.0608
ASP 13ARG 14 0.0002
ARG 14GLU 15 -0.0082
GLU 15THR 16 -0.0001
THR 16VAL 17 -0.0738
VAL 17TRP 18 -0.0004
TRP 18ALA 19 -0.1393
ALA 19ILE 20 0.0002
ILE 20SER 21 -0.3025
SER 21GLY 22 0.0003
GLY 22ASN 23 -0.0708
ASN 23HIS 24 -0.0003
HIS 24PRO 25 -0.0264
PRO 25LEU 26 0.0001
LEU 26TRP 27 0.2325
TRP 27THR 28 0.0000
THR 28TRP 29 -0.0933
TRP 29TRP 30 -0.0004
TRP 30PRO 31 0.0401
PRO 31VAL 32 -0.0002
VAL 32LEU 33 0.0807
LEU 33THR 34 0.0002
THR 34PRO 35 0.1216
PRO 35ASP 36 -0.0002
ASP 36LEU 37 -0.0483
LEU 37CYS 38 0.0001
CYS 38MET 39 -0.0386
MET 39LEU 40 -0.0001
LEU 40ALA 41 -0.0205
ALA 41LEU 42 -0.0003
LEU 42SER 43 -0.0204
SER 43GLY 44 0.0003
GLY 44PRO 45 0.0437
PRO 45PRO 46 0.0002
PRO 46HIS 47 0.0768
HIS 47TRP 48 -0.0005
TRP 48GLY 49 -0.0686
GLY 49LEU 50 0.0002
LEU 50GLU 51 -0.0492
GLU 51TYR 52 0.0001
TYR 52GLN 53 0.0225
GLN 53ALA 54 0.0000
ALA 54PRO 55 0.0135
PRO 55TYR 56 0.0001
TYR 56SER 57 0.0266
SER 57SER 58 0.0000
SER 58PRO 59 -0.0027
PRO 59PRO 60 -0.0001
PRO 60GLY 61 -0.0685
GLY 61PRO 62 -0.0001
PRO 62PRO 63 0.0916
PRO 63CYS 64 -0.0004
CYS 64CYS 65 0.0026
CYS 65SER 66 0.0004
SER 66GLY 67 0.1428
GLY 67SER 68 -0.0001
SER 68SER 69 -0.1531
SER 69GLY 70 -0.0001
GLY 70SER 71 0.0370
SER 71SER 72 -0.0001
SER 72ALA 73 -0.0152
ALA 73GLY 74 -0.0003
GLY 74CYS 75 -0.0450
CYS 75SER 76 -0.0000
SER 76ARG 77 0.0956
ARG 77ASP 78 -0.0000
ASP 78CYS 79 0.0203
CYS 79ASP 80 0.0001
ASP 80GLU 81 -0.0659
GLU 81PRO 82 0.0000
PRO 82LEU 83 0.0017
LEU 83THR 84 -0.0002
THR 84SER 85 -0.1017
SER 85LEU 86 -0.0000
LEU 86THR 87 -0.0704
THR 87PRO 88 0.0002
PRO 88ARG 89 -0.0859
ARG 89CYS 90 0.0001
CYS 90ASN 91 -0.0485
ASN 91THR 92 0.0001
THR 92ALA 93 -0.0781
ALA 93TRP 94 -0.0002
TRP 94ASN 95 -0.0657
ASN 95ARG 96 -0.0001
ARG 96LEU 97 -0.0121
LEU 97LYS 98 0.0002
LYS 98LEU 99 -0.0193
LEU 99ASP 100 -0.0002
ASP 100GLN 101 -0.0116
GLN 101VAL 102 -0.0004
VAL 102THR 103 0.0056
THR 103HIS 104 0.0004
HIS 104LYS 105 -0.0509
LYS 105SER 106 0.0003
SER 106SER 107 -0.0232
SER 107GLU 108 0.0001
GLU 108GLY 109 -0.0488
GLY 109PHE 110 0.0002
PHE 110TYR 111 0.0610
TYR 111VAL 112 0.0002
VAL 112CYS 113 0.0499
CYS 113PRO 114 -0.0001
PRO 114GLY 115 0.0269
GLY 115SER 116 -0.0003
SER 116HIS 117 -0.0819
HIS 117ARG 118 -0.0002
ARG 118PRO 119 0.3714
PRO 119ARG 120 -0.0000
ARG 120GLU 121 -0.0995
GLU 121ALA 122 0.0001
ALA 122LYS 123 -0.0246
LYS 123SER 124 -0.0001
SER 124CYS 125 -0.0419
CYS 125GLY 126 0.0001
GLY 126GLY 127 0.0119
GLY 127PRO 128 -0.0002
PRO 128ASP 129 0.0088
ASP 129SER 130 0.0002
SER 130PHE 131 -0.0698
PHE 131TYR 132 0.0001
TYR 132CYS 133 0.0775
CYS 133ALA 134 -0.0001
ALA 134SER 135 0.0482
SER 135TRP 136 0.0003
TRP 136GLY 137 -0.0194
GLY 137CYS 138 0.0001
CYS 138GLU 139 -0.0050
GLU 139THR 140 -0.0005
THR 140THR 141 0.1360
THR 141GLY 142 -0.0001
GLY 142ARG 143 0.1330
ARG 143VAL 144 0.0001
VAL 144TYR 145 -0.0504
TYR 145TRP 146 0.0001
TRP 146LYS 147 -0.0112
LYS 147PRO 148 0.0001
PRO 148SER 149 0.0082
SER 149SER 150 0.0000
SER 150SER 151 0.0812
SER 151TRP 152 -0.0000
TRP 152ASP 153 -0.0178
ASP 153TYR 154 -0.0002
TYR 154ILE 155 0.1196
ILE 155THR 156 -0.0001
THR 156VAL 157 0.2111
VAL 157ASP 158 -0.0000
ASP 158ASN 159 0.2522
ASN 159ASN 160 0.0001
ASN 160LEU 161 0.1411
LEU 161THR 162 -0.0001
THR 162THR 163 -0.0472
THR 163SER 164 -0.0002
SER 164GLN 165 -0.0072
GLN 165ALA 166 0.0001
ALA 166VAL 167 0.0262
VAL 167GLN 168 0.0001
GLN 168VAL 169 -0.0400
VAL 169CYS 170 -0.0005
CYS 170LYS 171 0.0106
LYS 171ASP 172 -0.0004
ASP 172ASN 173 -0.0668
ASN 173LYS 174 0.0001
LYS 174TRP 175 0.1222
TRP 175CYS 176 0.0001
CYS 176ASN 177 0.1131
ASN 177PRO 178 -0.0001
PRO 178LEU 179 0.2260
LEU 179ALA 180 0.0001
ALA 180ILE 181 0.2218
ILE 181GLN 182 0.0002
GLN 182PHE 183 0.1079
PHE 183THR 184 0.0001
THR 184ASN 185 0.0377
ASN 185ALA 186 0.0001
ALA 186GLY 187 -0.0196
GLY 187LYS 188 -0.0001
LYS 188GLN 189 -0.0230
GLN 189VAL 190 0.0005
VAL 190THR 191 0.0279
THR 191SER 192 0.0003
SER 192TRP 193 -0.0368
TRP 193THR 194 0.0002
THR 194THR 195 0.0499
THR 195GLY 196 -0.0002
GLY 196HIS 197 0.0651
HIS 197TYR 198 0.0000
TYR 198TRP 199 0.0757
TRP 199GLY 200 0.0003
GLY 200LEU 201 0.0418
LEU 201ARG 202 0.0004
ARG 202LEU 203 -0.0469
LEU 203TYR 204 -0.0003
TYR 204VAL 205 -0.0814
VAL 205SER 206 -0.0000
SER 206GLY 207 -0.0808
GLY 207ARG 208 0.0000
ARG 208ASP 209 0.0428
ASP 209PRO 210 0.0002
PRO 210GLY 211 0.1167
GLY 211LEU 212 0.0000
LEU 212THR 213 -0.0398
THR 213PHE 214 -0.0004
PHE 214GLY 215 -0.0160
GLY 215ILE 216 0.0002
ILE 216ARG 217 -0.0148
ARG 217LEU 218 0.0001
LEU 218ARG 219 -0.0366
ARG 219TYR 220 -0.0002
TYR 220GLN 221 -0.2667
GLN 221ASN 222 0.0001
ASN 222LEU 223 -0.1867
LEU 223GLY 224 -0.0002
GLY 224PRO 225 -0.3652
PRO 225ARG 226 0.0002
ARG 226VAL 227 0.0796
VAL 227PRO 228 -0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.