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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 0.0002
ALA 2PRO 3 0.0019
PRO 3TYR 4 -0.0002
TYR 4GLU 5 0.0552
GLU 5ASN 6 -0.0003
ASN 6LEU 7 0.0290
LEU 7MET 8 0.0003
MET 8VAL 9 0.1134
VAL 9PRO 10 -0.0003
PRO 10SER 11 -0.2431
SER 11PRO 12 -0.0001
PRO 12SER 13 -0.1146
SER 13MET 14 0.0000
MET 14GLY 15 -0.1683
GLY 15ARG 16 0.0003
ARG 16ASP 17 -0.1365
ASP 17ILE 18 -0.0001
ILE 18PRO 19 0.0550
PRO 19VAL 20 -0.0000
VAL 20ALA 21 -0.0446
ALA 21PHE 22 -0.0001
PHE 22LEU 23 -0.1293
LEU 23ALA 24 0.0001
ALA 24GLY 25 -0.0373
GLY 25GLY 26 -0.0003
GLY 26PRO 27 0.0074
PRO 27HIS 28 0.0000
HIS 28ALA 29 -0.1198
ALA 29VAL 30 0.0002
VAL 30TYR 31 -0.1647
TYR 31LEU 32 0.0002
LEU 32LEU 33 -0.2594
LEU 33ASP 34 -0.0002
ASP 34ALA 35 -0.1796
ALA 35PHE 36 -0.0003
PHE 36ASN 37 -0.1383
ASN 37ALA 38 0.0003
ALA 38GLY 39 -0.1461
GLY 39PRO 40 0.0003
PRO 40ASP 41 -0.1754
ASP 41VAL 42 0.0003
VAL 42SER 43 0.0768
SER 43ASN 44 -0.0001
ASN 44TRP 45 -0.1069
TRP 45VAL 46 0.0004
VAL 46THR 47 -0.0115
THR 47ALA 48 0.0000
ALA 48GLY 49 0.0026
GLY 49ASN 50 -0.0000
ASN 50ALA 51 0.0496
ALA 51MET 52 0.0002
MET 52ASN 53 0.0229
ASN 53THR 54 -0.0002
THR 54LEU 55 -0.0583
LEU 55ALA 56 0.0001
ALA 56GLY 57 -0.0604
GLY 57LYS 58 -0.0003
LYS 58GLY 59 -0.0923
GLY 59ILE 60 -0.0001
ILE 60SER 61 0.0250
SER 61VAL 62 -0.0003
VAL 62VAL 63 -0.2045
VAL 63ALA 64 0.0001
ALA 64PRO 65 -0.2152
PRO 65ALA 66 -0.0004
ALA 66GLY 67 -0.2643
GLY 67GLY 68 0.0002
GLY 68ALA 69 -0.4434
ALA 69TYR 70 -0.0002
TYR 70SER 71 0.0854
SER 71MET 72 -0.0002
MET 72TYR 73 -0.0590
TYR 73THR 74 0.0004
THR 74ASN 75 0.1134
ASN 75TRP 76 0.0002
TRP 76GLU 77 -0.1049
GLU 77GLN 78 -0.0003
GLN 78ASP 79 -0.2629
ASP 79GLY 80 0.0001
GLY 80SER 81 -0.2023
SER 81LYS 82 0.0001
LYS 82GLN 83 0.0198
GLN 83TRP 84 0.0002
TRP 84ASP 85 0.1626
ASP 85THR 86 0.0001
THR 86PHE 87 -0.0134
PHE 87LEU 88 -0.0000
LEU 88SER 89 0.1074
SER 89ALA 90 -0.0000
ALA 90GLU 91 0.2399
GLU 91LEU 92 -0.0001
LEU 92PRO 93 -0.0541
PRO 93ASP 94 0.0003
ASP 94TRP 95 0.2377
TRP 95LEU 96 -0.0004
LEU 96ALA 97 0.0464
ALA 97ALA 98 -0.0001
ALA 98ASN 99 0.0746
ASN 99ARG 100 0.0002
ARG 100GLY 101 0.0626
GLY 101LEU 102 -0.0004
LEU 102ALA 103 0.0431
ALA 103PRO 104 0.0003
PRO 104GLY 105 0.0809
GLY 105GLY 106 0.0004
GLY 106HIS 107 -0.0318
HIS 107ALA 108 0.0001
ALA 108ALA 109 -0.1046
ALA 109VAL 110 0.0001
VAL 110GLY 111 -0.0409
GLY 111ALA 112 0.0001
ALA 112ALA 113 0.0037
ALA 113GLN 114 -0.0001
GLN 114GLY 115 -0.0319
GLY 115GLY 116 -0.0001
GLY 116TYR 117 0.0070
TYR 117GLY 118 -0.0001
GLY 118ALA 119 -0.0525
ALA 119MET 120 -0.0002
MET 120ALA 121 -0.0809
ALA 121LEU 122 -0.0000
LEU 122ALA 123 0.1556
ALA 123ALA 124 -0.0004
ALA 124PHE 125 0.0562
PHE 125HIS 126 0.0003
HIS 126PRO 127 0.1282
PRO 127ASP 128 -0.0001
ASP 128ARG 129 0.1425
ARG 129PHE 130 -0.0002
PHE 130GLY 131 0.2017
GLY 131PHE 132 0.0000
PHE 132ALA 133 0.0703
ALA 133GLY 134 0.0003
GLY 134SER 135 0.1210
SER 135MET 136 0.0005
MET 136SER 137 0.1214
SER 137GLY 138 0.0001
GLY 138PHE 139 0.0689
PHE 139LEU 140 -0.0004
LEU 140TYR 141 0.0969
TYR 141PRO 142 -0.0003
PRO 142SER 143 0.0662
SER 143ASN 144 -0.0001
ASN 144THR 145 0.0863
THR 145THR 146 -0.0001
THR 146THR 147 -0.0643
THR 147ASN 148 -0.0001
ASN 148GLY 149 0.0687
GLY 149ALA 150 -0.0002
ALA 150ILE 151 -0.0713
ILE 151ALA 152 0.0002
ALA 152ALA 153 0.1011
ALA 153GLY 154 0.0002
GLY 154MET 155 -0.0154
MET 155GLN 156 -0.0002
GLN 156GLN 157 0.0840
GLN 157PHE 158 -0.0000
PHE 158GLY 159 0.0092
GLY 159GLY 160 0.0000
GLY 160VAL 161 0.0743
VAL 161ASP 162 0.0001
ASP 162THR 163 0.1117
THR 163ASN 164 -0.0000
ASN 164GLY 165 -0.2889
GLY 165MET 166 0.0001
MET 166TRP 167 -0.0859
TRP 167GLY 168 -0.0002
GLY 168ALA 169 -0.3852
ALA 169PRO 170 0.0002
PRO 170GLN 171 0.1110
GLN 171LEU 172 0.0002
LEU 172GLY 173 0.0224
GLY 173ARG 174 0.0000
ARG 174TRP 175 0.1037
TRP 175LYS 176 0.0002
LYS 176TRP 177 0.1118
TRP 177HIS 178 -0.0001
HIS 178ASP 179 -0.0324
ASP 179PRO 180 0.0002
PRO 180TRP 181 0.0091
TRP 181VAL 182 0.0000
VAL 182HIS 183 0.0263
HIS 183ALA 184 -0.0001
ALA 184SER 185 -0.0793
SER 185LEU 186 -0.0000
LEU 186LEU 187 -0.0826
LEU 187ALA 188 0.0001
ALA 188GLN 189 0.0024
GLN 189ASN 190 0.0002
ASN 190ASN 191 -0.0451
ASN 191THR 192 0.0002
THR 192ARG 193 -0.1853
ARG 193VAL 194 0.0001
VAL 194TRP 195 -0.1164
TRP 195VAL 196 -0.0004
VAL 196TRP 197 -0.0907
TRP 197SER 198 -0.0004
SER 198PRO 199 0.0065
PRO 199THR 200 -0.0000
THR 200ASN 201 -0.0829
ASN 201PRO 202 0.0002
PRO 202GLY 203 -0.0913
GLY 203ALA 204 0.0000
ALA 204SER 205 -0.0270
SER 205ASP 206 -0.0004
ASP 206PRO 207 0.0303
PRO 207ALA 208 0.0003
ALA 208ALA 209 -0.0272
ALA 209MET 210 -0.0001
MET 210ILE 211 0.1036
ILE 211GLY 212 0.0003
GLY 212GLN 213 -0.0225
GLN 213ALA 214 -0.0002
ALA 214ALA 215 -0.0248
ALA 215GLU 216 -0.0001
GLU 216ALA 217 0.0710
ALA 217MET 218 0.0005
MET 218GLY 219 0.0066
GLY 219ASN 220 0.0000
ASN 220SER 221 0.2049
SER 221ARG 222 0.0001
ARG 222MET 223 0.0273
MET 223PHE 224 0.0001
PHE 224TYR 225 0.0802
TYR 225ASN 226 0.0002
ASN 226GLN 227 0.0361
GLN 227TYR 228 -0.0003
TYR 228ARG 229 0.0872
ARG 229SER 230 0.0001
SER 230VAL 231 0.0992
VAL 231GLY 232 -0.0001
GLY 232GLY 233 0.0545
GLY 233HIS 234 0.0001
HIS 234ASN 235 0.2422
ASN 235GLY 236 0.0004
GLY 236HIS 237 -0.3981
HIS 237PHE 238 -0.0001
PHE 238ASP 239 -0.2970
ASP 239PHE 240 0.0003
PHE 240PRO 241 -0.1749
PRO 241ALA 242 -0.0003
ALA 242SER 243 0.0042
SER 243GLY 244 -0.0001
GLY 244ASP 245 0.0171
ASP 245ASN 246 -0.0000
ASN 246GLY 247 -0.1418
GLY 247TRP 248 0.0003
TRP 248GLY 249 0.0949
GLY 249SER 250 0.0003
SER 250TRP 251 0.0737
TRP 251ALA 252 -0.0001
ALA 252PRO 253 -0.0066
PRO 253GLN 254 0.0003
GLN 254LEU 255 0.2196
LEU 255GLY 256 0.0000
GLY 256ALA 257 0.1436
ALA 257MET 258 -0.0003
MET 258SER 259 0.2531
SER 259GLY 260 -0.0001
GLY 260ASP 261 0.2459
ASP 261ILE 262 0.0001
ILE 262VAL 263 0.1532
VAL 263GLY 264 -0.0003
GLY 264ALA 265 0.1404
ALA 265ILE 266 0.0001
ILE 266ARG 267 0.0673

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.