CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 0.0000
HIS 2MET 3 -0.0101
MET 3GLY 4 -0.0000
GLY 4SER 5 0.0324
SER 5SER 6 -0.0001
SER 6VAL 7 0.0121
VAL 7LEU 8 -0.0001
LEU 8GLU 9 -0.0319
GLU 9GLU 10 -0.0002
GLU 10LEU 11 0.0099
LEU 11VAL 12 -0.0003
VAL 12GLN 13 -0.0122
GLN 13LEU 14 0.0001
LEU 14VAL 15 -0.0085
VAL 15LYS 16 0.0002
LYS 16ASP 17 -0.0011
ASP 17LYS 18 -0.0001
LYS 18ASN 19 -0.0178
ASN 19ILE 20 0.0004
ILE 20ASP 21 -0.0307
ASP 21ILE 22 -0.0001
ILE 22SER 23 -0.0291
SER 23ILE 24 -0.0002
ILE 24LYS 25 -0.0095
LYS 25TYR 26 0.0001
TYR 26ASP 27 0.0011
ASP 27PRO 28 0.0001
PRO 28ARG 29 -0.0135
ARG 29LYS 30 -0.0001
LYS 30ASP 31 -0.0327
ASP 31SER 32 -0.0005
SER 32GLU 33 -0.0157
GLU 33VAL 34 -0.0001
VAL 34PHE 35 0.0070
PHE 35ALA 36 0.0002
ALA 36ASN 37 -0.0095
ASN 37ARG 38 -0.0001
ARG 38VAL 39 -0.0191
VAL 39ILE 40 0.0001
ILE 40THR 41 -0.0136
THR 41ASP 42 0.0003
ASP 42ASP 43 0.0037
ASP 43ILE 44 -0.0002
ILE 44GLU 45 -0.0008
GLU 45LEU 46 -0.0001
LEU 46LEU 47 0.0031
LEU 47LYS 48 -0.0005
LYS 48LYS 49 -0.0206
LYS 49ILE 50 -0.0003
ILE 50LEU 51 0.0096
LEU 51ALA 52 -0.0001
ALA 52TYR 53 -0.0336
TYR 53PHE 54 0.0002
PHE 54LEU 55 -0.0326
LEU 55PRO 56 0.0001
PRO 56GLU 57 -0.0829
GLU 57ASP 58 0.0002
ASP 58ALA 59 0.0268
ALA 59ILE 60 -0.0001
ILE 60LEU 61 0.0353
LEU 61LYS 62 0.0000
LYS 62GLY 63 0.0101
GLY 63GLY 64 0.0002
GLY 64HIS 65 0.0200
HIS 65TYR 66 0.0001
TYR 66ASP 67 -0.0042
ASP 67ASN 68 -0.0004
ASN 68GLN 69 0.0308
GLN 69LEU 70 0.0000
LEU 70GLN 71 -0.0126
GLN 71ASN 72 -0.0003
ASN 72GLY 73 0.0148
GLY 73ILE 74 0.0004
ILE 74LYS 75 0.0299
LYS 75ARG 76 -0.0000
ARG 76VAL 77 0.0132
VAL 77LYS 78 -0.0001
LYS 78GLU 79 0.0098
GLU 79PHE 80 0.0000
PHE 80LEU 81 0.0508
LEU 81GLU 82 -0.0003
GLU 82SER 83 0.0053
SER 83SER 84 0.0002
SER 84PRO 85 0.0171
PRO 85ASN 86 0.0000
ASN 86THR 87 0.0394
THR 87GLN 88 0.0002
GLN 88TRP 89 -0.0001
TRP 89GLU 90 -0.0001
GLU 90LEU 91 -0.0039
LEU 91ARG 92 0.0003
ARG 92ALA 93 0.0072
ALA 93PHE 94 -0.0001
PHE 94MET 95 -0.0119
MET 95ALA 96 -0.0002
ALA 96VAL 97 0.0150
VAL 97MET 98 -0.0000
MET 98HIS 99 -0.0409
HIS 99PHE 100 0.0002
PHE 100SER 101 0.0389
SER 101LEU 102 -0.0001
LEU 102THR 103 -0.0441
THR 103ALA 104 0.0001
ALA 104ASP 105 -0.0285
ASP 105ARG 106 -0.0002
ARG 106ILE 107 -0.0337
ILE 107ASP 108 -0.0001
ASP 108ASP 109 0.0277
ASP 109ASP 110 -0.0001
ASP 110ILE 111 -0.0024
ILE 111LEU 112 0.0002
LEU 112LYS 113 0.0106
LYS 113VAL 114 -0.0004
VAL 114ILE 115 -0.0251
ILE 115VAL 116 -0.0002
VAL 116ASP 117 -0.0379
ASP 117SER 118 -0.0001
SER 118MET 119 0.0124
MET 119ASN 120 0.0002
ASN 120HIS 121 -0.0210
HIS 121HIS 122 0.0000
HIS 122GLY 123 -0.0261
GLY 123ASP 124 -0.0002
ASP 124ALA 125 -0.0148
ALA 125ARG 126 -0.0002
ARG 126SER 127 0.0061
SER 127LYS 128 0.0001
LYS 128LEU 129 0.0394
LEU 129ARG 130 -0.0001
ARG 130GLU 131 -0.0950
GLU 131GLU 132 0.0004
GLU 132LEU 133 0.0628
LEU 133ALA 134 0.0002
ALA 134GLU 135 -0.0979
GLU 135LEU 136 -0.0005
LEU 136THR 137 0.0329
THR 137ALA 138 -0.0000
ALA 138GLU 139 -0.0135
GLU 139LEU 140 0.0003
LEU 140LYS 141 -0.0035
LYS 141ILE 142 -0.0002
ILE 142TYR 143 -0.0408
TYR 143SER 144 0.0001
SER 144VAL 145 0.0704
VAL 145ILE 146 0.0001
ILE 146GLN 147 -0.0093
GLN 147ALA 148 0.0002
ALA 148GLU 149 0.0516
GLU 149ILE 150 -0.0000
ILE 150ASN 151 0.0091
ASN 151LYS 152 0.0000
LYS 152HIS 153 0.0147
HIS 153LEU 154 -0.0002
LEU 154SER 155 0.0163
SER 155SER 156 0.0004
SER 156SER 157 0.0029
SER 157GLY 158 -0.0002
GLY 158THR 159 0.0296
THR 159ILE 160 -0.0001
ILE 160ASN 161 0.0560
ASN 161ILE 162 -0.0002
ILE 162HIS 163 -0.0181
HIS 163ASP 164 -0.0004
ASP 164LYS 165 0.0451
LYS 165SER 166 -0.0003
SER 166ILE 167 -0.0107
ILE 167ASN 168 -0.0003
ASN 168LEU 169 0.1932
LEU 169MET 170 -0.0000
MET 170ASP 171 0.0033
ASP 171LYS 172 -0.0002
LYS 172ASN 173 -0.0143
ASN 173LEU 174 0.0001
LEU 174TYR 175 0.0214
TYR 175GLY 176 -0.0002
GLY 176TYR 177 -0.0421
TYR 177THR 178 0.0002
THR 178ASP 179 -0.0151
ASP 179GLU 180 -0.0000
GLU 180GLU 181 -0.0220
GLU 181ILE 182 -0.0002
ILE 182PHE 183 0.0298
PHE 183LYS 184 -0.0003
LYS 184ALA 185 -0.0210
ALA 185SER 186 0.0002
SER 186ALA 187 0.0218
ALA 187GLU 188 0.0002
GLU 188TYR 189 -0.0146
TYR 189LYS 190 -0.0000
LYS 190ILE 191 0.0466
ILE 191LEU 192 -0.0001
LEU 192GLU 193 -0.0871
GLU 193LYS 194 0.0002
LYS 194MET 195 0.0038
MET 195PRO 196 0.0002
PRO 196GLN 197 -0.3312
GLN 197THR 198 -0.0004
THR 198THR 199 -0.4696
THR 199ILE 200 -0.0000
ILE 200GLN 201 -0.0733
GLN 201VAL 202 0.0000
VAL 202ASP 203 0.0643
ASP 203GLY 204 -0.0005
GLY 204SER 205 0.0035
SER 205GLU 206 -0.0001
GLU 206LYS 207 0.1754
LYS 207LYS 208 0.0002
LYS 208ILE 209 0.1073
ILE 209VAL 210 -0.0003
VAL 210SER 211 -0.0076
SER 211ILE 212 -0.0002
ILE 212LYS 213 -0.0341
LYS 213ASP 214 -0.0001
ASP 214PHE 215 -0.1050
PHE 215LEU 216 0.0003
LEU 216GLY 217 0.0016
GLY 217SER 218 0.0000
SER 218GLU 219 -0.0585
GLU 219ASN 220 0.0001
ASN 220LYS 221 -0.0679
LYS 221ARG 222 -0.0001
ARG 222THR 223 0.0020
THR 223GLY 224 -0.0001
GLY 224ALA 225 -0.0103
ALA 225LEU 226 0.0001
LEU 226GLY 227 -0.0368
GLY 227ASN 228 -0.0001
ASN 228LEU 229 -0.0134
LEU 229LYS 230 0.0003
LYS 230ASN 231 -0.0894
ASN 231SER 232 -0.0004
SER 232TYR 233 -0.0122
TYR 233SER 234 -0.0002
SER 234TYR 235 0.0143
TYR 235ASN 236 0.0002
ASN 236LEU 237 0.0061
LEU 237ASN 238 -0.0002
ASN 238ASP 239 0.0045
ASP 239LEU 240 -0.0000
LEU 240VAL 241 -0.0140
VAL 241SER 242 0.0003
SER 242GLN 243 0.0144
GLN 243LYS 244 0.0002
LYS 244THR 245 -0.0094
THR 245THR 246 0.0002
THR 246GLN 247 0.0248
GLN 247LEU 248 0.0002
LEU 248SER 249 -0.0207
SER 249ASP 250 -0.0000
ASP 250ILE 251 -0.0206
ILE 251THR 252 -0.0000
THR 252SER 253 -0.0237
SER 253ARG 254 -0.0000
ARG 254PHE 255 -0.0076
PHE 255ASN 256 -0.0002
ASN 256SER 257 -0.0334
SER 257ALA 258 -0.0001
ALA 258ILE 259 0.0115
ILE 259GLU 260 -0.0003
GLU 260ALA 261 -0.0288
ALA 261LEU 262 0.0005
LEU 262ASN 263 0.0301
ASN 263ARG 264 0.0001
ARG 264PHE 265 -0.0010
PHE 265ILE 266 -0.0001
ILE 266GLN 267 0.0041
GLN 267LYS 268 0.0003
LYS 268TYR 269 0.0223
TYR 269ASP 270 -0.0001
ASP 270SER 271 -0.0219
SER 271VAL 272 0.0001
VAL 272MET 273 0.0450
MET 273GLN 274 0.0002
GLN 274ARG 275 0.0166
ARG 275LEU 276 0.0002

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.