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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 -0.0001
ALA 2PRO 3 0.0913
PRO 3TYR 4 -0.0000
TYR 4GLU 5 -0.0967
GLU 5ASN 6 0.0001
ASN 6LEU 7 0.4445
LEU 7MET 8 0.0002
MET 8VAL 9 0.1936
VAL 9PRO 10 -0.0001
PRO 10SER 11 0.2154
SER 11PRO 12 -0.0002
PRO 12SER 13 0.4122
SER 13MET 14 -0.0000
MET 14GLY 15 -0.1663
GLY 15ARG 16 -0.0002
ARG 16ASP 17 0.2404
ASP 17ILE 18 -0.0001
ILE 18PRO 19 0.2788
PRO 19VAL 20 -0.0002
VAL 20ALA 21 0.4034
ALA 21PHE 22 0.0000
PHE 22LEU 23 0.1489
LEU 23ALA 24 -0.0000
ALA 24GLY 25 0.3359
GLY 25GLY 26 -0.0003
GLY 26PRO 27 -0.1914
PRO 27HIS 28 -0.0003
HIS 28ALA 29 0.0708
ALA 29VAL 30 0.0004
VAL 30TYR 31 -0.0985
TYR 31LEU 32 -0.0004
LEU 32LEU 33 -0.3605
LEU 33ASP 34 -0.0001
ASP 34ALA 35 -0.0997
ALA 35PHE 36 -0.0003
PHE 36ASN 37 0.0101
ASN 37ALA 38 -0.0001
ALA 38GLY 39 0.0292
GLY 39PRO 40 0.0000
PRO 40ASP 41 0.0999
ASP 41VAL 42 -0.0001
VAL 42SER 43 0.0692
SER 43ASN 44 0.0000
ASN 44TRP 45 0.0732
TRP 45VAL 46 -0.0002
VAL 46THR 47 -0.0824
THR 47ALA 48 0.0001
ALA 48GLY 49 -0.0322
GLY 49ASN 50 0.0003
ASN 50ALA 51 -0.1742
ALA 51MET 52 -0.0002
MET 52ASN 53 -0.0713
ASN 53THR 54 -0.0001
THR 54LEU 55 -0.1323
LEU 55ALA 56 0.0003
ALA 56GLY 57 -0.0043
GLY 57LYS 58 -0.0004
LYS 58GLY 59 -0.1315
GLY 59ILE 60 -0.0003
ILE 60SER 61 0.2811
SER 61VAL 62 -0.0000
VAL 62VAL 63 0.0362
VAL 63ALA 64 -0.0001
ALA 64PRO 65 -0.0193
PRO 65ALA 66 0.0003
ALA 66GLY 67 -0.0591
GLY 67GLY 68 -0.0003
GLY 68ALA 69 0.2747
ALA 69TYR 70 -0.0001
TYR 70SER 71 0.2157
SER 71MET 72 -0.0002
MET 72TYR 73 -0.0350
TYR 73THR 74 -0.0000
THR 74ASN 75 -0.0898
ASN 75TRP 76 0.0001
TRP 76GLU 77 -0.0736
GLU 77GLN 78 -0.0001
GLN 78ASP 79 -0.1055
ASP 79GLY 80 0.0000
GLY 80SER 81 0.0372
SER 81LYS 82 -0.0003
LYS 82GLN 83 -0.0615
GLN 83TRP 84 0.0002
TRP 84ASP 85 0.0195
ASP 85THR 86 0.0002
THR 86PHE 87 0.0542
PHE 87LEU 88 -0.0000
LEU 88SER 89 0.0427
SER 89ALA 90 -0.0003
ALA 90GLU 91 -0.1020
GLU 91LEU 92 -0.0000
LEU 92PRO 93 -0.1582
PRO 93ASP 94 -0.0002
ASP 94TRP 95 0.0429
TRP 95LEU 96 0.0003
LEU 96ALA 97 -0.0772
ALA 97ALA 98 0.0002
ALA 98ASN 99 -0.1289
ASN 99ARG 100 0.0002
ARG 100GLY 101 0.1039
GLY 101LEU 102 -0.0002
LEU 102ALA 103 -0.0056
ALA 103PRO 104 0.0001
PRO 104GLY 105 0.0702
GLY 105GLY 106 -0.0001
GLY 106HIS 107 0.0957
HIS 107ALA 108 0.0000
ALA 108ALA 109 -0.2491
ALA 109VAL 110 -0.0005
VAL 110GLY 111 -0.2070
GLY 111ALA 112 -0.0002
ALA 112ALA 113 -0.1850
ALA 113GLN 114 0.0000
GLN 114GLY 115 -0.1359
GLY 115GLY 116 -0.0001
GLY 116TYR 117 -0.2141
TYR 117GLY 118 0.0001
GLY 118ALA 119 -0.2121
ALA 119MET 120 -0.0006
MET 120ALA 121 -0.0842
ALA 121LEU 122 0.0000
LEU 122ALA 123 0.1584
ALA 123ALA 124 -0.0000
ALA 124PHE 125 0.0972
PHE 125HIS 126 0.0000
HIS 126PRO 127 0.1503
PRO 127ASP 128 0.0002
ASP 128ARG 129 0.1170
ARG 129PHE 130 0.0002
PHE 130GLY 131 0.1980
GLY 131PHE 132 0.0002
PHE 132ALA 133 -0.2299
ALA 133GLY 134 -0.0001
GLY 134SER 135 -0.1899
SER 135MET 136 -0.0003
MET 136SER 137 -0.2503
SER 137GLY 138 0.0003
GLY 138PHE 139 -0.2683
PHE 139LEU 140 -0.0001
LEU 140TYR 141 -0.2077
TYR 141PRO 142 0.0000
PRO 142SER 143 -0.0598
SER 143ASN 144 0.0002
ASN 144THR 145 -0.1745
THR 145THR 146 -0.0002
THR 146THR 147 0.0207
THR 147ASN 148 0.0000
ASN 148GLY 149 -0.0457
GLY 149ALA 150 0.0003
ALA 150ILE 151 0.1026
ILE 151ALA 152 0.0002
ALA 152ALA 153 0.0455
ALA 153GLY 154 -0.0001
GLY 154MET 155 0.1241
MET 155GLN 156 -0.0003
GLN 156GLN 157 0.0113
GLN 157PHE 158 -0.0001
PHE 158GLY 159 -0.0415
GLY 159GLY 160 -0.0001
GLY 160VAL 161 0.1535
VAL 161ASP 162 -0.0001
ASP 162THR 163 -0.0628
THR 163ASN 164 0.0000
ASN 164GLY 165 0.2196
GLY 165MET 166 -0.0001
MET 166TRP 167 -0.0006
TRP 167GLY 168 0.0003
GLY 168ALA 169 -0.0023
ALA 169PRO 170 -0.0001
PRO 170GLN 171 -0.1466
GLN 171LEU 172 -0.0002
LEU 172GLY 173 -0.0945
GLY 173ARG 174 0.0001
ARG 174TRP 175 0.0486
TRP 175LYS 176 0.0000
LYS 176TRP 177 -0.0130
TRP 177HIS 178 -0.0003
HIS 178ASP 179 0.1248
ASP 179PRO 180 0.0003
PRO 180TRP 181 0.1139
TRP 181VAL 182 0.0001
VAL 182HIS 183 -0.1164
HIS 183ALA 184 -0.0002
ALA 184SER 185 -0.0284
SER 185LEU 186 -0.0002
LEU 186LEU 187 -0.1621
LEU 187ALA 188 0.0003
ALA 188GLN 189 0.0622
GLN 189ASN 190 0.0000
ASN 190ASN 191 0.0256
ASN 191THR 192 0.0001
THR 192ARG 193 -0.4355
ARG 193VAL 194 0.0002
VAL 194TRP 195 -0.1794
TRP 195VAL 196 0.0000
VAL 196TRP 197 -0.0446
TRP 197SER 198 0.0000
SER 198PRO 199 0.0462
PRO 199THR 200 0.0002
THR 200ASN 201 -0.0477
ASN 201PRO 202 0.0001
PRO 202GLY 203 0.0313
GLY 203ALA 204 -0.0000
ALA 204SER 205 0.1068
SER 205ASP 206 0.0006
ASP 206PRO 207 -0.1818
PRO 207ALA 208 -0.0003
ALA 208ALA 209 -0.1640
ALA 209MET 210 -0.0000
MET 210ILE 211 -0.3281
ILE 211GLY 212 -0.0002
GLY 212GLN 213 -0.0931
GLN 213ALA 214 -0.0001
ALA 214ALA 215 0.0909
ALA 215GLU 216 0.0001
GLU 216ALA 217 -0.0928
ALA 217MET 218 -0.0000
MET 218GLY 219 0.1310
GLY 219ASN 220 -0.0003
ASN 220SER 221 -0.3289
SER 221ARG 222 0.0002
ARG 222MET 223 0.1281
MET 223PHE 224 0.0002
PHE 224TYR 225 -0.0671
TYR 225ASN 226 -0.0004
ASN 226GLN 227 0.1063
GLN 227TYR 228 0.0004
TYR 228ARG 229 0.0646
ARG 229SER 230 0.0001
SER 230VAL 231 0.0843
VAL 231GLY 232 -0.0000
GLY 232GLY 233 -0.0440
GLY 233HIS 234 -0.0000
HIS 234ASN 235 0.0677
ASN 235GLY 236 0.0002
GLY 236HIS 237 -0.2619
HIS 237PHE 238 -0.0000
PHE 238ASP 239 -0.1196
ASP 239PHE 240 -0.0002
PHE 240PRO 241 0.0417
PRO 241ALA 242 -0.0001
ALA 242SER 243 0.0600
SER 243GLY 244 0.0000
GLY 244ASP 245 0.0495
ASP 245ASN 246 -0.0000
ASN 246GLY 247 0.1078
GLY 247TRP 248 -0.0002
TRP 248GLY 249 0.0464
GLY 249SER 250 -0.0003
SER 250TRP 251 0.0257
TRP 251ALA 252 -0.0001
ALA 252PRO 253 0.0164
PRO 253GLN 254 0.0001
GLN 254LEU 255 -0.0111
LEU 255GLY 256 0.0001
GLY 256ALA 257 -0.0358
ALA 257MET 258 -0.0003
MET 258SER 259 -0.2351
SER 259GLY 260 0.0001
GLY 260ASP 261 -0.4722
ASP 261ILE 262 0.0001
ILE 262VAL 263 -0.2443
VAL 263GLY 264 -0.0003
GLY 264ALA 265 -0.3477
ALA 265ILE 266 0.0003
ILE 266ARG 267 -0.4075

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.