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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 -0.0002
ALA 2PRO 3 -0.2860
PRO 3TYR 4 0.0001
TYR 4GLU 5 -0.1124
GLU 5ASN 6 0.0002
ASN 6LEU 7 -0.1736
LEU 7MET 8 0.0001
MET 8VAL 9 0.0498
VAL 9PRO 10 0.0001
PRO 10SER 11 -0.0567
SER 11PRO 12 0.0001
PRO 12SER 13 0.1713
SER 13MET 14 -0.0001
MET 14GLY 15 0.1797
GLY 15ARG 16 -0.0001
ARG 16ASP 17 -0.1381
ASP 17ILE 18 0.0002
ILE 18PRO 19 -0.2627
PRO 19VAL 20 0.0003
VAL 20ALA 21 -0.2533
ALA 21PHE 22 0.0000
PHE 22LEU 23 -0.2227
LEU 23ALA 24 0.0001
ALA 24GLY 25 -0.3040
GLY 25GLY 26 0.0004
GLY 26PRO 27 0.1164
PRO 27HIS 28 -0.0002
HIS 28ALA 29 0.0321
ALA 29VAL 30 -0.0004
VAL 30TYR 31 -0.1356
TYR 31LEU 32 0.0001
LEU 32LEU 33 -0.0313
LEU 33ASP 34 -0.0003
ASP 34ALA 35 0.1262
ALA 35PHE 36 0.0000
PHE 36ASN 37 0.0056
ASN 37ALA 38 -0.0001
ALA 38GLY 39 0.0633
GLY 39PRO 40 -0.0002
PRO 40ASP 41 0.0015
ASP 41VAL 42 -0.0002
VAL 42SER 43 0.0620
SER 43ASN 44 -0.0001
ASN 44TRP 45 -0.0543
TRP 45VAL 46 -0.0001
VAL 46THR 47 0.0908
THR 47ALA 48 0.0003
ALA 48GLY 49 0.0220
GLY 49ASN 50 0.0002
ASN 50ALA 51 0.1279
ALA 51MET 52 -0.0002
MET 52ASN 53 -0.0280
ASN 53THR 54 -0.0003
THR 54LEU 55 0.0771
LEU 55ALA 56 -0.0001
ALA 56GLY 57 0.0924
GLY 57LYS 58 0.0001
LYS 58GLY 59 0.0506
GLY 59ILE 60 -0.0002
ILE 60SER 61 -0.2947
SER 61VAL 62 0.0002
VAL 62VAL 63 -0.1464
VAL 63ALA 64 0.0000
ALA 64PRO 65 -0.1720
PRO 65ALA 66 0.0002
ALA 66GLY 67 -0.0799
GLY 67GLY 68 0.0000
GLY 68ALA 69 0.2294
ALA 69TYR 70 0.0005
TYR 70SER 71 0.1046
SER 71MET 72 -0.0000
MET 72TYR 73 -0.0392
TYR 73THR 74 0.0004
THR 74ASN 75 -0.0518
ASN 75TRP 76 0.0003
TRP 76GLU 77 -0.2034
GLU 77GLN 78 0.0003
GLN 78ASP 79 -0.0160
ASP 79GLY 80 -0.0001
GLY 80SER 81 0.0393
SER 81LYS 82 -0.0002
LYS 82GLN 83 -0.0693
GLN 83TRP 84 0.0001
TRP 84ASP 85 0.0547
ASP 85THR 86 0.0000
THR 86PHE 87 0.1025
PHE 87LEU 88 0.0000
LEU 88SER 89 0.1102
SER 89ALA 90 -0.0005
ALA 90GLU 91 0.2727
GLU 91LEU 92 0.0005
LEU 92PRO 93 -0.1176
PRO 93ASP 94 -0.0000
ASP 94TRP 95 0.2078
TRP 95LEU 96 0.0003
LEU 96ALA 97 0.0712
ALA 97ALA 98 -0.0001
ALA 98ASN 99 0.0784
ASN 99ARG 100 0.0001
ARG 100GLY 101 0.0990
GLY 101LEU 102 -0.0001
LEU 102ALA 103 0.1271
ALA 103PRO 104 0.0001
PRO 104GLY 105 0.0467
GLY 105GLY 106 0.0004
GLY 106HIS 107 0.0396
HIS 107ALA 108 0.0003
ALA 108ALA 109 -0.0086
ALA 109VAL 110 -0.0003
VAL 110GLY 111 0.0638
GLY 111ALA 112 0.0000
ALA 112ALA 113 0.0475
ALA 113GLN 114 -0.0002
GLN 114GLY 115 -0.0563
GLY 115GLY 116 0.0000
GLY 116TYR 117 -0.0184
TYR 117GLY 118 0.0003
GLY 118ALA 119 -0.1455
ALA 119MET 120 0.0002
MET 120ALA 121 0.1580
ALA 121LEU 122 0.0001
LEU 122ALA 123 0.0443
ALA 123ALA 124 0.0004
ALA 124PHE 125 0.2635
PHE 125HIS 126 -0.0002
HIS 126PRO 127 0.0891
PRO 127ASP 128 -0.0002
ASP 128ARG 129 0.1044
ARG 129PHE 130 0.0001
PHE 130GLY 131 -0.0281
GLY 131PHE 132 -0.0001
PHE 132ALA 133 -0.0162
ALA 133GLY 134 0.0002
GLY 134SER 135 0.0346
SER 135MET 136 0.0001
MET 136SER 137 0.0425
SER 137GLY 138 -0.0003
GLY 138PHE 139 -0.0593
PHE 139LEU 140 -0.0002
LEU 140TYR 141 -0.0522
TYR 141PRO 142 -0.0001
PRO 142SER 143 -0.2141
SER 143ASN 144 0.0000
ASN 144THR 145 -0.0434
THR 145THR 146 -0.0001
THR 146THR 147 0.0358
THR 147ASN 148 0.0001
ASN 148GLY 149 -0.0325
GLY 149ALA 150 -0.0002
ALA 150ILE 151 0.0917
ILE 151ALA 152 0.0001
ALA 152ALA 153 -0.1536
ALA 153GLY 154 0.0001
GLY 154MET 155 0.1330
MET 155GLN 156 -0.0002
GLN 156GLN 157 -0.0765
GLN 157PHE 158 0.0003
PHE 158GLY 159 -0.0798
GLY 159GLY 160 -0.0001
GLY 160VAL 161 -0.0608
VAL 161ASP 162 -0.0003
ASP 162THR 163 0.2989
THR 163ASN 164 0.0002
ASN 164GLY 165 -0.1356
GLY 165MET 166 0.0001
MET 166TRP 167 -0.0992
TRP 167GLY 168 -0.0000
GLY 168ALA 169 0.0313
ALA 169PRO 170 -0.0004
PRO 170GLN 171 -0.0590
GLN 171LEU 172 0.0004
LEU 172GLY 173 0.4889
GLY 173ARG 174 0.0001
ARG 174TRP 175 -0.0700
TRP 175LYS 176 -0.0001
LYS 176TRP 177 -0.2724
TRP 177HIS 178 0.0003
HIS 178ASP 179 0.2123
ASP 179PRO 180 -0.0000
PRO 180TRP 181 0.0819
TRP 181VAL 182 -0.0002
VAL 182HIS 183 -0.0211
HIS 183ALA 184 -0.0000
ALA 184SER 185 -0.1893
SER 185LEU 186 0.0003
LEU 186LEU 187 -0.0670
LEU 187ALA 188 0.0002
ALA 188GLN 189 -0.0624
GLN 189ASN 190 0.0002
ASN 190ASN 191 0.0330
ASN 191THR 192 -0.0003
THR 192ARG 193 0.0157
ARG 193VAL 194 -0.0003
VAL 194TRP 195 -0.0562
TRP 195VAL 196 0.0000
VAL 196TRP 197 -0.0466
TRP 197SER 198 -0.0002
SER 198PRO 199 0.0199
PRO 199THR 200 -0.0002
THR 200ASN 201 -0.1003
ASN 201PRO 202 -0.0003
PRO 202GLY 203 -0.0150
GLY 203ALA 204 -0.0003
ALA 204SER 205 -0.0639
SER 205ASP 206 -0.0001
ASP 206PRO 207 -0.0370
PRO 207ALA 208 -0.0002
ALA 208ALA 209 -0.0593
ALA 209MET 210 0.0001
MET 210ILE 211 -0.0191
ILE 211GLY 212 0.0001
GLY 212GLN 213 -0.1276
GLN 213ALA 214 -0.0003
ALA 214ALA 215 0.0204
ALA 215GLU 216 -0.0001
GLU 216ALA 217 0.0032
ALA 217MET 218 -0.0000
MET 218GLY 219 0.0012
GLY 219ASN 220 0.0001
ASN 220SER 221 0.1529
SER 221ARG 222 -0.0000
ARG 222MET 223 0.1171
MET 223PHE 224 -0.0002
PHE 224TYR 225 0.3213
TYR 225ASN 226 0.0001
ASN 226GLN 227 0.0831
GLN 227TYR 228 0.0000
TYR 228ARG 229 0.2265
ARG 229SER 230 0.0000
SER 230VAL 231 0.0086
VAL 231GLY 232 0.0003
GLY 232GLY 233 -0.0534
GLY 233HIS 234 0.0001
HIS 234ASN 235 -0.1358
ASN 235GLY 236 -0.0002
GLY 236HIS 237 -0.0435
HIS 237PHE 238 0.0002
PHE 238ASP 239 -0.1303
ASP 239PHE 240 0.0003
PHE 240PRO 241 0.0835
PRO 241ALA 242 0.0001
ALA 242SER 243 -0.1207
SER 243GLY 244 -0.0001
GLY 244ASP 245 -0.2364
ASP 245ASN 246 -0.0003
ASN 246GLY 247 0.0678
GLY 247TRP 248 -0.0002
TRP 248GLY 249 -0.1659
GLY 249SER 250 0.0003
SER 250TRP 251 -0.0227
TRP 251ALA 252 0.0002
ALA 252PRO 253 -0.1445
PRO 253GLN 254 -0.0001
GLN 254LEU 255 -0.1430
LEU 255GLY 256 -0.0001
GLY 256ALA 257 -0.3969
ALA 257MET 258 -0.0001
MET 258SER 259 -0.2333
SER 259GLY 260 0.0001
GLY 260ASP 261 -0.3017
ASP 261ILE 262 -0.0000
ILE 262VAL 263 -0.0370
VAL 263GLY 264 -0.0005
GLY 264ALA 265 -0.1216
ALA 265ILE 266 -0.0002
ILE 266ARG 267 -0.1262

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.