CNRS Nantes University US2B US2B
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***  1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091312161517

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 -0.0000
GLU 2ALA 3 0.0299
ALA 3GLU 4 0.0000
GLU 4PHE 5 -0.0659
PHE 5ASN 6 0.0001
ASN 6ASN 7 0.0408
ASN 7TYR 8 -0.0002
TYR 8CYS 9 0.0546
CYS 9LYS 10 -0.0005
LYS 10ILE 11 -0.0022
ILE 11LYS 12 -0.0001
LYS 12CYS 13 -0.0728
CYS 13LEU 14 -0.0001
LEU 14LYS 15 0.0012
LYS 15GLY 16 -0.0002
GLY 16GLY 17 -0.0282
GLY 17VAL 18 0.0002
VAL 18HIS 19 0.0462
HIS 19THR 20 0.0001
THR 20ALA 21 -0.0899
ALA 21CYS 22 0.0001
CYS 22LYS 23 0.0317
LYS 23TYR 24 0.0001
TYR 24GLY 25 -0.0272
GLY 25SER 26 0.0003
SER 26LEU 27 -0.0176
LEU 27LYS 28 -0.0003
LYS 28PRO 29 0.0215
PRO 29ASN 30 0.0001
ASN 30CYS 31 0.1232
CYS 31GLY 32 -0.0001
GLY 32ASN 33 0.1241
ASN 33LYS 34 0.0001
LYS 34VAL 35 0.0443
VAL 35VAL 36 0.0002
VAL 36VAL 37 0.0013
VAL 37SER 38 0.0001
SER 38TYR 39 0.0327
TYR 39GLY 40 0.0001
GLY 40LEU 41 0.3410
LEU 41THR 42 0.0001
THR 42LYS 43 0.0878
LYS 43GLN 44 -0.0003
GLN 44GLU 45 0.0065
GLU 45LYS 46 -0.0002
LYS 46GLN 47 0.0606
GLN 47ASP 48 0.0003
ASP 48ILE 49 0.0217
ILE 49LEU 50 0.0002
LEU 50LYS 51 -0.0130
LYS 51GLU 52 -0.0001
GLU 52HIS 53 -0.0769
HIS 53ASN 54 0.0003
ASN 54ASP 55 0.0325
ASP 55PHE 56 -0.0002
PHE 56ARG 57 -0.0713
ARG 57GLN 58 0.0000
GLN 58LYS 59 0.1652
LYS 59ILE 60 -0.0000
ILE 60ALA 61 -0.0614
ALA 61ARG 62 0.0002
ARG 62GLY 63 0.0552
GLY 63LEU 64 -0.0002
LEU 64GLU 65 -0.1144
GLU 65THR 66 -0.0002
THR 66ARG 67 0.0055
ARG 67GLY 68 0.0002
GLY 68ASN 69 0.0590
ASN 69PRO 70 -0.0003
PRO 70GLY 71 0.1007
GLY 71PRO 72 -0.0002
PRO 72GLN 73 0.0023
GLN 73PRO 74 -0.0004
PRO 74PRO 75 0.0534
PRO 75ALA 76 -0.0003
ALA 76LYS 77 -0.0508
LYS 77ASN 78 0.0001
ASN 78MET 79 0.0011
MET 79LYS 80 -0.0003
LYS 80ASN 81 0.1157
ASN 81LEU 82 0.0003
LEU 82VAL 83 0.3200
VAL 83TRP 84 0.0000
TRP 84ASN 85 0.1864
ASN 85ASP 86 0.0001
ASP 86GLU 87 0.0056
GLU 87LEU 88 -0.0000
LEU 88ALA 89 -0.0345
ALA 89TYR 90 -0.0001
TYR 90VAL 91 -0.0339
VAL 91ALA 92 0.0003
ALA 92GLN 93 -0.0173
GLN 93VAL 94 0.0002
VAL 94TRP 95 -0.0920
TRP 95ALA 96 0.0001
ALA 96ASN 97 -0.0585
ASN 97GLN 98 0.0001
GLN 98CYS 99 0.0420
CYS 99GLN 100 0.0004
GLN 100TYR 101 -0.2881
TYR 101GLY 102 -0.0004
GLY 102HIS 103 0.1296
HIS 103ASP 104 0.0000
ASP 104THR 105 0.1163
THR 105CYS 106 0.0002
CYS 106ARG 107 0.0365
ARG 107ASP 108 0.0002
ASP 108VAL 109 0.0386
VAL 109ALA 110 -0.0001
ALA 110LYS 111 0.1113
LYS 111TYR 112 0.0000
TYR 112GLN 113 -0.0830
GLN 113VAL 114 -0.0003
VAL 114GLY 115 0.0018
GLY 115GLN 116 -0.0001
GLN 116ASN 117 0.0010
ASN 117VAL 118 -0.0003
VAL 118ALA 119 0.0544
ALA 119LEU 120 0.0001
LEU 120THR 121 0.1216
THR 121GLY 122 -0.0001
GLY 122SER 123 0.0295
SER 123THR 124 -0.0000
THR 124ALA 125 0.0054
ALA 125ALA 126 -0.0003
ALA 126LYS 127 -0.0016
LYS 127TYR 128 0.0001
TYR 128ASP 129 -0.0468
ASP 129ASP 130 0.0002
ASP 130PRO 131 -0.0037
PRO 131VAL 132 0.0002
VAL 132LYS 133 -0.1372
LYS 133LEU 134 0.0004
LEU 134VAL 135 -0.1711
VAL 135LYS 136 -0.0000
LYS 136MET 137 -0.0502
MET 137TRP 138 -0.0000
TRP 138GLU 139 -0.2612
GLU 139ASP 140 -0.0002
ASP 140GLU 141 0.1293
GLU 141VAL 142 0.0002
VAL 142LYS 143 0.0028
LYS 143ASP 144 0.0003
ASP 144TYR 145 0.0571
TYR 145ASN 146 0.0002
ASN 146PRO 147 0.0569
PRO 147LYS 148 -0.0002
LYS 148LYS 149 -0.0047
LYS 149LYS 150 0.0001
LYS 150PHE 151 -0.0658
PHE 151SER 152 0.0002
SER 152GLY 153 0.0092
GLY 153ASN 154 -0.0002
ASN 154ASP 155 0.0608
ASP 155PHE 156 0.0001
PHE 156LEU 157 -0.0029
LEU 157LYS 158 0.0000
LYS 158THR 159 0.0109
THR 159GLY 160 -0.0002
GLY 160HIS 161 -0.0548
HIS 161TYR 162 0.0000
TYR 162THR 163 0.0099
THR 163GLN 164 0.0002
GLN 164MET 165 -0.0056
MET 165VAL 166 -0.0003
VAL 166TRP 167 -0.0255
TRP 167ALA 168 0.0004
ALA 168ASN 169 0.0443
ASN 169THR 170 -0.0001
THR 170LYS 171 0.0307
LYS 171GLU 172 -0.0000
GLU 172VAL 173 -0.0168
VAL 173GLY 174 0.0000
GLY 174CYS 175 0.1008
CYS 175GLY 176 -0.0001
GLY 176SER 177 0.0697
SER 177ILE 178 -0.0001
ILE 178LYS 179 0.0162
LYS 179TYR 180 0.0003
TYR 180ILE 181 0.0543
ILE 181GLN 182 0.0001
GLN 182GLU 183 0.1143
GLU 183LYS 184 -0.0002
LYS 184TRP 185 -0.0441
TRP 185HIS 186 -0.0004
HIS 186LYS 187 0.0043
LYS 187HIS 188 0.0001
HIS 188TYR 189 0.0951
TYR 189LEU 190 0.0000
LEU 190VAL 191 0.0576
VAL 191CYS 192 -0.0002
CYS 192ASN 193 0.0067
ASN 193TYR 194 -0.0001
TYR 194GLY 195 0.0423
GLY 195PRO 196 -0.0000
PRO 196SER 197 -0.0664
SER 197GLY 198 0.0001
GLY 198ASN 199 -0.0312
ASN 199PHE 200 -0.0002
PHE 200LYS 201 -0.1244
LYS 201ASN 202 0.0003
ASN 202GLU 203 0.0496
GLU 203GLU 204 -0.0001
GLU 204LEU 205 -0.0004
LEU 205TYR 206 -0.0000
TYR 206GLN 207 -0.0137
GLN 207THR 208 0.0004
THR 208LYS 209 -0.0158

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.