CNRS Nantes University US2B US2B
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***  1QNX_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091312161517

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 0.0003
GLU 2ALA 3 -0.0086
ALA 3GLU 4 -0.0002
GLU 4PHE 5 0.0330
PHE 5ASN 6 0.0001
ASN 6ASN 7 0.0458
ASN 7TYR 8 0.0003
TYR 8CYS 9 -0.0559
CYS 9LYS 10 -0.0001
LYS 10ILE 11 0.1673
ILE 11LYS 12 0.0004
LYS 12CYS 13 0.1415
CYS 13LEU 14 0.0001
LEU 14LYS 15 0.0546
LYS 15GLY 16 0.0001
GLY 16GLY 17 0.0268
GLY 17VAL 18 0.0001
VAL 18HIS 19 -0.0463
HIS 19THR 20 0.0003
THR 20ALA 21 0.0281
ALA 21CYS 22 -0.0000
CYS 22LYS 23 0.0404
LYS 23TYR 24 -0.0001
TYR 24GLY 25 0.0461
GLY 25SER 26 -0.0002
SER 26LEU 27 -0.0686
LEU 27LYS 28 -0.0000
LYS 28PRO 29 0.0544
PRO 29ASN 30 -0.0001
ASN 30CYS 31 0.1005
CYS 31GLY 32 -0.0002
GLY 32ASN 33 0.1086
ASN 33LYS 34 0.0002
LYS 34VAL 35 0.0002
VAL 35VAL 36 -0.0002
VAL 36VAL 37 -0.0142
VAL 37SER 38 -0.0003
SER 38TYR 39 0.0296
TYR 39GLY 40 0.0003
GLY 40LEU 41 -0.2787
LEU 41THR 42 0.0000
THR 42LYS 43 0.0374
LYS 43GLN 44 -0.0003
GLN 44GLU 45 0.0826
GLU 45LYS 46 0.0001
LYS 46GLN 47 -0.0546
GLN 47ASP 48 0.0004
ASP 48ILE 49 0.0582
ILE 49LEU 50 -0.0002
LEU 50LYS 51 -0.0019
LYS 51GLU 52 0.0001
GLU 52HIS 53 -0.0552
HIS 53ASN 54 0.0001
ASN 54ASP 55 0.1109
ASP 55PHE 56 0.0001
PHE 56ARG 57 -0.0961
ARG 57GLN 58 0.0001
GLN 58LYS 59 0.2189
LYS 59ILE 60 0.0002
ILE 60ALA 61 0.0090
ALA 61ARG 62 -0.0000
ARG 62GLY 63 0.0081
GLY 63LEU 64 0.0002
LEU 64GLU 65 -0.0177
GLU 65THR 66 -0.0004
THR 66ARG 67 0.0095
ARG 67GLY 68 -0.0001
GLY 68ASN 69 -0.0038
ASN 69PRO 70 0.0001
PRO 70GLY 71 0.0410
GLY 71PRO 72 0.0000
PRO 72GLN 73 0.0576
GLN 73PRO 74 -0.0002
PRO 74PRO 75 -0.0388
PRO 75ALA 76 -0.0001
ALA 76LYS 77 -0.0819
LYS 77ASN 78 0.0003
ASN 78MET 79 -0.1739
MET 79LYS 80 0.0001
LYS 80ASN 81 -0.1738
ASN 81LEU 82 -0.0000
LEU 82VAL 83 -0.0884
VAL 83TRP 84 0.0001
TRP 84ASN 85 -0.0619
ASN 85ASP 86 0.0002
ASP 86GLU 87 -0.1731
GLU 87LEU 88 -0.0001
LEU 88ALA 89 -0.0095
ALA 89TYR 90 -0.0001
TYR 90VAL 91 -0.0105
VAL 91ALA 92 -0.0001
ALA 92GLN 93 0.1081
GLN 93VAL 94 -0.0002
VAL 94TRP 95 0.0056
TRP 95ALA 96 0.0002
ALA 96ASN 97 0.0223
ASN 97GLN 98 0.0001
GLN 98CYS 99 0.0623
CYS 99GLN 100 0.0002
GLN 100TYR 101 -0.0003
TYR 101GLY 102 -0.0001
GLY 102HIS 103 0.0718
HIS 103ASP 104 0.0000
ASP 104THR 105 0.0306
THR 105CYS 106 0.0001
CYS 106ARG 107 -0.0586
ARG 107ASP 108 -0.0003
ASP 108VAL 109 -0.1916
VAL 109ALA 110 -0.0002
ALA 110LYS 111 0.1245
LYS 111TYR 112 0.0001
TYR 112GLN 113 -0.0256
GLN 113VAL 114 0.0002
VAL 114GLY 115 -0.1008
GLY 115GLN 116 0.0002
GLN 116ASN 117 -0.0585
ASN 117VAL 118 -0.0002
VAL 118ALA 119 -0.0042
ALA 119LEU 120 -0.0001
LEU 120THR 121 0.0322
THR 121GLY 122 -0.0000
GLY 122SER 123 -0.0492
SER 123THR 124 0.0000
THR 124ALA 125 -0.0053
ALA 125ALA 126 -0.0001
ALA 126LYS 127 -0.0843
LYS 127TYR 128 -0.0002
TYR 128ASP 129 -0.2883
ASP 129ASP 130 0.0004
ASP 130PRO 131 0.0009
PRO 131VAL 132 -0.0001
VAL 132LYS 133 -0.0199
LYS 133LEU 134 -0.0002
LEU 134VAL 135 -0.2507
VAL 135LYS 136 -0.0000
LYS 136MET 137 0.0420
MET 137TRP 138 0.0000
TRP 138GLU 139 -0.1208
GLU 139ASP 140 0.0001
ASP 140GLU 141 0.0347
GLU 141VAL 142 0.0004
VAL 142LYS 143 0.0329
LYS 143ASP 144 -0.0001
ASP 144TYR 145 -0.0043
TYR 145ASN 146 0.0002
ASN 146PRO 147 -0.0411
PRO 147LYS 148 -0.0002
LYS 148LYS 149 0.0116
LYS 149LYS 150 -0.0002
LYS 150PHE 151 0.1074
PHE 151SER 152 0.0001
SER 152GLY 153 0.0267
GLY 153ASN 154 0.0000
ASN 154ASP 155 -0.0216
ASP 155PHE 156 0.0000
PHE 156LEU 157 -0.1012
LEU 157LYS 158 -0.0003
LYS 158THR 159 0.0008
THR 159GLY 160 -0.0002
GLY 160HIS 161 0.1059
HIS 161TYR 162 0.0000
TYR 162THR 163 0.0630
THR 163GLN 164 0.0002
GLN 164MET 165 0.0390
MET 165VAL 166 -0.0001
VAL 166TRP 167 -0.0238
TRP 167ALA 168 -0.0000
ALA 168ASN 169 0.0669
ASN 169THR 170 -0.0003
THR 170LYS 171 -0.1246
LYS 171GLU 172 0.0002
GLU 172VAL 173 -0.0544
VAL 173GLY 174 -0.0001
GLY 174CYS 175 0.0448
CYS 175GLY 176 -0.0002
GLY 176SER 177 0.0706
SER 177ILE 178 0.0001
ILE 178LYS 179 0.0610
LYS 179TYR 180 -0.0003
TYR 180ILE 181 0.0276
ILE 181GLN 182 0.0000
GLN 182GLU 183 0.1000
GLU 183LYS 184 -0.0000
LYS 184TRP 185 -0.0633
TRP 185HIS 186 -0.0002
HIS 186LYS 187 -0.0009
LYS 187HIS 188 -0.0000
HIS 188TYR 189 0.1183
TYR 189LEU 190 0.0002
LEU 190VAL 191 0.0349
VAL 191CYS 192 -0.0000
CYS 192ASN 193 -0.0209
ASN 193TYR 194 -0.0000
TYR 194GLY 195 -0.0089
GLY 195PRO 196 0.0004
PRO 196SER 197 -0.1012
SER 197GLY 198 0.0001
GLY 198ASN 199 -0.0143
ASN 199PHE 200 -0.0002
PHE 200LYS 201 0.2004
LYS 201ASN 202 -0.0002
ASN 202GLU 203 -0.2106
GLU 203GLU 204 -0.0000
GLU 204LEU 205 -0.0845
LEU 205TYR 206 -0.0003
TYR 206GLN 207 0.1068
GLN 207THR 208 -0.0003
THR 208LYS 209 0.0640

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.