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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 -0.0002
ALA 2PRO 3 0.0237
PRO 3TYR 4 -0.0001
TYR 4GLU 5 -0.0667
GLU 5ASN 6 -0.0001
ASN 6LEU 7 -0.0162
LEU 7MET 8 0.0002
MET 8VAL 9 -0.0292
VAL 9PRO 10 0.0002
PRO 10SER 11 -0.0728
SER 11PRO 12 -0.0003
PRO 12SER 13 -0.0933
SER 13MET 14 0.0004
MET 14GLY 15 0.1549
GLY 15ARG 16 0.0001
ARG 16ASP 17 -0.0100
ASP 17ILE 18 -0.0002
ILE 18PRO 19 -0.0118
PRO 19VAL 20 0.0002
VAL 20ALA 21 -0.0069
ALA 21PHE 22 0.0002
PHE 22LEU 23 0.0236
LEU 23ALA 24 -0.0001
ALA 24GLY 25 0.0603
GLY 25GLY 26 0.0003
GLY 26PRO 27 -0.0632
PRO 27HIS 28 -0.0002
HIS 28ALA 29 0.1153
ALA 29VAL 30 0.0001
VAL 30TYR 31 0.0467
TYR 31LEU 32 0.0002
LEU 32LEU 33 0.0835
LEU 33ASP 34 -0.0003
ASP 34ALA 35 0.1243
ALA 35PHE 36 -0.0002
PHE 36ASN 37 0.0661
ASN 37ALA 38 0.0001
ALA 38GLY 39 0.0022
GLY 39PRO 40 -0.0000
PRO 40ASP 41 0.0685
ASP 41VAL 42 -0.0001
VAL 42SER 43 -0.0941
SER 43ASN 44 0.0001
ASN 44TRP 45 0.1044
TRP 45VAL 46 0.0001
VAL 46THR 47 -0.0224
THR 47ALA 48 0.0004
ALA 48GLY 49 -0.0478
GLY 49ASN 50 0.0002
ASN 50ALA 51 -0.0477
ALA 51MET 52 0.0000
MET 52ASN 53 -0.0773
ASN 53THR 54 0.0002
THR 54LEU 55 0.0692
LEU 55ALA 56 0.0005
ALA 56GLY 57 0.0399
GLY 57LYS 58 0.0002
LYS 58GLY 59 0.1538
GLY 59ILE 60 0.0004
ILE 60SER 61 0.0462
SER 61VAL 62 -0.0001
VAL 62VAL 63 0.0341
VAL 63ALA 64 0.0000
ALA 64PRO 65 0.0605
PRO 65ALA 66 -0.0001
ALA 66GLY 67 0.1512
GLY 67GLY 68 0.0001
GLY 68ALA 69 -0.0136
ALA 69TYR 70 0.0002
TYR 70SER 71 -0.1099
SER 71MET 72 -0.0003
MET 72TYR 73 -0.0041
TYR 73THR 74 -0.0003
THR 74ASN 75 0.1085
ASN 75TRP 76 0.0002
TRP 76GLU 77 -0.1449
GLU 77GLN 78 0.0000
GLN 78ASP 79 0.1531
ASP 79GLY 80 0.0002
GLY 80SER 81 0.0058
SER 81LYS 82 0.0002
LYS 82GLN 83 -0.0149
GLN 83TRP 84 0.0000
TRP 84ASP 85 0.1699
ASP 85THR 86 0.0001
THR 86PHE 87 0.0196
PHE 87LEU 88 -0.0001
LEU 88SER 89 0.1136
SER 89ALA 90 -0.0002
ALA 90GLU 91 0.3236
GLU 91LEU 92 0.0002
LEU 92PRO 93 0.0555
PRO 93ASP 94 -0.0003
ASP 94TRP 95 0.1564
TRP 95LEU 96 -0.0003
LEU 96ALA 97 0.0542
ALA 97ALA 98 -0.0001
ALA 98ASN 99 0.0189
ASN 99ARG 100 -0.0000
ARG 100GLY 101 0.0143
GLY 101LEU 102 -0.0001
LEU 102ALA 103 -0.0760
ALA 103PRO 104 0.0004
PRO 104GLY 105 0.0753
GLY 105GLY 106 -0.0004
GLY 106HIS 107 0.1312
HIS 107ALA 108 -0.0005
ALA 108ALA 109 0.0107
ALA 109VAL 110 -0.0003
VAL 110GLY 111 0.1027
GLY 111ALA 112 -0.0002
ALA 112ALA 113 0.0801
ALA 113GLN 114 -0.0003
GLN 114GLY 115 0.0096
GLY 115GLY 116 0.0001
GLY 116TYR 117 -0.0252
TYR 117GLY 118 -0.0004
GLY 118ALA 119 -0.0825
ALA 119MET 120 -0.0001
MET 120ALA 121 -0.0365
ALA 121LEU 122 0.0002
LEU 122ALA 123 0.1286
ALA 123ALA 124 0.0004
ALA 124PHE 125 0.1729
PHE 125HIS 126 0.0005
HIS 126PRO 127 0.1660
PRO 127ASP 128 0.0000
ASP 128ARG 129 0.1481
ARG 129PHE 130 0.0000
PHE 130GLY 131 0.2194
GLY 131PHE 132 -0.0003
PHE 132ALA 133 -0.0811
ALA 133GLY 134 0.0001
GLY 134SER 135 0.0417
SER 135MET 136 -0.0004
MET 136SER 137 0.0932
SER 137GLY 138 -0.0001
GLY 138PHE 139 0.0631
PHE 139LEU 140 -0.0002
LEU 140TYR 141 0.0268
TYR 141PRO 142 -0.0002
PRO 142SER 143 0.1169
SER 143ASN 144 0.0000
ASN 144THR 145 -0.0408
THR 145THR 146 -0.0001
THR 146THR 147 -0.0350
THR 147ASN 148 0.0002
ASN 148GLY 149 -0.0127
GLY 149ALA 150 0.0004
ALA 150ILE 151 -0.0321
ILE 151ALA 152 -0.0003
ALA 152ALA 153 0.0441
ALA 153GLY 154 -0.0002
GLY 154MET 155 -0.0957
MET 155GLN 156 0.0005
GLN 156GLN 157 0.0151
GLN 157PHE 158 -0.0001
PHE 158GLY 159 -0.0073
GLY 159GLY 160 -0.0001
GLY 160VAL 161 -0.0506
VAL 161ASP 162 0.0002
ASP 162THR 163 -0.0489
THR 163ASN 164 0.0001
ASN 164GLY 165 -0.0580
GLY 165MET 166 -0.0001
MET 166TRP 167 0.0844
TRP 167GLY 168 -0.0003
GLY 168ALA 169 -0.0963
ALA 169PRO 170 -0.0001
PRO 170GLN 171 0.0988
GLN 171LEU 172 0.0000
LEU 172GLY 173 -0.2440
GLY 173ARG 174 0.0000
ARG 174TRP 175 0.0685
TRP 175LYS 176 -0.0003
LYS 176TRP 177 0.1344
TRP 177HIS 178 0.0002
HIS 178ASP 179 0.0564
ASP 179PRO 180 0.0000
PRO 180TRP 181 0.0196
TRP 181VAL 182 0.0000
VAL 182HIS 183 -0.1316
HIS 183ALA 184 0.0000
ALA 184SER 185 -0.0075
SER 185LEU 186 -0.0002
LEU 186LEU 187 -0.1240
LEU 187ALA 188 -0.0002
ALA 188GLN 189 0.1012
GLN 189ASN 190 0.0004
ASN 190ASN 191 0.0584
ASN 191THR 192 0.0002
THR 192ARG 193 -0.1992
ARG 193VAL 194 -0.0002
VAL 194TRP 195 -0.0812
TRP 195VAL 196 0.0001
VAL 196TRP 197 0.0041
TRP 197SER 198 0.0001
SER 198PRO 199 0.0323
PRO 199THR 200 0.0003
THR 200ASN 201 -0.0221
ASN 201PRO 202 0.0003
PRO 202GLY 203 -0.0898
GLY 203ALA 204 -0.0004
ALA 204SER 205 0.0080
SER 205ASP 206 -0.0002
ASP 206PRO 207 0.2232
PRO 207ALA 208 0.0000
ALA 208ALA 209 0.1274
ALA 209MET 210 0.0003
MET 210ILE 211 0.1054
ILE 211GLY 212 -0.0000
GLY 212GLN 213 -0.0452
GLN 213ALA 214 -0.0001
ALA 214ALA 215 0.0296
ALA 215GLU 216 -0.0003
GLU 216ALA 217 0.0585
ALA 217MET 218 -0.0004
MET 218GLY 219 0.0428
GLY 219ASN 220 -0.0001
ASN 220SER 221 0.0250
SER 221ARG 222 -0.0002
ARG 222MET 223 0.0394
MET 223PHE 224 0.0003
PHE 224TYR 225 0.0332
TYR 225ASN 226 -0.0003
ASN 226GLN 227 0.0143
GLN 227TYR 228 -0.0001
TYR 228ARG 229 0.0449
ARG 229SER 230 0.0002
SER 230VAL 231 0.0673
VAL 231GLY 232 0.0001
GLY 232GLY 233 -0.0502
GLY 233HIS 234 -0.0003
HIS 234ASN 235 -0.0703
ASN 235GLY 236 -0.0002
GLY 236HIS 237 -0.0317
HIS 237PHE 238 0.0001
PHE 238ASP 239 0.0143
ASP 239PHE 240 -0.0002
PHE 240PRO 241 0.0248
PRO 241ALA 242 0.0001
ALA 242SER 243 -0.0596
SER 243GLY 244 -0.0000
GLY 244ASP 245 -0.1650
ASP 245ASN 246 -0.0001
ASN 246GLY 247 0.0642
GLY 247TRP 248 0.0003
TRP 248GLY 249 -0.0994
GLY 249SER 250 0.0000
SER 250TRP 251 0.0418
TRP 251ALA 252 0.0001
ALA 252PRO 253 -0.0845
PRO 253GLN 254 -0.0002
GLN 254LEU 255 0.0389
LEU 255GLY 256 -0.0000
GLY 256ALA 257 -0.2751
ALA 257MET 258 0.0004
MET 258SER 259 -0.0644
SER 259GLY 260 0.0004
GLY 260ASP 261 -0.3984
ASP 261ILE 262 -0.0001
ILE 262VAL 263 -0.0162
VAL 263GLY 264 -0.0003
GLY 264ALA 265 -0.2533
ALA 265ILE 266 0.0001
ILE 266ARG 267 -0.2753

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.