CNRS Nantes University US2B US2B
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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 0.0004
ALA 2PRO 3 -0.0218
PRO 3TYR 4 0.0000
TYR 4GLU 5 -0.0758
GLU 5ASN 6 0.0004
ASN 6LEU 7 -0.1295
LEU 7MET 8 -0.0001
MET 8VAL 9 -0.0851
VAL 9PRO 10 -0.0001
PRO 10SER 11 -0.0882
SER 11PRO 12 0.0001
PRO 12SER 13 -0.1773
SER 13MET 14 -0.0002
MET 14GLY 15 -0.0992
GLY 15ARG 16 -0.0000
ARG 16ASP 17 -0.1202
ASP 17ILE 18 -0.0002
ILE 18PRO 19 -0.2045
PRO 19VAL 20 -0.0002
VAL 20ALA 21 -0.2092
ALA 21PHE 22 -0.0003
PHE 22LEU 23 -0.1026
LEU 23ALA 24 -0.0003
ALA 24GLY 25 -0.0351
GLY 25GLY 26 0.0002
GLY 26PRO 27 -0.0285
PRO 27HIS 28 -0.0000
HIS 28ALA 29 0.0974
ALA 29VAL 30 0.0000
VAL 30TYR 31 0.0604
TYR 31LEU 32 0.0001
LEU 32LEU 33 0.0280
LEU 33ASP 34 -0.0003
ASP 34ALA 35 0.2104
ALA 35PHE 36 -0.0002
PHE 36ASN 37 0.0798
ASN 37ALA 38 -0.0001
ALA 38GLY 39 0.1804
GLY 39PRO 40 -0.0002
PRO 40ASP 41 0.0379
ASP 41VAL 42 0.0002
VAL 42SER 43 0.0870
SER 43ASN 44 -0.0003
ASN 44TRP 45 -0.1209
TRP 45VAL 46 -0.0002
VAL 46THR 47 0.1615
THR 47ALA 48 0.0002
ALA 48GLY 49 -0.0504
GLY 49ASN 50 0.0004
ASN 50ALA 51 0.0471
ALA 51MET 52 0.0002
MET 52ASN 53 -0.1645
ASN 53THR 54 -0.0003
THR 54LEU 55 0.0575
LEU 55ALA 56 0.0004
ALA 56GLY 57 -0.0710
GLY 57LYS 58 0.0001
LYS 58GLY 59 0.0654
GLY 59ILE 60 -0.0001
ILE 60SER 61 -0.0302
SER 61VAL 62 0.0002
VAL 62VAL 63 0.0066
VAL 63ALA 64 -0.0001
ALA 64PRO 65 -0.1202
PRO 65ALA 66 -0.0001
ALA 66GLY 67 -0.0292
GLY 67GLY 68 -0.0000
GLY 68ALA 69 0.4425
ALA 69TYR 70 0.0001
TYR 70SER 71 0.0330
SER 71MET 72 0.0000
MET 72TYR 73 -0.0187
TYR 73THR 74 -0.0003
THR 74ASN 75 0.0165
ASN 75TRP 76 0.0002
TRP 76GLU 77 -0.2121
GLU 77GLN 78 0.0002
GLN 78ASP 79 -0.0551
ASP 79GLY 80 0.0003
GLY 80SER 81 -0.1374
SER 81LYS 82 0.0002
LYS 82GLN 83 0.1400
GLN 83TRP 84 0.0002
TRP 84ASP 85 0.2425
ASP 85THR 86 -0.0002
THR 86PHE 87 -0.1674
PHE 87LEU 88 -0.0002
LEU 88SER 89 0.0190
SER 89ALA 90 0.0003
ALA 90GLU 91 -0.1919
GLU 91LEU 92 -0.0002
LEU 92PRO 93 0.1275
PRO 93ASP 94 0.0002
ASP 94TRP 95 -0.1717
TRP 95LEU 96 0.0004
LEU 96ALA 97 0.0222
ALA 97ALA 98 0.0001
ALA 98ASN 99 0.0544
ASN 99ARG 100 -0.0003
ARG 100GLY 101 -0.1193
GLY 101LEU 102 0.0002
LEU 102ALA 103 -0.0712
ALA 103PRO 104 0.0003
PRO 104GLY 105 -0.0928
GLY 105GLY 106 -0.0002
GLY 106HIS 107 0.0347
HIS 107ALA 108 0.0002
ALA 108ALA 109 0.0492
ALA 109VAL 110 -0.0002
VAL 110GLY 111 0.0097
GLY 111ALA 112 0.0003
ALA 112ALA 113 0.0476
ALA 113GLN 114 -0.0003
GLN 114GLY 115 0.0042
GLY 115GLY 116 -0.0001
GLY 116TYR 117 0.0229
TYR 117GLY 118 -0.0003
GLY 118ALA 119 -0.0138
ALA 119MET 120 0.0002
MET 120ALA 121 -0.0176
ALA 121LEU 122 -0.0002
LEU 122ALA 123 0.0845
ALA 123ALA 124 0.0000
ALA 124PHE 125 0.0292
PHE 125HIS 126 0.0000
HIS 126PRO 127 0.0754
PRO 127ASP 128 0.0002
ASP 128ARG 129 -0.0714
ARG 129PHE 130 -0.0001
PHE 130GLY 131 -0.0125
GLY 131PHE 132 0.0001
PHE 132ALA 133 -0.0571
ALA 133GLY 134 -0.0004
GLY 134SER 135 -0.0688
SER 135MET 136 0.0002
MET 136SER 137 0.0042
SER 137GLY 138 -0.0001
GLY 138PHE 139 0.0594
PHE 139LEU 140 0.0002
LEU 140TYR 141 0.0628
TYR 141PRO 142 0.0001
PRO 142SER 143 0.0645
SER 143ASN 144 -0.0000
ASN 144THR 145 -0.0478
THR 145THR 146 0.0002
THR 146THR 147 -0.0250
THR 147ASN 148 -0.0004
ASN 148GLY 149 0.0092
GLY 149ALA 150 0.0001
ALA 150ILE 151 -0.0295
ILE 151ALA 152 -0.0000
ALA 152ALA 153 0.0259
ALA 153GLY 154 0.0000
GLY 154MET 155 -0.0424
MET 155GLN 156 0.0001
GLN 156GLN 157 -0.0763
GLN 157PHE 158 -0.0001
PHE 158GLY 159 -0.0492
GLY 159GLY 160 0.0003
GLY 160VAL 161 0.0596
VAL 161ASP 162 -0.0004
ASP 162THR 163 0.0549
THR 163ASN 164 0.0001
ASN 164GLY 165 -0.0303
GLY 165MET 166 0.0001
MET 166TRP 167 0.0131
TRP 167GLY 168 0.0001
GLY 168ALA 169 -0.2098
ALA 169PRO 170 -0.0002
PRO 170GLN 171 0.0931
GLN 171LEU 172 0.0000
LEU 172GLY 173 0.0532
GLY 173ARG 174 0.0001
ARG 174TRP 175 0.0917
TRP 175LYS 176 0.0000
LYS 176TRP 177 0.0481
TRP 177HIS 178 0.0001
HIS 178ASP 179 0.0610
ASP 179PRO 180 -0.0001
PRO 180TRP 181 -0.1457
TRP 181VAL 182 -0.0001
VAL 182HIS 183 -0.1594
HIS 183ALA 184 0.0002
ALA 184SER 185 0.0019
SER 185LEU 186 0.0001
LEU 186LEU 187 0.1146
LEU 187ALA 188 0.0001
ALA 188GLN 189 -0.0636
GLN 189ASN 190 0.0001
ASN 190ASN 191 -0.0065
ASN 191THR 192 0.0002
THR 192ARG 193 0.0332
ARG 193VAL 194 0.0000
VAL 194TRP 195 -0.0401
TRP 195VAL 196 0.0001
VAL 196TRP 197 -0.0780
TRP 197SER 198 -0.0001
SER 198PRO 199 -0.0426
PRO 199THR 200 0.0002
THR 200ASN 201 -0.0747
ASN 201PRO 202 -0.0002
PRO 202GLY 203 0.0058
GLY 203ALA 204 0.0000
ALA 204SER 205 0.1103
SER 205ASP 206 -0.0001
ASP 206PRO 207 -0.0529
PRO 207ALA 208 -0.0001
ALA 208ALA 209 -0.0970
ALA 209MET 210 -0.0001
MET 210ILE 211 -0.1502
ILE 211GLY 212 -0.0002
GLY 212GLN 213 -0.0462
GLN 213ALA 214 0.0001
ALA 214ALA 215 0.1042
ALA 215GLU 216 -0.0001
GLU 216ALA 217 0.0624
ALA 217MET 218 -0.0001
MET 218GLY 219 0.0953
GLY 219ASN 220 -0.0001
ASN 220SER 221 0.0617
SER 221ARG 222 0.0002
ARG 222MET 223 0.1239
MET 223PHE 224 -0.0002
PHE 224TYR 225 0.0433
TYR 225ASN 226 -0.0004
ASN 226GLN 227 0.0163
GLN 227TYR 228 0.0003
TYR 228ARG 229 0.0344
ARG 229SER 230 -0.0002
SER 230VAL 231 -0.1247
VAL 231GLY 232 0.0000
GLY 232GLY 233 0.0101
GLY 233HIS 234 0.0002
HIS 234ASN 235 -0.0276
ASN 235GLY 236 0.0003
GLY 236HIS 237 -0.0928
HIS 237PHE 238 -0.0000
PHE 238ASP 239 -0.1408
ASP 239PHE 240 -0.0005
PHE 240PRO 241 -0.0474
PRO 241ALA 242 0.0003
ALA 242SER 243 0.0815
SER 243GLY 244 -0.0002
GLY 244ASP 245 -0.0504
ASP 245ASN 246 -0.0003
ASN 246GLY 247 0.5110
GLY 247TRP 248 -0.0003
TRP 248GLY 249 0.0208
GLY 249SER 250 -0.0002
SER 250TRP 251 0.0914
TRP 251ALA 252 0.0001
ALA 252PRO 253 -0.0364
PRO 253GLN 254 -0.0003
GLN 254LEU 255 0.2011
LEU 255GLY 256 -0.0004
GLY 256ALA 257 0.1788
ALA 257MET 258 -0.0001
MET 258SER 259 0.1007
SER 259GLY 260 -0.0001
GLY 260ASP 261 0.0954
ASP 261ILE 262 0.0000
ILE 262VAL 263 -0.0244
VAL 263GLY 264 0.0001
GLY 264ALA 265 0.0308
ALA 265ILE 266 0.0002
ILE 266ARG 267 -0.0168

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.