CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  2VIU_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220091834168138

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1THR 2 0.0002
THR 2ALA 3 -0.0628
ALA 3THR 4 -0.0003
THR 4LEU 5 -0.0326
LEU 5CYS 6 -0.0000
CYS 6LEU 7 0.0292
LEU 7GLY 8 -0.0002
GLY 8HIS 9 0.0271
HIS 9HIS 10 -0.0000
HIS 10ALA 11 0.0116
ALA 11VAL 12 -0.0001
VAL 12PRO 13 0.0119
PRO 13ASN 14 0.0001
ASN 14GLY 15 -0.0058
GLY 15THR 16 -0.0001
THR 16LEU 17 -0.0034
LEU 17VAL 18 0.0004
VAL 18LYS 19 0.0031
LYS 19THR 20 0.0000
THR 20ILE 21 0.0000
ILE 21THR 22 0.0000
THR 22ASP 23 0.0015
ASP 23ASP 24 -0.0001
ASP 24GLN 25 -0.0119
GLN 25ILE 26 0.0002
ILE 26GLU 27 -0.0317
GLU 27VAL 28 0.0004
VAL 28THR 29 0.0159
THR 29ASN 30 0.0003
ASN 30ALA 31 0.0314
ALA 31THR 32 0.0001
THR 32GLU 33 0.0909
GLU 33LEU 34 -0.0003
LEU 34VAL 35 0.0368
VAL 35GLN 36 0.0002
GLN 36SER 37 -0.0096
SER 37SER 38 -0.0002
SER 38SER 39 0.0017
SER 39THR 40 -0.0000
THR 40GLY 41 0.0077
GLY 41LYS 42 0.0001
LYS 42ILE 43 0.0022
ILE 43CYS 44 -0.0001
CYS 44ASN 45 -0.0092
ASN 45ASN 46 0.0005
ASN 46PRO 47 0.0095
PRO 47HIS 48 -0.0001
HIS 48ARG 49 -0.0545
ARG 49ILE 50 0.0003
ILE 50LEU 51 -0.0341
LEU 51ASP 52 -0.0002
ASP 52GLY 53 -0.0096
GLY 53ILE 54 -0.0001
ILE 54ASP 55 -0.0017
ASP 55CYS 56 -0.0003
CYS 56THR 57 -0.0056
THR 57LEU 58 0.0001
LEU 58ILE 59 0.0141
ILE 59ASP 60 0.0000
ASP 60ALA 61 0.0004
ALA 61LEU 62 0.0002
LEU 62LEU 63 -0.0004
LEU 63GLY 64 0.0001
GLY 64ASP 65 0.0031
ASP 65PRO 66 -0.0001
PRO 66HIS 67 -0.0090
HIS 67CYS 68 -0.0000
CYS 68ASP 69 0.0091
ASP 69VAL 70 -0.0000
VAL 70PHE 71 -0.0010
PHE 71GLN 72 0.0002
GLN 72ASN 73 -0.0005
ASN 73GLU 74 -0.0006
GLU 74THR 75 -0.0121
THR 75TRP 76 -0.0001
TRP 76ASP 77 -0.0196
ASP 77LEU 78 0.0003
LEU 78PHE 79 0.0093
PHE 79VAL 80 0.0001
VAL 80GLU 81 0.0039
GLU 81ARG 82 0.0002
ARG 82SER 83 -0.0105
SER 83LYS 84 0.0004
LYS 84ALA 85 0.0071
ALA 85PHE 86 0.0002
PHE 86SER 87 0.0268
SER 87ASN 88 -0.0003
ASN 88CYS 89 0.0052
CYS 89TYR 90 -0.0001
TYR 90PRO 91 -0.0016
PRO 91TYR 92 0.0000
TYR 92ASP 93 -0.0078
ASP 93VAL 94 -0.0002
VAL 94PRO 95 -0.0088
PRO 95ASP 96 -0.0000
ASP 96TYR 97 0.0121
TYR 97ALA 98 -0.0000
ALA 98SER 99 -0.0094
SER 99LEU 100 -0.0002
LEU 100ARG 101 0.0357
ARG 101SER 102 -0.0000
SER 102LEU 103 0.0021
LEU 103VAL 104 0.0000
VAL 104ALA 105 0.0285
ALA 105SER 106 -0.0001
SER 106SER 107 0.0029
SER 107GLY 108 -0.0001
GLY 108THR 109 -0.0037
THR 109LEU 110 -0.0000
LEU 110GLU 111 0.0001
GLU 111PHE 112 0.0004
PHE 112ILE 113 -0.0090
ILE 113THR 114 0.0003
THR 114GLU 115 -0.0068
GLU 115GLY 116 -0.0001
GLY 116PHE 117 -0.0059
PHE 117THR 118 -0.0000
THR 118TRP 119 -0.0041
TRP 119THR 120 -0.0003
THR 120GLY 121 -0.0035
GLY 121VAL 122 0.0000
VAL 122ILE 123 0.0001
ILE 123GLN 124 -0.0000
GLN 124ASN 125 0.0031
ASN 125GLY 126 0.0001
GLY 126GLY 127 0.0023
GLY 127SER 128 0.0002
SER 128ASN 129 0.0025
ASN 129ALA 130 0.0000
ALA 130CYS 131 -0.0036
CYS 131LYS 132 0.0000
LYS 132ARG 133 0.0003
ARG 133GLY 134 0.0003
GLY 134PRO 135 0.0010
PRO 135GLY 136 -0.0001
GLY 136SER 137 0.0020
SER 137GLY 138 0.0000
GLY 138PHE 139 0.0042
PHE 139PHE 140 0.0000
PHE 140SER 141 -0.0073
SER 141ARG 142 0.0001
ARG 142LEU 143 -0.0123
LEU 143ASN 144 0.0004
ASN 144TRP 145 -0.0063
TRP 145LEU 146 0.0000
LEU 146THR 147 -0.0026
THR 147LYS 148 0.0003
LYS 148SER 149 0.0012
SER 149GLY 150 0.0000
GLY 150SER 151 -0.0012
SER 151THR 152 0.0005
THR 152TYR 153 0.0020
TYR 153PRO 154 0.0000
PRO 154VAL 155 0.0023
VAL 155LEU 156 -0.0003
LEU 156ASN 157 0.0004
ASN 157VAL 158 -0.0001
VAL 158THR 159 -0.0001
THR 159MET 160 -0.0004
MET 160PRO 161 -0.0002
PRO 161ASN 162 -0.0002
ASN 162ASN 163 0.0001
ASN 163ASP 164 -0.0003
ASP 164ASN 165 0.0012
ASN 165PHE 166 0.0002
PHE 166ASP 167 -0.0017
ASP 167LYS 168 -0.0002
LYS 168LEU 169 -0.0018
LEU 169TYR 170 0.0004
TYR 170ILE 171 -0.0010
ILE 171TRP 172 -0.0000
TRP 172GLY 173 -0.0023
GLY 173ILE 174 -0.0002
ILE 174HIS 175 -0.0005
HIS 175HIS 176 0.0003
HIS 176PRO 177 0.0049
PRO 177SER 178 0.0000
SER 178THR 179 0.0011
THR 179ASN 180 0.0001
ASN 180GLN 181 0.0015
GLN 181GLU 182 -0.0001
GLU 182GLN 183 -0.0006
GLN 183THR 184 0.0001
THR 184SER 185 0.0004
SER 185LEU 186 -0.0001
LEU 186TYR 187 0.0000
TYR 187VAL 188 -0.0000
VAL 188GLN 189 0.0003
GLN 189ALA 190 0.0001
ALA 190SER 191 0.0026
SER 191GLY 192 0.0003
GLY 192ARG 193 -0.0002
ARG 193VAL 194 0.0002
VAL 194THR 195 -0.0028
THR 195VAL 196 -0.0001
VAL 196SER 197 -0.0017
SER 197THR 198 0.0002
THR 198ARG 199 0.0020
ARG 199ARG 200 0.0000
ARG 200SER 201 -0.0019
SER 201GLN 202 -0.0000
GLN 202GLN 203 -0.0027
GLN 203THR 204 -0.0004
THR 204ILE 205 -0.0042
ILE 205ILE 206 -0.0000
ILE 206PRO 207 -0.0050
PRO 207ASN 208 0.0003
ASN 208ILE 209 -0.0003
ILE 209GLY 210 0.0004
GLY 210SER 211 -0.0032
SER 211ARG 212 -0.0001
ARG 212PRO 213 -0.0009
PRO 213TRP 214 -0.0002
TRP 214VAL 215 0.0041
VAL 215ARG 216 0.0004
ARG 216GLY 217 0.0007
GLY 217LEU 218 -0.0001
LEU 218SER 219 -0.0036
SER 219SER 220 0.0001
SER 220ARG 221 0.0035
ARG 221ILE 222 0.0004
ILE 222SER 223 -0.0005
SER 223ILE 224 0.0001
ILE 224TYR 225 -0.0048
TYR 225TRP 226 -0.0001
TRP 226THR 227 -0.0003
THR 227ILE 228 -0.0001
ILE 228VAL 229 0.0028
VAL 229LYS 230 -0.0000
LYS 230PRO 231 0.0001
PRO 231GLY 232 0.0003
GLY 232ASP 233 -0.0009
ASP 233VAL 234 -0.0000
VAL 234LEU 235 -0.0005
LEU 235VAL 236 0.0000
VAL 236ILE 237 -0.0021
ILE 237ASN 238 -0.0001
ASN 238SER 239 -0.0022
SER 239ASN 240 0.0001
ASN 240GLY 241 0.0013
GLY 241ASN 242 -0.0003
ASN 242LEU 243 -0.0036
LEU 243ILE 244 0.0002
ILE 244ALA 245 -0.0029
ALA 245PRO 246 0.0001
PRO 246ARG 247 -0.0024
ARG 247GLY 248 -0.0001
GLY 248TYR 249 0.0004
TYR 249PHE 250 0.0000
PHE 250LYS 251 -0.0000
LYS 251MET 252 -0.0003
MET 252ARG 253 -0.0011
ARG 253THR 254 0.0000
THR 254GLY 255 0.0047
GLY 255LYS 256 -0.0001
LYS 256SER 257 -0.0101
SER 257SER 258 -0.0004
SER 258ILE 259 -0.0117
ILE 259MET 260 -0.0002
MET 260ARG 261 -0.0206
ARG 261SER 262 0.0002
SER 262ASP 263 0.0019
ASP 263ALA 264 0.0003
ALA 264PRO 265 0.0098
PRO 265ILE 266 -0.0001
ILE 266ASP 267 -0.0070
ASP 267THR 268 0.0001
THR 268CYS 269 -0.0012
CYS 269ILE 270 -0.0001
ILE 270SER 271 0.0020
SER 271GLU 272 -0.0001
GLU 272CYS 273 -0.0017
CYS 273ILE 274 0.0003
ILE 274THR 275 -0.0085
THR 275PRO 276 -0.0003
PRO 276ASN 277 0.0138
ASN 277GLY 278 0.0004
GLY 278SER 279 0.0010
SER 279ILE 280 0.0003
ILE 280PRO 281 0.0097
PRO 281ASN 282 -0.0002
ASN 282ASP 283 0.0036
ASP 283LYS 284 -0.0002
LYS 284PRO 285 -0.0018
PRO 285PHE 286 0.0001
PHE 286GLN 287 0.0018
GLN 287ASN 288 0.0002
ASN 288VAL 289 -0.0049
VAL 289ASN 290 0.0001
ASN 290LYS 291 -0.0040
LYS 291ILE 292 0.0001
ILE 292THR 293 -0.0040
THR 293TYR 294 -0.0001
TYR 294GLY 295 0.0080
GLY 295ALA 296 -0.0001
ALA 296CYS 297 -0.0051
CYS 297PRO 298 0.0002
PRO 298LYS 299 -0.0015
LYS 299TYR 300 0.0001
TYR 300VAL 301 -0.0001
VAL 301LYS 302 -0.0003
LYS 302GLN 303 -0.0055
GLN 303ASN 304 0.0001
ASN 304THR 305 -0.0177
THR 305LEU 306 0.0002
LEU 306LYS 307 -0.0710
LYS 307LEU 308 0.0002
LEU 308ALA 309 -0.0137
ALA 309THR 310 0.0000
THR 310GLY 311 0.0249
GLY 311MET 312 0.0000
MET 312ARG 313 0.0267
ARG 313ASN 314 0.0000
ASN 314VAL 315 -0.0720
VAL 315PRO 316 -0.0001
PRO 316GLU 317 -0.1402
GLU 317LYS 318 -0.0000
LYS 318GLN 319 -0.0097
GLN 319THR 320 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.