Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *

CA strain for 240220091312161517

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 1 GLU 2 0.0001

GLU 2 ALA 3 -0.0123

ALA 3 GLU 4 -0.0000

GLU 4 PHE 5 0.0307

PHE 5 ASN 6 -0.0001

ASN 6 ASN 7 0.0123

ASN 7 TYR 8 -0.0000

TYR 8 CYS 9 -0.0475

CYS 9 LYS 10 0.0000

LYS 10 ILE 11 0.0458

ILE 11 LYS 12 0.0003

LYS 12 CYS 13 0.0804

CYS 13 LEU 14 -0.0002

LEU 14 LYS 15 0.0505

LYS 15 GLY 16 -0.0004

GLY 16 GLY 17 -0.0355

GLY 17 VAL 18 -0.0000

VAL 18 HIS 19 -0.0289

HIS 19 THR 20 0.0001

THR 20 ALA 21 0.0284

ALA 21 CYS 22 0.0000

CYS 22 LYS 23 0.0308

LYS 23 TYR 24 0.0000

TYR 24 GLY 25 0.0491

GLY 25 SER 26 -0.0005

SER 26 LEU 27 -0.0474

LEU 27 LYS 28 -0.0002

LYS 28 PRO 29 0.0718

PRO 29 ASN 30 0.0001

ASN 30 CYS 31 0.0637

CYS 31 GLY 32 -0.0003

GLY 32 ASN 33 0.0127

ASN 33 LYS 34 -0.0000

LYS 34 VAL 35 -0.0103

VAL 35 VAL 36 0.0001

VAL 36 VAL 37 -0.0495

VAL 37 SER 38 0.0004

SER 38 TYR 39 0.1722

TYR 39 GLY 40 0.0003

GLY 40 LEU 41 0.0050

LEU 41 THR 42 -0.0001

THR 42 LYS 43 0.0193

LYS 43 GLN 44 -0.0000

GLN 44 GLU 45 0.0252

GLU 45 LYS 46 0.0002

LYS 46 GLN 47 0.0073

GLN 47 ASP 48 -0.0001

ASP 48 ILE 49 -0.0325

ILE 49 LEU 50 -0.0001

LEU 50 LYS 51 -0.1120

LYS 51 GLU 52 -0.0002

GLU 52 HIS 53 0.0768

HIS 53 ASN 54 0.0003

ASN 54 ASP 55 -0.0895

ASP 55 PHE 56 0.0002

PHE 56 ARG 57 0.0207

ARG 57 GLN 58 -0.0002

GLN 58 LYS 59 -0.1048

LYS 59 ILE 60 0.0000

ILE 60 ALA 61 -0.0110

ALA 61 ARG 62 -0.0001

ARG 62 GLY 63 0.0005

GLY 63 LEU 64 0.0001

LEU 64 GLU 65 0.0227

GLU 65 THR 66 0.0002

THR 66 ARG 67 0.0227

ARG 67 GLY 68 0.0002

GLY 68 ASN 69 -0.0292

ASN 69 PRO 70 -0.0002

PRO 70 GLY 71 0.0028

GLY 71 PRO 72 0.0002

PRO 72 GLN 73 0.0061

GLN 73 PRO 74 0.0002

PRO 74 PRO 75 -0.0087

PRO 75 ALA 76 -0.0001

ALA 76 LYS 77 0.0102

LYS 77 ASN 78 -0.0002

ASN 78 MET 79 0.0984

MET 79 LYS 80 0.0000

LYS 80 ASN 81 0.1636

ASN 81 LEU 82 -0.0004

LEU 82 VAL 83 0.0066

VAL 83 TRP 84 0.0003

TRP 84 ASN 85 -0.1373

ASN 85 ASP 86 -0.0002

ASP 86 GLU 87 -0.1676

GLU 87 LEU 88 0.0001

LEU 88 ALA 89 0.0591

ALA 89 TYR 90 -0.0001

TYR 90 VAL 91 0.0093

VAL 91 ALA 92 0.0003

ALA 92 GLN 93 0.0696

GLN 93 VAL 94 0.0003

VAL 94 TRP 95 0.0128

TRP 95 ALA 96 -0.0000

ALA 96 ASN 97 -0.0308

ASN 97 GLN 98 0.0000

GLN 98 CYS 99 0.0067

CYS 99 GLN 100 0.0002

GLN 100 TYR 101 -0.0263

TYR 101 GLY 102 0.0003

GLY 102 HIS 103 -0.1298

HIS 103 ASP 104 0.0001

ASP 104 THR 105 -0.0729

THR 105 CYS 106 -0.0000

CYS 106 ARG 107 -0.0459

ARG 107 ASP 108 0.0004

ASP 108 VAL 109 -0.0888

VAL 109 ALA 110 -0.0001

ALA 110 LYS 111 0.0308

LYS 111 TYR 112 0.0002

TYR 112 GLN 113 -0.0053

GLN 113 VAL 114 0.0000

VAL 114 GLY 115 0.0624

GLY 115 GLN 116 0.0002

GLN 116 ASN 117 0.0492

ASN 117 VAL 118 0.0000

VAL 118 ALA 119 -0.1714

ALA 119 LEU 120 -0.0003

LEU 120 THR 121 -0.2182

THR 121 GLY 122 -0.0001

GLY 122 SER 123 -0.2570

SER 123 THR 124 0.0001

THR 124 ALA 125 0.0043

ALA 125 ALA 126 0.0000

ALA 126 LYS 127 0.0332

LYS 127 TYR 128 0.0002

TYR 128 ASP 129 0.0033

ASP 129 ASP 130 -0.0000

ASP 130 PRO 131 0.0286

PRO 131 VAL 132 0.0003

VAL 132 LYS 133 -0.0370

LYS 133 LEU 134 0.0002

LEU 134 VAL 135 -0.0503

VAL 135 LYS 136 0.0003

LYS 136 MET 137 0.0803

MET 137 TRP 138 0.0002

TRP 138 GLU 139 -0.0306

GLU 139 ASP 140 -0.0001

ASP 140 GLU 141 -0.0735

GLU 141 VAL 142 -0.0002

VAL 142 LYS 143 0.0286

LYS 143 ASP 144 0.0001

ASP 144 TYR 145 -0.0118

TYR 145 ASN 146 -0.0001

ASN 146 PRO 147 -0.0193

PRO 147 LYS 148 0.0003

LYS 148 LYS 149 0.0516

LYS 149 LYS 150 0.0001

LYS 150 PHE 151 -0.0178

PHE 151 SER 152 -0.0002

SER 152 GLY 153 -0.0415

GLY 153 ASN 154 0.0000

ASN 154 ASP 155 -0.0143

ASP 155 PHE 156 -0.0004

PHE 156 LEU 157 0.0593

LEU 157 LYS 158 0.0002

LYS 158 THR 159 0.0234

THR 159 GLY 160 0.0001

GLY 160 HIS 161 -0.1322

HIS 161 TYR 162 -0.0000

TYR 162 THR 163 -0.0927

THR 163 GLN 164 -0.0002

GLN 164 MET 165 0.0147

MET 165 VAL 166 -0.0001

VAL 166 TRP 167 0.0225

TRP 167 ALA 168 -0.0000

ALA 168 ASN 169 -0.0223

ASN 169 THR 170 -0.0000

THR 170 LYS 171 0.0937

LYS 171 GLU 172 -0.0001

GLU 172 VAL 173 0.0484

VAL 173 GLY 174 -0.0002

GLY 174 CYS 175 0.1330

CYS 175 GLY 176 0.0003

GLY 176 SER 177 0.1881

SER 177 ILE 178 -0.0001

ILE 178 LYS 179 0.0896

LYS 179 TYR 180 -0.0002

TYR 180 ILE 181 0.0926

ILE 181 GLN 182 -0.0004

GLN 182 GLU 183 0.0540

GLU 183 LYS 184 -0.0003

LYS 184 TRP 185 0.0239

TRP 185 HIS 186 0.0000

HIS 186 LYS 187 -0.0569

LYS 187 HIS 188 0.0002

HIS 188 TYR 189 -0.0973

TYR 189 LEU 190 0.0000

LEU 190 VAL 191 -0.0283

VAL 191 CYS 192 -0.0001

CYS 192 ASN 193 -0.0125

ASN 193 TYR 194 0.0001

TYR 194 GLY 195 -0.0570

GLY 195 PRO 196 -0.0003

PRO 196 SER 197 0.1083

SER 197 GLY 198 0.0002

GLY 198 ASN 199 0.1869

ASN 199 PHE 200 -0.0002

PHE 200 LYS 201 0.1126

LYS 201 ASN 202 0.0004

ASN 202 GLU 203 0.0480

GLU 203 GLU 204 -0.0004

GLU 204 LEU 205 -0.0122

LEU 205 TYR 206 -0.0002

TYR 206 GLN 207 -0.0619

GLN 207 THR 208 0.0002

THR 208 LYS 209 -0.0141

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 ***

CA strain for 240220091312161517

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *