CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 0.0000
ALA 2PRO 3 -0.1528
PRO 3TYR 4 -0.0000
TYR 4GLU 5 0.2308
GLU 5ASN 6 0.0001
ASN 6LEU 7 -0.1010
LEU 7MET 8 -0.0003
MET 8VAL 9 -0.1083
VAL 9PRO 10 0.0001
PRO 10SER 11 0.1028
SER 11PRO 12 0.0002
PRO 12SER 13 0.1224
SER 13MET 14 -0.0001
MET 14GLY 15 0.0956
GLY 15ARG 16 0.0004
ARG 16ASP 17 0.1825
ASP 17ILE 18 -0.0004
ILE 18PRO 19 0.0395
PRO 19VAL 20 0.0002
VAL 20ALA 21 -0.0494
ALA 21PHE 22 -0.0001
PHE 22LEU 23 0.0020
LEU 23ALA 24 0.0000
ALA 24GLY 25 -0.2323
GLY 25GLY 26 -0.0001
GLY 26PRO 27 0.0523
PRO 27HIS 28 -0.0001
HIS 28ALA 29 0.0122
ALA 29VAL 30 -0.0000
VAL 30TYR 31 -0.0438
TYR 31LEU 32 0.0001
LEU 32LEU 33 -0.3432
LEU 33ASP 34 0.0002
ASP 34ALA 35 -0.2250
ALA 35PHE 36 -0.0000
PHE 36ASN 37 0.0516
ASN 37ALA 38 -0.0001
ALA 38GLY 39 0.0398
GLY 39PRO 40 -0.0001
PRO 40ASP 41 0.0013
ASP 41VAL 42 -0.0002
VAL 42SER 43 0.0967
SER 43ASN 44 0.0001
ASN 44TRP 45 -0.0559
TRP 45VAL 46 0.0001
VAL 46THR 47 -0.0212
THR 47ALA 48 -0.0000
ALA 48GLY 49 0.0276
GLY 49ASN 50 -0.0000
ASN 50ALA 51 0.2337
ALA 51MET 52 0.0001
MET 52ASN 53 0.2521
ASN 53THR 54 0.0002
THR 54LEU 55 -0.0381
LEU 55ALA 56 -0.0002
ALA 56GLY 57 0.1044
GLY 57LYS 58 0.0001
LYS 58GLY 59 0.0098
GLY 59ILE 60 -0.0000
ILE 60SER 61 -0.1054
SER 61VAL 62 0.0002
VAL 62VAL 63 0.0510
VAL 63ALA 64 -0.0000
ALA 64PRO 65 -0.1036
PRO 65ALA 66 -0.0001
ALA 66GLY 67 -0.1132
GLY 67GLY 68 -0.0002
GLY 68ALA 69 -0.2625
ALA 69TYR 70 -0.0003
TYR 70SER 71 -0.0302
SER 71MET 72 0.0000
MET 72TYR 73 -0.1605
TYR 73THR 74 0.0001
THR 74ASN 75 0.1057
ASN 75TRP 76 -0.0003
TRP 76GLU 77 -0.0890
GLU 77GLN 78 0.0001
GLN 78ASP 79 0.1989
ASP 79GLY 80 0.0001
GLY 80SER 81 0.1377
SER 81LYS 82 -0.0000
LYS 82GLN 83 -0.1606
GLN 83TRP 84 0.0004
TRP 84ASP 85 -0.0526
ASP 85THR 86 0.0000
THR 86PHE 87 -0.0071
PHE 87LEU 88 -0.0001
LEU 88SER 89 0.0370
SER 89ALA 90 -0.0002
ALA 90GLU 91 -0.0617
GLU 91LEU 92 -0.0004
LEU 92PRO 93 -0.0357
PRO 93ASP 94 -0.0006
ASP 94TRP 95 -0.1063
TRP 95LEU 96 0.0000
LEU 96ALA 97 0.0270
ALA 97ALA 98 0.0002
ALA 98ASN 99 0.0663
ASN 99ARG 100 0.0001
ARG 100GLY 101 -0.0565
GLY 101LEU 102 0.0000
LEU 102ALA 103 0.0034
ALA 103PRO 104 -0.0001
PRO 104GLY 105 -0.0917
GLY 105GLY 106 -0.0003
GLY 106HIS 107 0.1027
HIS 107ALA 108 -0.0005
ALA 108ALA 109 -0.1857
ALA 109VAL 110 0.0003
VAL 110GLY 111 -0.1223
GLY 111ALA 112 -0.0000
ALA 112ALA 113 -0.2103
ALA 113GLN 114 0.0003
GLN 114GLY 115 -0.1948
GLY 115GLY 116 -0.0002
GLY 116TYR 117 -0.1770
TYR 117GLY 118 -0.0003
GLY 118ALA 119 -0.2582
ALA 119MET 120 -0.0000
MET 120ALA 121 -0.0512
ALA 121LEU 122 -0.0001
LEU 122ALA 123 -0.0919
ALA 123ALA 124 -0.0002
ALA 124PHE 125 -0.1020
PHE 125HIS 126 -0.0001
HIS 126PRO 127 -0.1791
PRO 127ASP 128 -0.0002
ASP 128ARG 129 -0.0183
ARG 129PHE 130 -0.0003
PHE 130GLY 131 -0.0961
GLY 131PHE 132 0.0002
PHE 132ALA 133 -0.1712
ALA 133GLY 134 -0.0003
GLY 134SER 135 -0.0969
SER 135MET 136 0.0001
MET 136SER 137 -0.1521
SER 137GLY 138 0.0003
GLY 138PHE 139 -0.2653
PHE 139LEU 140 -0.0005
LEU 140TYR 141 -0.2626
TYR 141PRO 142 0.0004
PRO 142SER 143 -0.1263
SER 143ASN 144 0.0001
ASN 144THR 145 0.0450
THR 145THR 146 -0.0002
THR 146THR 147 -0.0703
THR 147ASN 148 -0.0001
ASN 148GLY 149 0.0074
GLY 149ALA 150 0.0002
ALA 150ILE 151 -0.0745
ILE 151ALA 152 0.0002
ALA 152ALA 153 0.0028
ALA 153GLY 154 -0.0003
GLY 154MET 155 0.0154
MET 155GLN 156 -0.0001
GLN 156GLN 157 0.0461
GLN 157PHE 158 0.0001
PHE 158GLY 159 0.0788
GLY 159GLY 160 0.0001
GLY 160VAL 161 0.0522
VAL 161ASP 162 0.0000
ASP 162THR 163 -0.0198
THR 163ASN 164 -0.0001
ASN 164GLY 165 0.0652
GLY 165MET 166 0.0001
MET 166TRP 167 0.0990
TRP 167GLY 168 -0.0002
GLY 168ALA 169 -0.0661
ALA 169PRO 170 -0.0003
PRO 170GLN 171 -0.0239
GLN 171LEU 172 0.0001
LEU 172GLY 173 -0.5801
GLY 173ARG 174 0.0002
ARG 174TRP 175 -0.0054
TRP 175LYS 176 0.0000
LYS 176TRP 177 0.1421
TRP 177HIS 178 0.0003
HIS 178ASP 179 0.0480
ASP 179PRO 180 0.0000
PRO 180TRP 181 -0.0052
TRP 181VAL 182 0.0003
VAL 182HIS 183 -0.0648
HIS 183ALA 184 -0.0000
ALA 184SER 185 0.1561
SER 185LEU 186 -0.0001
LEU 186LEU 187 -0.0383
LEU 187ALA 188 -0.0002
ALA 188GLN 189 0.0442
GLN 189ASN 190 0.0002
ASN 190ASN 191 0.0375
ASN 191THR 192 -0.0001
THR 192ARG 193 0.0344
ARG 193VAL 194 0.0003
VAL 194TRP 195 0.0796
TRP 195VAL 196 -0.0001
VAL 196TRP 197 0.0794
TRP 197SER 198 0.0002
SER 198PRO 199 0.0330
PRO 199THR 200 -0.0003
THR 200ASN 201 0.1864
ASN 201PRO 202 0.0003
PRO 202GLY 203 0.1762
GLY 203ALA 204 -0.0003
ALA 204SER 205 -0.0690
SER 205ASP 206 0.0001
ASP 206PRO 207 -0.1023
PRO 207ALA 208 0.0001
ALA 208ALA 209 -0.0252
ALA 209MET 210 -0.0000
MET 210ILE 211 0.0173
ILE 211GLY 212 -0.0002
GLY 212GLN 213 0.2474
GLN 213ALA 214 -0.0002
ALA 214ALA 215 -0.0585
ALA 215GLU 216 -0.0001
GLU 216ALA 217 -0.1611
ALA 217MET 218 0.0002
MET 218GLY 219 -0.1412
GLY 219ASN 220 -0.0000
ASN 220SER 221 -0.1131
SER 221ARG 222 -0.0002
ARG 222MET 223 -0.3167
MET 223PHE 224 -0.0003
PHE 224TYR 225 0.0438
TYR 225ASN 226 0.0002
ASN 226GLN 227 -0.2302
GLN 227TYR 228 -0.0004
TYR 228ARG 229 -0.0751
ARG 229SER 230 0.0003
SER 230VAL 231 -0.1531
VAL 231GLY 232 -0.0001
GLY 232GLY 233 -0.1089
GLY 233HIS 234 -0.0000
HIS 234ASN 235 -0.2226
ASN 235GLY 236 -0.0001
GLY 236HIS 237 0.3350
HIS 237PHE 238 -0.0002
PHE 238ASP 239 0.2235
ASP 239PHE 240 0.0002
PHE 240PRO 241 -0.1320
PRO 241ALA 242 0.0000
ALA 242SER 243 0.1561
SER 243GLY 244 0.0001
GLY 244ASP 245 0.3617
ASP 245ASN 246 -0.0001
ASN 246GLY 247 -0.0265
GLY 247TRP 248 0.0003
TRP 248GLY 249 0.2244
GLY 249SER 250 0.0004
SER 250TRP 251 0.0684
TRP 251ALA 252 -0.0001
ALA 252PRO 253 -0.0309
PRO 253GLN 254 -0.0003
GLN 254LEU 255 0.0488
LEU 255GLY 256 0.0001
GLY 256ALA 257 -0.0820
ALA 257MET 258 0.0000
MET 258SER 259 -0.1782
SER 259GLY 260 0.0001
GLY 260ASP 261 -0.3186
ASP 261ILE 262 -0.0001
ILE 262VAL 263 -0.2013
VAL 263GLY 264 -0.0003
GLY 264ALA 265 -0.2007
ALA 265ILE 266 -0.0004
ILE 266ARG 267 -0.2928

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.