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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 0.0001
ALA 2PRO 3 0.0608
PRO 3TYR 4 0.0002
TYR 4GLU 5 0.0213
GLU 5ASN 6 0.0000
ASN 6LEU 7 0.3047
LEU 7MET 8 0.0000
MET 8VAL 9 0.1152
VAL 9PRO 10 0.0002
PRO 10SER 11 -0.0692
SER 11PRO 12 -0.0001
PRO 12SER 13 0.0132
SER 13MET 14 -0.0003
MET 14GLY 15 -0.2968
GLY 15ARG 16 0.0003
ARG 16ASP 17 0.0873
ASP 17ILE 18 0.0004
ILE 18PRO 19 0.3747
PRO 19VAL 20 0.0001
VAL 20ALA 21 0.5373
ALA 21PHE 22 0.0002
PHE 22LEU 23 0.1756
LEU 23ALA 24 -0.0002
ALA 24GLY 25 0.0895
GLY 25GLY 26 0.0000
GLY 26PRO 27 -0.0526
PRO 27HIS 28 0.0003
HIS 28ALA 29 0.0389
ALA 29VAL 30 0.0000
VAL 30TYR 31 0.2273
TYR 31LEU 32 0.0001
LEU 32LEU 33 0.0182
LEU 33ASP 34 -0.0002
ASP 34ALA 35 -0.3121
ALA 35PHE 36 -0.0004
PHE 36ASN 37 -0.1120
ASN 37ALA 38 -0.0002
ALA 38GLY 39 -0.2334
GLY 39PRO 40 -0.0000
PRO 40ASP 41 -0.0947
ASP 41VAL 42 -0.0002
VAL 42SER 43 -0.1780
SER 43ASN 44 0.0001
ASN 44TRP 45 0.1962
TRP 45VAL 46 -0.0002
VAL 46THR 47 -0.1756
THR 47ALA 48 0.0001
ALA 48GLY 49 0.0453
GLY 49ASN 50 -0.0003
ASN 50ALA 51 -0.1174
ALA 51MET 52 0.0001
MET 52ASN 53 0.1699
ASN 53THR 54 0.0001
THR 54LEU 55 0.0079
LEU 55ALA 56 -0.0001
ALA 56GLY 57 -0.0123
GLY 57LYS 58 -0.0000
LYS 58GLY 59 -0.0161
GLY 59ILE 60 -0.0001
ILE 60SER 61 0.0504
SER 61VAL 62 0.0001
VAL 62VAL 63 0.3258
VAL 63ALA 64 0.0001
ALA 64PRO 65 0.3273
PRO 65ALA 66 0.0002
ALA 66GLY 67 0.0570
GLY 67GLY 68 -0.0001
GLY 68ALA 69 -0.3549
ALA 69TYR 70 -0.0002
TYR 70SER 71 0.0198
SER 71MET 72 -0.0001
MET 72TYR 73 -0.1487
TYR 73THR 74 0.0002
THR 74ASN 75 0.1954
ASN 75TRP 76 -0.0002
TRP 76GLU 77 0.0202
GLU 77GLN 78 0.0001
GLN 78ASP 79 -0.1925
ASP 79GLY 80 0.0000
GLY 80SER 81 -0.0748
SER 81LYS 82 0.0001
LYS 82GLN 83 0.0141
GLN 83TRP 84 0.0001
TRP 84ASP 85 0.1088
ASP 85THR 86 0.0002
THR 86PHE 87 0.0207
PHE 87LEU 88 0.0004
LEU 88SER 89 0.0086
SER 89ALA 90 0.0000
ALA 90GLU 91 -0.2800
GLU 91LEU 92 0.0002
LEU 92PRO 93 -0.0414
PRO 93ASP 94 0.0001
ASP 94TRP 95 -0.0730
TRP 95LEU 96 -0.0002
LEU 96ALA 97 -0.0375
ALA 97ALA 98 0.0000
ALA 98ASN 99 -0.0756
ASN 99ARG 100 0.0002
ARG 100GLY 101 -0.0082
GLY 101LEU 102 0.0001
LEU 102ALA 103 0.0406
ALA 103PRO 104 0.0002
PRO 104GLY 105 -0.0466
GLY 105GLY 106 0.0003
GLY 106HIS 107 0.0842
HIS 107ALA 108 -0.0003
ALA 108ALA 109 0.0782
ALA 109VAL 110 -0.0000
VAL 110GLY 111 0.0495
GLY 111ALA 112 -0.0001
ALA 112ALA 113 -0.1048
ALA 113GLN 114 0.0000
GLN 114GLY 115 -0.0229
GLY 115GLY 116 -0.0005
GLY 116TYR 117 0.1214
TYR 117GLY 118 0.0001
GLY 118ALA 119 0.0443
ALA 119MET 120 -0.0001
MET 120ALA 121 0.0437
ALA 121LEU 122 0.0001
LEU 122ALA 123 -0.0250
ALA 123ALA 124 0.0000
ALA 124PHE 125 -0.1147
PHE 125HIS 126 0.0002
HIS 126PRO 127 -0.1329
PRO 127ASP 128 0.0002
ASP 128ARG 129 -0.0616
ARG 129PHE 130 -0.0001
PHE 130GLY 131 -0.2178
GLY 131PHE 132 -0.0004
PHE 132ALA 133 0.0505
ALA 133GLY 134 0.0001
GLY 134SER 135 -0.1109
SER 135MET 136 0.0002
MET 136SER 137 -0.0962
SER 137GLY 138 0.0002
GLY 138PHE 139 0.1522
PHE 139LEU 140 -0.0002
LEU 140TYR 141 -0.1189
TYR 141PRO 142 -0.0004
PRO 142SER 143 -0.0012
SER 143ASN 144 -0.0002
ASN 144THR 145 0.0721
THR 145THR 146 0.0003
THR 146THR 147 -0.1918
THR 147ASN 148 0.0002
ASN 148GLY 149 0.0788
GLY 149ALA 150 -0.0002
ALA 150ILE 151 -0.1185
ILE 151ALA 152 0.0004
ALA 152ALA 153 0.0852
ALA 153GLY 154 0.0003
GLY 154MET 155 0.0258
MET 155GLN 156 0.0002
GLN 156GLN 157 0.0444
GLN 157PHE 158 -0.0002
PHE 158GLY 159 0.0609
GLY 159GLY 160 0.0001
GLY 160VAL 161 0.1130
VAL 161ASP 162 0.0001
ASP 162THR 163 0.1667
THR 163ASN 164 0.0001
ASN 164GLY 165 -0.1613
GLY 165MET 166 -0.0001
MET 166TRP 167 -0.1008
TRP 167GLY 168 -0.0002
GLY 168ALA 169 -0.3731
ALA 169PRO 170 -0.0001
PRO 170GLN 171 0.1639
GLN 171LEU 172 -0.0001
LEU 172GLY 173 0.2012
GLY 173ARG 174 0.0002
ARG 174TRP 175 0.1376
TRP 175LYS 176 -0.0000
LYS 176TRP 177 0.0633
TRP 177HIS 178 -0.0002
HIS 178ASP 179 0.0095
ASP 179PRO 180 0.0001
PRO 180TRP 181 -0.2935
TRP 181VAL 182 0.0003
VAL 182HIS 183 0.0346
HIS 183ALA 184 -0.0001
ALA 184SER 185 0.0905
SER 185LEU 186 -0.0001
LEU 186LEU 187 0.1106
LEU 187ALA 188 -0.0001
ALA 188GLN 189 -0.0872
GLN 189ASN 190 0.0002
ASN 190ASN 191 -0.0096
ASN 191THR 192 -0.0004
THR 192ARG 193 0.1417
ARG 193VAL 194 0.0003
VAL 194TRP 195 0.0463
TRP 195VAL 196 -0.0002
VAL 196TRP 197 -0.0305
TRP 197SER 198 -0.0002
SER 198PRO 199 -0.0480
PRO 199THR 200 0.0002
THR 200ASN 201 -0.0587
ASN 201PRO 202 0.0002
PRO 202GLY 203 0.0274
GLY 203ALA 204 -0.0000
ALA 204SER 205 0.0164
SER 205ASP 206 -0.0000
ASP 206PRO 207 0.0533
PRO 207ALA 208 -0.0001
ALA 208ALA 209 0.0647
ALA 209MET 210 -0.0004
MET 210ILE 211 0.2302
ILE 211GLY 212 -0.0001
GLY 212GLN 213 0.0989
GLN 213ALA 214 0.0000
ALA 214ALA 215 -0.0671
ALA 215GLU 216 0.0001
GLU 216ALA 217 -0.1690
ALA 217MET 218 0.0002
MET 218GLY 219 0.0044
GLY 219ASN 220 0.0005
ASN 220SER 221 0.1821
SER 221ARG 222 0.0001
ARG 222MET 223 0.1396
MET 223PHE 224 -0.0002
PHE 224TYR 225 0.1893
TYR 225ASN 226 0.0002
ASN 226GLN 227 -0.1109
GLN 227TYR 228 -0.0000
TYR 228ARG 229 -0.0122
ARG 229SER 230 0.0002
SER 230VAL 231 -0.2192
VAL 231GLY 232 0.0002
GLY 232GLY 233 -0.0803
GLY 233HIS 234 -0.0001
HIS 234ASN 235 -0.2592
ASN 235GLY 236 0.0003
GLY 236HIS 237 0.2147
HIS 237PHE 238 0.0004
PHE 238ASP 239 0.0533
ASP 239PHE 240 0.0002
PHE 240PRO 241 0.2272
PRO 241ALA 242 -0.0001
ALA 242SER 243 -0.1776
SER 243GLY 244 0.0002
GLY 244ASP 245 -0.0898
ASP 245ASN 246 0.0002
ASN 246GLY 247 -0.4456
GLY 247TRP 248 -0.0002
TRP 248GLY 249 -0.0515
GLY 249SER 250 0.0002
SER 250TRP 251 -0.1384
TRP 251ALA 252 -0.0000
ALA 252PRO 253 0.1266
PRO 253GLN 254 0.0000
GLN 254LEU 255 -0.4961
LEU 255GLY 256 -0.0004
GLY 256ALA 257 -0.1464
ALA 257MET 258 0.0001
MET 258SER 259 -0.3133
SER 259GLY 260 -0.0001
GLY 260ASP 261 -0.2403
ASP 261ILE 262 0.0002
ILE 262VAL 263 -0.0840
VAL 263GLY 264 0.0003
GLY 264ALA 265 -0.0883
ALA 265ILE 266 0.0002
ILE 266ARG 267 -0.0571

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.