Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *

CA strain for 240220091312161517

--- normal mode 10 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 1 GLU 2 -0.0002

GLU 2 ALA 3 -0.0027

ALA 3 GLU 4 0.0001

GLU 4 PHE 5 -0.0417

PHE 5 ASN 6 -0.0002

ASN 6 ASN 7 0.0473

ASN 7 TYR 8 0.0004

TYR 8 CYS 9 0.1170

CYS 9 LYS 10 0.0000

LYS 10 ILE 11 -0.0798

ILE 11 LYS 12 0.0002

LYS 12 CYS 13 -0.1377

CYS 13 LEU 14 -0.0001

LEU 14 LYS 15 -0.1423

LYS 15 GLY 16 -0.0001

GLY 16 GLY 17 0.1157

GLY 17 VAL 18 -0.0002

VAL 18 HIS 19 0.0655

HIS 19 THR 20 -0.0000

THR 20 ALA 21 -0.0435

ALA 21 CYS 22 -0.0003

CYS 22 LYS 23 -0.2824

LYS 23 TYR 24 0.0000

TYR 24 GLY 25 -0.0907

GLY 25 SER 26 0.0001

SER 26 LEU 27 0.1661

LEU 27 LYS 28 0.0000

LYS 28 PRO 29 0.1253

PRO 29 ASN 30 -0.0000

ASN 30 CYS 31 -0.1155

CYS 31 GLY 32 -0.0001

GLY 32 ASN 33 -0.1379

ASN 33 LYS 34 0.0002

LYS 34 VAL 35 -0.1088

VAL 35 VAL 36 0.0001

VAL 36 VAL 37 -0.0420

VAL 37 SER 38 0.0001

SER 38 TYR 39 0.3408

TYR 39 GLY 40 -0.0001

GLY 40 LEU 41 -0.2549

LEU 41 THR 42 0.0005

THR 42 LYS 43 0.0121

LYS 43 GLN 44 -0.0002

GLN 44 GLU 45 0.0362

GLU 45 LYS 46 -0.0003

LYS 46 GLN 47 0.0048

GLN 47 ASP 48 -0.0002

ASP 48 ILE 49 -0.0387

ILE 49 LEU 50 0.0001

LEU 50 LYS 51 0.0834

LYS 51 GLU 52 -0.0001

GLU 52 HIS 53 -0.0134

HIS 53 ASN 54 -0.0001

ASN 54 ASP 55 0.0694

ASP 55 PHE 56 0.0002

PHE 56 ARG 57 -0.0372

ARG 57 GLN 58 0.0002

GLN 58 LYS 59 0.1363

LYS 59 ILE 60 0.0003

ILE 60 ALA 61 -0.0128

ALA 61 ARG 62 0.0002

ARG 62 GLY 63 0.0303

GLY 63 LEU 64 -0.0002

LEU 64 GLU 65 -0.0429

GLU 65 THR 66 -0.0000

THR 66 ARG 67 0.0033

ARG 67 GLY 68 0.0001

GLY 68 ASN 69 0.0284

ASN 69 PRO 70 0.0002

PRO 70 GLY 71 0.0480

GLY 71 PRO 72 -0.0000

PRO 72 GLN 73 0.0007

GLN 73 PRO 74 0.0003

PRO 74 PRO 75 0.0314

PRO 75 ALA 76 0.0003

ALA 76 LYS 77 -0.0344

LYS 77 ASN 78 0.0003

ASN 78 MET 79 -0.0670

MET 79 LYS 80 -0.0003

LYS 80 ASN 81 -0.0353

ASN 81 LEU 82 -0.0002

LEU 82 VAL 83 0.0295

VAL 83 TRP 84 0.0000

TRP 84 ASN 85 0.1979

ASN 85 ASP 86 0.0002

ASP 86 GLU 87 0.3343

GLU 87 LEU 88 0.0004

LEU 88 ALA 89 0.0964

ALA 89 TYR 90 -0.0001

TYR 90 VAL 91 0.0067

VAL 91 ALA 92 0.0002

ALA 92 GLN 93 0.0673

GLN 93 VAL 94 0.0000

VAL 94 TRP 95 -0.0001

TRP 95 ALA 96 -0.0001

ALA 96 ASN 97 0.0163

ASN 97 GLN 98 -0.0000

GLN 98 CYS 99 -0.1775

CYS 99 GLN 100 0.0000

GLN 100 TYR 101 0.2060

TYR 101 GLY 102 0.0003

GLY 102 HIS 103 -0.4804

HIS 103 ASP 104 0.0002

ASP 104 THR 105 -0.2717

THR 105 CYS 106 -0.0000

CYS 106 ARG 107 0.1046

ARG 107 ASP 108 -0.0002

ASP 108 VAL 109 -0.0054

VAL 109 ALA 110 -0.0001

ALA 110 LYS 111 -0.0018

LYS 111 TYR 112 -0.0001

TYR 112 GLN 113 0.0567

GLN 113 VAL 114 0.0002

VAL 114 GLY 115 -0.2239

GLY 115 GLN 116 0.0004

GLN 116 ASN 117 -0.1800

ASN 117 VAL 118 0.0000

VAL 118 ALA 119 -0.4136

ALA 119 LEU 120 -0.0003

LEU 120 THR 121 -0.6261

THR 121 GLY 122 0.0003

GLY 122 SER 123 -0.4163

SER 123 THR 124 0.0002

THR 124 ALA 125 -0.0082

ALA 125 ALA 126 0.0001

ALA 126 LYS 127 0.0284

LYS 127 TYR 128 0.0000

TYR 128 ASP 129 -0.0440

ASP 129 ASP 130 0.0001

ASP 130 PRO 131 0.0565

PRO 131 VAL 132 0.0002

VAL 132 LYS 133 0.0641

LYS 133 LEU 134 0.0001

LEU 134 VAL 135 -0.1352

VAL 135 LYS 136 0.0003

LYS 136 MET 137 0.0524

MET 137 TRP 138 -0.0003

TRP 138 GLU 139 -0.0962

GLU 139 ASP 140 -0.0001

ASP 140 GLU 141 0.0320

GLU 141 VAL 142 -0.0000

VAL 142 LYS 143 0.0014

LYS 143 ASP 144 0.0002

ASP 144 TYR 145 0.0192

TYR 145 ASN 146 -0.0001

ASN 146 PRO 147 0.0333

PRO 147 LYS 148 0.0000

LYS 148 LYS 149 -0.0146

LYS 149 LYS 150 -0.0001

LYS 150 PHE 151 -0.0128

PHE 151 SER 152 -0.0000

SER 152 GLY 153 0.0437

GLY 153 ASN 154 -0.0001

ASN 154 ASP 155 0.0395

ASP 155 PHE 156 -0.0002

PHE 156 LEU 157 -0.0396

LEU 157 LYS 158 -0.0003

LYS 158 THR 159 0.0049

THR 159 GLY 160 -0.0003

GLY 160 HIS 161 0.0081

HIS 161 TYR 162 -0.0004

TYR 162 THR 163 0.0049

THR 163 GLN 164 0.0000

GLN 164 MET 165 -0.0090

MET 165 VAL 166 -0.0001

VAL 166 TRP 167 -0.0344

TRP 167 ALA 168 0.0003

ALA 168 ASN 169 0.0278

ASN 169 THR 170 -0.0000

THR 170 LYS 171 -0.0526

LYS 171 GLU 172 -0.0001

GLU 172 VAL 173 0.0042

VAL 173 GLY 174 -0.0003

GLY 174 CYS 175 0.0036

CYS 175 GLY 176 0.0000

GLY 176 SER 177 0.2074

SER 177 ILE 178 -0.0003

ILE 178 LYS 179 0.2837

LYS 179 TYR 180 0.0003

TYR 180 ILE 181 0.1395

ILE 181 GLN 182 0.0002

GLN 182 GLU 183 0.0226

GLU 183 LYS 184 -0.0001

LYS 184 TRP 185 0.0932

TRP 185 HIS 186 0.0002

HIS 186 LYS 187 -0.0985

LYS 187 HIS 188 -0.0002

HIS 188 TYR 189 -0.2590

TYR 189 LEU 190 -0.0003

LEU 190 VAL 191 -0.0490

VAL 191 CYS 192 -0.0000

CYS 192 ASN 193 0.0113

ASN 193 TYR 194 0.0003

TYR 194 GLY 195 0.0088

GLY 195 PRO 196 -0.0002

PRO 196 SER 197 -0.1176

SER 197 GLY 198 -0.0002

GLY 198 ASN 199 -0.1584

ASN 199 PHE 200 0.0001

PHE 200 LYS 201 -0.1268

LYS 201 ASN 202 -0.0002

ASN 202 GLU 203 -0.0101

GLU 203 GLU 204 -0.0001

GLU 204 LEU 205 -0.0126

LEU 205 TYR 206 0.0000

TYR 206 GLN 207 0.0309

GLN 207 THR 208 -0.0001

THR 208 LYS 209 0.0076

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 ***

CA strain for 240220091312161517

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *