CNRS Nantes University US2B US2B
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***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220085659142820

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN 1VAL 2 -0.0003
VAL 2TYR 3 0.0260
TYR 3ASN 4 0.0001
ASN 4ILE 5 -0.0077
ILE 5THR 6 -0.0002
THR 6TRP 7 0.0089
TRP 7GLU 8 -0.0002
GLU 8VAL 9 0.0144
VAL 9THR 10 0.0003
THR 10ASN 11 -0.0161
ASN 11GLY 12 0.0002
GLY 12ASP 13 0.0332
ASP 13ARG 14 -0.0002
ARG 14GLU 15 0.0050
GLU 15THR 16 0.0002
THR 16VAL 17 0.0003
VAL 17TRP 18 -0.0001
TRP 18ALA 19 0.0461
ALA 19ILE 20 0.0001
ILE 20SER 21 0.0044
SER 21GLY 22 0.0004
GLY 22ASN 23 -0.0193
ASN 23HIS 24 -0.0001
HIS 24PRO 25 0.0164
PRO 25LEU 26 -0.0005
LEU 26TRP 27 -0.0076
TRP 27THR 28 0.0002
THR 28TRP 29 0.0366
TRP 29TRP 30 -0.0003
TRP 30PRO 31 0.0533
PRO 31VAL 32 0.0004
VAL 32LEU 33 0.0128
LEU 33THR 34 -0.0000
THR 34PRO 35 0.0256
PRO 35ASP 36 0.0000
ASP 36LEU 37 0.0133
LEU 37CYS 38 -0.0000
CYS 38MET 39 0.0071
MET 39LEU 40 0.0004
LEU 40ALA 41 -0.0190
ALA 41LEU 42 -0.0000
LEU 42SER 43 0.0057
SER 43GLY 44 -0.0002
GLY 44PRO 45 0.0034
PRO 45PRO 46 -0.0001
PRO 46HIS 47 0.0194
HIS 47TRP 48 0.0002
TRP 48GLY 49 -0.0370
GLY 49LEU 50 0.0001
LEU 50GLU 51 -0.0220
GLU 51TYR 52 -0.0003
TYR 52GLN 53 0.0077
GLN 53ALA 54 -0.0002
ALA 54PRO 55 -0.0009
PRO 55TYR 56 -0.0003
TYR 56SER 57 0.0350
SER 57SER 58 -0.0001
SER 58PRO 59 0.0080
PRO 59PRO 60 -0.0000
PRO 60GLY 61 -0.1232
GLY 61PRO 62 0.0001
PRO 62PRO 63 0.0139
PRO 63CYS 64 -0.0001
CYS 64CYS 65 0.0928
CYS 65SER 66 0.0002
SER 66GLY 67 -0.0945
GLY 67SER 68 -0.0000
SER 68SER 69 0.0490
SER 69GLY 70 0.0003
GLY 70SER 71 -0.0155
SER 71SER 72 -0.0001
SER 72ALA 73 -0.0758
ALA 73GLY 74 0.0001
GLY 74CYS 75 0.0917
CYS 75SER 76 0.0000
SER 76ARG 77 -0.0031
ARG 77ASP 78 0.0001
ASP 78CYS 79 0.0310
CYS 79ASP 80 0.0003
ASP 80GLU 81 -0.0179
GLU 81PRO 82 0.0002
PRO 82LEU 83 0.0385
LEU 83THR 84 0.0002
THR 84SER 85 -0.0299
SER 85LEU 86 -0.0000
LEU 86THR 87 -0.0377
THR 87PRO 88 -0.0001
PRO 88ARG 89 -0.0383
ARG 89CYS 90 0.0003
CYS 90ASN 91 -0.0896
ASN 91THR 92 -0.0001
THR 92ALA 93 -0.0512
ALA 93TRP 94 0.0004
TRP 94ASN 95 0.0279
ASN 95ARG 96 0.0000
ARG 96LEU 97 -0.0164
LEU 97LYS 98 0.0004
LYS 98LEU 99 0.0552
LEU 99ASP 100 -0.0000
ASP 100GLN 101 -0.0089
GLN 101VAL 102 0.0002
VAL 102THR 103 0.0191
THR 103HIS 104 0.0003
HIS 104LYS 105 -0.0210
LYS 105SER 106 -0.0002
SER 106SER 107 -0.0048
SER 107GLU 108 -0.0002
GLU 108GLY 109 -0.0074
GLY 109PHE 110 -0.0003
PHE 110TYR 111 0.0315
TYR 111VAL 112 -0.0001
VAL 112CYS 113 0.0243
CYS 113PRO 114 -0.0003
PRO 114GLY 115 0.0120
GLY 115SER 116 0.0000
SER 116HIS 117 -0.0188
HIS 117ARG 118 0.0002
ARG 118PRO 119 -0.0339
PRO 119ARG 120 -0.0001
ARG 120GLU 121 0.0030
GLU 121ALA 122 -0.0004
ALA 122LYS 123 0.0205
LYS 123SER 124 0.0001
SER 124CYS 125 -0.0093
CYS 125GLY 126 0.0002
GLY 126GLY 127 0.0150
GLY 127PRO 128 0.0002
PRO 128ASP 129 0.0044
ASP 129SER 130 0.0001
SER 130PHE 131 -0.0175
PHE 131TYR 132 0.0001
TYR 132CYS 133 0.0234
CYS 133ALA 134 0.0002
ALA 134SER 135 0.0209
SER 135TRP 136 -0.0003
TRP 136GLY 137 -0.0174
GLY 137CYS 138 -0.0001
CYS 138GLU 139 0.0216
GLU 139THR 140 0.0001
THR 140THR 141 0.0530
THR 141GLY 142 0.0000
GLY 142ARG 143 0.0468
ARG 143VAL 144 -0.0001
VAL 144TYR 145 -0.0175
TYR 145TRP 146 -0.0000
TRP 146LYS 147 -0.0036
LYS 147PRO 148 0.0001
PRO 148SER 149 -0.0043
SER 149SER 150 -0.0003
SER 150SER 151 -0.0130
SER 151TRP 152 -0.0002
TRP 152ASP 153 0.0178
ASP 153TYR 154 0.0000
TYR 154ILE 155 0.0530
ILE 155THR 156 -0.0001
THR 156VAL 157 0.0712
VAL 157ASP 158 -0.0001
ASP 158ASN 159 0.0921
ASN 159ASN 160 -0.0005
ASN 160LEU 161 0.1151
LEU 161THR 162 0.0002
THR 162THR 163 0.0130
THR 163SER 164 -0.0001
SER 164GLN 165 -0.0110
GLN 165ALA 166 0.0002
ALA 166VAL 167 0.0313
VAL 167GLN 168 0.0003
GLN 168VAL 169 -0.0119
VAL 169CYS 170 -0.0001
CYS 170LYS 171 0.0027
LYS 171ASP 172 -0.0002
ASP 172ASN 173 -0.0454
ASN 173LYS 174 -0.0003
LYS 174TRP 175 0.0944
TRP 175CYS 176 -0.0000
CYS 176ASN 177 0.0484
ASN 177PRO 178 -0.0002
PRO 178LEU 179 0.1018
LEU 179ALA 180 0.0003
ALA 180ILE 181 0.0982
ILE 181GLN 182 -0.0002
GLN 182PHE 183 0.0585
PHE 183THR 184 -0.0003
THR 184ASN 185 0.0290
ASN 185ALA 186 0.0003
ALA 186GLY 187 -0.0027
GLY 187LYS 188 -0.0000
LYS 188GLN 189 0.0203
GLN 189VAL 190 0.0005
VAL 190THR 191 0.0029
THR 191SER 192 0.0000
SER 192TRP 193 0.0073
TRP 193THR 194 -0.0001
THR 194THR 195 0.0086
THR 195GLY 196 0.0002
GLY 196HIS 197 0.0169
HIS 197TYR 198 -0.0004
TYR 198TRP 199 0.0157
TRP 199GLY 200 0.0001
GLY 200LEU 201 0.0010
LEU 201ARG 202 -0.0000
ARG 202LEU 203 -0.0118
LEU 203TYR 204 0.0001
TYR 204VAL 205 -0.0153
VAL 205SER 206 0.0001
SER 206GLY 207 -0.0412
GLY 207ARG 208 0.0004
ARG 208ASP 209 0.0193
ASP 209PRO 210 0.0002
PRO 210GLY 211 0.0420
GLY 211LEU 212 0.0001
LEU 212THR 213 -0.0445
THR 213PHE 214 -0.0001
PHE 214GLY 215 -0.0026
GLY 215ILE 216 -0.0004
ILE 216ARG 217 0.0167
ARG 217LEU 218 0.0000
LEU 218ARG 219 0.0190
ARG 219TYR 220 -0.0002
TYR 220GLN 221 0.0831
GLN 221ASN 222 0.0001
ASN 222LEU 223 0.0383
LEU 223GLY 224 0.0002
GLY 224PRO 225 0.1974
PRO 225ARG 226 -0.0001
ARG 226VAL 227 -0.0569
VAL 227PRO 228 0.0001

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.