Should you encounter any unexpected behaviour,
please let us know.

* 2QLE_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000 *

CA strain for 240220090021146876

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLY 1 GLU 2 0.0001

GLU 2 GLU 3 0.0257

GLU 3 LEU 4 -0.0001

LEU 4 PHE 5 0.0579

PHE 5 THR 6 -0.0000

THR 6 GLY 7 -0.0726

GLY 7 VAL 8 0.0001

VAL 8 VAL 9 0.1154

VAL 9 PRO 10 0.0001

PRO 10 ILE 11 0.0427

ILE 11 LEU 12 -0.0001

LEU 12 VAL 13 -0.0274

VAL 13 GLU 14 -0.0001

GLU 14 LEU 15 -0.0976

LEU 15 ASP 16 0.0000

ASP 16 GLY 17 -0.1082

GLY 17 ASP 18 0.0003

ASP 18 VAL 19 -0.0671

VAL 19 ASN 20 -0.0001

ASN 20 GLY 21 -0.0523

GLY 21 HIS 22 0.0002

HIS 22 LYS 23 -0.0829

LYS 23 PHE 24 -0.0000

PHE 24 SER 25 -0.1280

SER 25 VAL 26 0.0000

VAL 26 SER 27 -0.1053

SER 27 GLY 28 0.0001

GLY 28 GLU 29 -0.0303

GLU 29 GLY 30 0.0001

GLY 30 GLU 31 -0.3103

GLU 31 GLY 32 -0.0000

GLY 32 ASP 33 -0.1167

ASP 33 ALA 34 0.0001

ALA 34 THR 35 0.0234

THR 35 TYR 36 -0.0001

TYR 36 GLY 37 0.0271

GLY 37 LYS 38 -0.0004

LYS 38 LEU 39 -0.1370

LEU 39 THR 40 -0.0000

THR 40 LEU 41 -0.1131

LEU 41 LYS 42 0.0001

LYS 42 PHE 43 -0.0732

PHE 43 ILE 44 0.0001

ILE 44 CYS 45 -0.1058

CYS 45 THR 46 -0.0001

THR 46 THR 47 -0.0335

THR 47 GLY 48 0.0002

GLY 48 LYS 49 0.0527

LYS 49 LEU 50 -0.0005

LEU 50 PRO 51 0.0053

PRO 51 VAL 52 0.0000

VAL 52 PRO 53 -0.0411

PRO 53 TRP 54 0.0002

TRP 54 PRO 55 0.1152

PRO 55 THR 56 0.0000

THR 56 LEU 57 -0.0787

LEU 57 VAL 58 -0.0000

VAL 58 THR 59 0.0763

THR 59 THR 60 -0.0001

THR 60 PHE 61 0.0041

PHE 61 VAL 62 -0.0002

VAL 62 GLN 63 -0.0920

GLN 63 CYS 64 -0.0001

CYS 64 PHE 65 0.0077

PHE 65 SER 66 -0.0003

SER 66 ARG 67 -0.0709

ARG 67 TYR 68 -0.0003

TYR 68 PRO 69 -0.1133

PRO 69 ASP 70 -0.0000

ASP 70 HIS 71 -0.0197

HIS 71 MET 72 0.0002

MET 72 LYS 73 -0.1104

LYS 73 ARG 74 -0.0001

ARG 74 HIS 75 0.0468

HIS 75 ASP 76 -0.0000

ASP 76 PHE 77 0.0205

PHE 77 PHE 78 -0.0001

PHE 78 LYS 79 0.1039

LYS 79 SER 80 -0.0001

SER 80 ALA 81 -0.0363

ALA 81 MET 82 -0.0004

MET 82 PRO 83 -0.1098

PRO 83 GLU 84 -0.0003

GLU 84 GLY 85 0.0966

GLY 85 TYR 86 -0.0000

TYR 86 VAL 87 0.1858

VAL 87 GLN 88 0.0000

GLN 88 GLU 89 0.1344

GLU 89 ARG 90 -0.0000

ARG 90 THR 91 0.2318

THR 91 ILE 92 0.0004

ILE 92 PHE 93 0.0617

PHE 93 PHE 94 0.0000

PHE 94 LYS 95 0.0127

LYS 95 ASP 96 0.0004

ASP 96 ASP 97 -0.0460

ASP 97 GLY 98 0.0001

GLY 98 ASN 99 0.0995

ASN 99 TYR 100 -0.0003

TYR 100 LYS 101 0.1248

LYS 101 THR 102 0.0001

THR 102 ARG 103 0.1382

ARG 103 ALA 104 -0.0002

ALA 104 GLU 105 0.1297

GLU 105 VAL 106 0.0001

VAL 106 LYS 107 0.1278

LYS 107 PHE 108 0.0003

PHE 108 GLU 109 -0.0047

GLU 109 GLY 110 0.0001

GLY 110 ASP 111 0.0206

ASP 111 THR 112 0.0001

THR 112 LEU 113 0.1074

LEU 113 VAL 114 0.0002

VAL 114 ASN 115 0.0882

ASN 115 ARG 116 -0.0001

ARG 116 ILE 117 0.0319

ILE 117 GLU 118 0.0001

GLU 118 LEU 119 0.0056

LEU 119 LYS 120 -0.0002

LYS 120 GLY 121 -0.0066

GLY 121 ILE 122 0.0002

ILE 122 ASP 123 0.0196

ASP 123 PHE 124 0.0000

PHE 124 LYS 125 0.0918

LYS 125 GLU 126 0.0001

GLU 126 ASP 127 -0.0268

ASP 127 GLY 128 -0.0000

GLY 128 ASN 129 -0.0381

ASN 129 ILE 130 -0.0004

ILE 130 LEU 131 0.0111

LEU 131 GLY 132 0.0001

GLY 132 HIS 133 -0.0571

HIS 133 LYS 134 -0.0002

LYS 134 LEU 135 -0.0641

LEU 135 GLU 136 0.0004

GLU 136 TYR 137 -0.0518

TYR 137 ASN 138 0.0001

ASN 138 TYR 139 0.1950

TYR 139 ASN 140 -0.0000

ASN 140 SER 141 0.0625

SER 141 HIS 142 0.0001

HIS 142 ASN 143 0.2724

ASN 143 VAL 144 -0.0001

VAL 144 TYR 145 -0.0088

TYR 145 ILE 146 0.0000

ILE 146 MET 147 -0.0891

MET 147 ALA 148 -0.0000

ALA 148 ASP 149 -0.0800

ASP 149 LYS 150 -0.0002

LYS 150 GLN 151 -0.0327

GLN 151 LYS 152 0.0003

LYS 152 ASN 153 -0.0384

ASN 153 GLY 154 0.0001

GLY 154 ILE 155 0.1357

ILE 155 LYS 156 -0.0000

LYS 156 VAL 157 0.2099

VAL 157 ASN 158 0.0000

ASN 158 PHE 159 0.3666

PHE 159 LYS 160 0.0000

LYS 160 ILE 161 0.1573

ILE 161 ARG 162 0.0002

ARG 162 HIS 163 0.1375

HIS 163 ASN 164 -0.0001

ASN 164 ILE 165 -0.0306

ILE 165 GLU 166 -0.0000

GLU 166 ASP 167 -0.0427

ASP 167 GLY 168 -0.0000

GLY 168 SER 169 0.0382

SER 169 VAL 170 -0.0004

VAL 170 GLN 171 -0.0206

GLN 171 LEU 172 0.0004

LEU 172 ALA 173 0.1169

ALA 173 ASP 174 0.0002

ASP 174 HIS 175 0.1598

HIS 175 TYR 176 -0.0004

TYR 176 GLN 177 0.3102

GLN 177 GLN 178 0.0001

GLN 178 ASN 179 0.1085

ASN 179 THR 180 -0.0001

THR 180 PRO 181 0.1540

PRO 181 ILE 182 -0.0001

ILE 182 GLY 183 0.0084

GLY 183 ASP 184 0.0000

ASP 184 GLY 185 -0.0479

GLY 185 PRO 186 -0.0001

PRO 186 VAL 187 0.0843

VAL 187 LEU 188 -0.0004

LEU 188 LEU 189 -0.0273

LEU 189 PRO 190 0.0002

PRO 190 ASP 191 -0.1022

ASP 191 ASN 192 0.0003

ASN 192 HIS 193 -0.0951

HIS 193 TYR 194 0.0001

TYR 194 LEU 195 -0.0163

LEU 195 SER 196 0.0002

SER 196 THR 197 0.0585

THR 197 GLN 198 -0.0003

GLN 198 VAL 199 0.0664

VAL 199 ALA 200 0.0001

ALA 200 LEU 201 -0.0174

LEU 201 SER 202 0.0001

SER 202 LYS 203 0.0405

LYS 203 ASP 204 0.0000

ASP 204 PRO 205 -0.0909

PRO 205 ASN 206 -0.0000

ASN 206 GLU 207 0.0099

GLU 207 LYS 208 -0.0001

LYS 208 ARG 209 0.3211

ARG 209 ASP 210 -0.0002

ASP 210 HIS 211 -0.1091

HIS 211 MET 212 0.0001

MET 212 VAL 213 -0.1957

VAL 213 LEU 214 -0.0002

LEU 214 LEU 215 -0.1109

LEU 215 GLU 216 -0.0002

GLU 216 PHE 217 -0.0988

PHE 217 VAL 218 -0.0000

VAL 218 THR 219 -0.0890

THR 219 ALA 220 0.0001

ALA 220 ALA 221 -0.0680

ALA 221 GLY 222 0.0002

GLY 222 ILE 223 0.2273

ILE 223 THR 224 -0.0002

THR 224 HIS 225 0.2156

HIS 225 GLY 226 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 2QLE_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000 ***

CA strain for 240220090021146876

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* 2QLE_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000 *