Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *

CA strain for 240220091312161517

--- normal mode 14 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 1 GLU 2 0.0003

GLU 2 ALA 3 -0.0860

ALA 3 GLU 4 -0.0000

GLU 4 PHE 5 -0.0282

PHE 5 ASN 6 0.0000

ASN 6 ASN 7 0.0766

ASN 7 TYR 8 0.0004

TYR 8 CYS 9 0.1585

CYS 9 LYS 10 -0.0000

LYS 10 ILE 11 -0.0543

ILE 11 LYS 12 -0.0001

LYS 12 CYS 13 -0.1204

CYS 13 LEU 14 0.0001

LEU 14 LYS 15 -0.1232

LYS 15 GLY 16 0.0002

GLY 16 GLY 17 0.0202

GLY 17 VAL 18 0.0002

VAL 18 HIS 19 0.1013

HIS 19 THR 20 0.0002

THR 20 ALA 21 0.0376

ALA 21 CYS 22 0.0003

CYS 22 LYS 23 -0.2384

LYS 23 TYR 24 -0.0002

TYR 24 GLY 25 0.1115

GLY 25 SER 26 0.0001

SER 26 LEU 27 -0.1389

LEU 27 LYS 28 0.0003

LYS 28 PRO 29 0.1226

PRO 29 ASN 30 0.0003

ASN 30 CYS 31 0.1436

CYS 31 GLY 32 -0.0000

GLY 32 ASN 33 0.0202

ASN 33 LYS 34 -0.0000

LYS 34 VAL 35 0.1896

VAL 35 VAL 36 0.0001

VAL 36 VAL 37 -0.0738

VAL 37 SER 38 -0.0002

SER 38 TYR 39 -0.1357

TYR 39 GLY 40 0.0001

GLY 40 LEU 41 0.3730

LEU 41 THR 42 0.0002

THR 42 LYS 43 -0.2108

LYS 43 GLN 44 0.0000

GLN 44 GLU 45 -0.2128

GLU 45 LYS 46 0.0002

LYS 46 GLN 47 -0.1465

GLN 47 ASP 48 -0.0000

ASP 48 ILE 49 -0.1476

ILE 49 LEU 50 0.0002

LEU 50 LYS 51 -0.0035

LYS 51 GLU 52 -0.0000

GLU 52 HIS 53 0.0810

HIS 53 ASN 54 0.0002

ASN 54 ASP 55 -0.0466

ASP 55 PHE 56 -0.0002

PHE 56 ARG 57 0.0161

ARG 57 GLN 58 -0.0002

GLN 58 LYS 59 -0.0525

LYS 59 ILE 60 -0.0002

ILE 60 ALA 61 0.0192

ALA 61 ARG 62 0.0001

ARG 62 GLY 63 0.0361

GLY 63 LEU 64 0.0003

LEU 64 GLU 65 0.1120

GLU 65 THR 66 -0.0001

THR 66 ARG 67 0.0861

ARG 67 GLY 68 -0.0004

GLY 68 ASN 69 -0.0287

ASN 69 PRO 70 -0.0000

PRO 70 GLY 71 0.1066

GLY 71 PRO 72 0.0004

PRO 72 GLN 73 0.0835

GLN 73 PRO 74 -0.0001

PRO 74 PRO 75 -0.0232

PRO 75 ALA 76 0.0000

ALA 76 LYS 77 -0.0205

LYS 77 ASN 78 -0.0002

ASN 78 MET 79 0.1315

MET 79 LYS 80 0.0000

LYS 80 ASN 81 0.2541

ASN 81 LEU 82 0.0001

LEU 82 VAL 83 0.0550

VAL 83 TRP 84 0.0001

TRP 84 ASN 85 0.1328

ASN 85 ASP 86 -0.0005

ASP 86 GLU 87 0.4418

GLU 87 LEU 88 -0.0000

LEU 88 ALA 89 0.2348

ALA 89 TYR 90 -0.0000

TYR 90 VAL 91 0.1126

VAL 91 ALA 92 -0.0003

ALA 92 GLN 93 0.0162

GLN 93 VAL 94 -0.0001

VAL 94 TRP 95 0.1185

TRP 95 ALA 96 0.0001

ALA 96 ASN 97 -0.0599

ASN 97 GLN 98 -0.0001

GLN 98 CYS 99 0.0171

CYS 99 GLN 100 -0.0001

GLN 100 TYR 101 -0.0789

TYR 101 GLY 102 0.0001

GLY 102 HIS 103 -0.2027

HIS 103 ASP 104 -0.0003

ASP 104 THR 105 -0.3561

THR 105 CYS 106 -0.0000

CYS 106 ARG 107 0.0919

ARG 107 ASP 108 -0.0003

ASP 108 VAL 109 -0.0640

VAL 109 ALA 110 -0.0001

ALA 110 LYS 111 0.0132

LYS 111 TYR 112 -0.0001

TYR 112 GLN 113 0.1236

GLN 113 VAL 114 0.0000

VAL 114 GLY 115 -0.1299

GLY 115 GLN 116 0.0000

GLN 116 ASN 117 -0.0655

ASN 117 VAL 118 0.0002

VAL 118 ALA 119 0.0905

ALA 119 LEU 120 0.0002

LEU 120 THR 121 0.5965

THR 121 GLY 122 0.0002

GLY 122 SER 123 0.5849

SER 123 THR 124 0.0001

THR 124 ALA 125 0.0363

ALA 125 ALA 126 -0.0001

ALA 126 LYS 127 0.1106

LYS 127 TYR 128 0.0001

TYR 128 ASP 129 0.2777

ASP 129 ASP 130 -0.0001

ASP 130 PRO 131 0.0992

PRO 131 VAL 132 -0.0001

VAL 132 LYS 133 -0.0676

LYS 133 LEU 134 -0.0002

LEU 134 VAL 135 0.2206

VAL 135 LYS 136 0.0003

LYS 136 MET 137 0.0360

MET 137 TRP 138 0.0000

TRP 138 GLU 139 -0.0571

GLU 139 ASP 140 0.0002

ASP 140 GLU 141 -0.0891

GLU 141 VAL 142 -0.0005

VAL 142 LYS 143 0.0586

LYS 143 ASP 144 0.0001

ASP 144 TYR 145 -0.0270

TYR 145 ASN 146 0.0002

ASN 146 PRO 147 -0.0583

PRO 147 LYS 148 0.0000

LYS 148 LYS 149 0.0183

LYS 149 LYS 150 0.0001

LYS 150 PHE 151 0.1384

PHE 151 SER 152 -0.0002

SER 152 GLY 153 -0.0378

GLY 153 ASN 154 0.0000

ASN 154 ASP 155 -0.0563

ASP 155 PHE 156 0.0003

PHE 156 LEU 157 -0.1019

LEU 157 LYS 158 0.0003

LYS 158 THR 159 0.0134

THR 159 GLY 160 0.0002

GLY 160 HIS 161 0.0656

HIS 161 TYR 162 0.0004

TYR 162 THR 163 0.0171

THR 163 GLN 164 -0.0001

GLN 164 MET 165 -0.0178

MET 165 VAL 166 0.0003

VAL 166 TRP 167 0.0128

TRP 167 ALA 168 -0.0003

ALA 168 ASN 169 0.0273

ASN 169 THR 170 -0.0004

THR 170 LYS 171 0.1336

LYS 171 GLU 172 -0.0002

GLU 172 VAL 173 0.0370

VAL 173 GLY 174 -0.0000

GLY 174 CYS 175 -0.1070

CYS 175 GLY 176 -0.0001

GLY 176 SER 177 0.0300

SER 177 ILE 178 -0.0000

ILE 178 LYS 179 -0.1454

LYS 179 TYR 180 0.0002

TYR 180 ILE 181 -0.0257

ILE 181 GLN 182 -0.0003

GLN 182 GLU 183 -0.0149

GLU 183 LYS 184 0.0001

LYS 184 TRP 185 -0.0142

TRP 185 HIS 186 -0.0001

HIS 186 LYS 187 0.1109

LYS 187 HIS 188 -0.0001

HIS 188 TYR 189 0.0962

TYR 189 LEU 190 0.0001

LEU 190 VAL 191 0.0338

VAL 191 CYS 192 0.0000

CYS 192 ASN 193 0.0333

ASN 193 TYR 194 -0.0004

TYR 194 GLY 195 -0.0867

GLY 195 PRO 196 0.0000

PRO 196 SER 197 0.0653

SER 197 GLY 198 -0.0004

GLY 198 ASN 199 0.1625

ASN 199 PHE 200 0.0002

PHE 200 LYS 201 0.4326

LYS 201 ASN 202 -0.0001

ASN 202 GLU 203 -0.2694

GLU 203 GLU 204 -0.0001

GLU 204 LEU 205 0.0025

LEU 205 TYR 206 -0.0001

TYR 206 GLN 207 0.0001

GLN 207 THR 208 0.0002

THR 208 LYS 209 -0.0883

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 ***

CA strain for 240220091312161517

--- normal mode 14 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *