CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0003
HIS 2MET 3 -0.0602
MET 3GLY 4 0.0004
GLY 4SER 5 0.0715
SER 5SER 6 0.0001
SER 6VAL 7 -0.0195
VAL 7LEU 8 0.0001
LEU 8GLU 9 -0.0717
GLU 9GLU 10 -0.0004
GLU 10LEU 11 0.0224
LEU 11VAL 12 -0.0000
VAL 12GLN 13 -0.0225
GLN 13LEU 14 0.0001
LEU 14VAL 15 -0.0142
VAL 15LYS 16 0.0004
LYS 16ASP 17 -0.0127
ASP 17LYS 18 0.0002
LYS 18ASN 19 -0.0352
ASN 19ILE 20 -0.0001
ILE 20ASP 21 -0.0281
ASP 21ILE 22 -0.0002
ILE 22SER 23 -0.0319
SER 23ILE 24 -0.0002
ILE 24LYS 25 -0.0099
LYS 25TYR 26 0.0004
TYR 26ASP 27 0.0160
ASP 27PRO 28 0.0003
PRO 28ARG 29 -0.0021
ARG 29LYS 30 -0.0004
LYS 30ASP 31 -0.0140
ASP 31SER 32 -0.0000
SER 32GLU 33 -0.0097
GLU 33VAL 34 -0.0000
VAL 34PHE 35 0.0036
PHE 35ALA 36 -0.0003
ALA 36ASN 37 -0.0213
ASN 37ARG 38 0.0000
ARG 38VAL 39 -0.0225
VAL 39ILE 40 0.0000
ILE 40THR 41 -0.0127
THR 41ASP 42 -0.0002
ASP 42ASP 43 0.0007
ASP 43ILE 44 0.0001
ILE 44GLU 45 -0.0037
GLU 45LEU 46 -0.0001
LEU 46LEU 47 0.0003
LEU 47LYS 48 -0.0002
LYS 48LYS 49 -0.0183
LYS 49ILE 50 -0.0003
ILE 50LEU 51 0.0253
LEU 51ALA 52 -0.0001
ALA 52TYR 53 -0.0478
TYR 53PHE 54 0.0003
PHE 54LEU 55 -0.0581
LEU 55PRO 56 0.0001
PRO 56GLU 57 -0.1842
GLU 57ASP 58 0.0001
ASP 58ALA 59 0.0612
ALA 59ILE 60 -0.0002
ILE 60LEU 61 0.0768
LEU 61LYS 62 0.0000
LYS 62GLY 63 0.0166
GLY 63GLY 64 0.0001
GLY 64HIS 65 -0.0240
HIS 65TYR 66 -0.0001
TYR 66ASP 67 -0.0075
ASP 67ASN 68 0.0003
ASN 68GLN 69 0.0138
GLN 69LEU 70 0.0000
LEU 70GLN 71 -0.0176
GLN 71ASN 72 0.0003
ASN 72GLY 73 0.0477
GLY 73ILE 74 -0.0002
ILE 74LYS 75 0.0601
LYS 75ARG 76 -0.0001
ARG 76VAL 77 -0.0143
VAL 77LYS 78 0.0003
LYS 78GLU 79 0.0367
GLU 79PHE 80 -0.0002
PHE 80LEU 81 0.0079
LEU 81GLU 82 0.0002
GLU 82SER 83 0.0157
SER 83SER 84 -0.0002
SER 84PRO 85 0.0063
PRO 85ASN 86 -0.0002
ASN 86THR 87 0.0409
THR 87GLN 88 -0.0003
GLN 88TRP 89 0.0023
TRP 89GLU 90 -0.0002
GLU 90LEU 91 0.0034
LEU 91ARG 92 0.0001
ARG 92ALA 93 -0.0053
ALA 93PHE 94 -0.0002
PHE 94MET 95 -0.0084
MET 95ALA 96 -0.0002
ALA 96VAL 97 0.0122
VAL 97MET 98 0.0001
MET 98HIS 99 -0.0455
HIS 99PHE 100 0.0002
PHE 100SER 101 0.0330
SER 101LEU 102 -0.0001
LEU 102THR 103 -0.0723
THR 103ALA 104 0.0005
ALA 104ASP 105 -0.1425
ASP 105ARG 106 0.0002
ARG 106ILE 107 0.0173
ILE 107ASP 108 -0.0000
ASP 108ASP 109 0.0031
ASP 109ASP 110 0.0001
ASP 110ILE 111 0.0067
ILE 111LEU 112 -0.0000
LEU 112LYS 113 0.0003
LYS 113VAL 114 0.0000
VAL 114ILE 115 -0.0219
ILE 115VAL 116 -0.0002
VAL 116ASP 117 -0.0161
ASP 117SER 118 0.0001
SER 118MET 119 0.0131
MET 119ASN 120 -0.0001
ASN 120HIS 121 -0.0217
HIS 121HIS 122 -0.0001
HIS 122GLY 123 -0.0070
GLY 123ASP 124 0.0001
ASP 124ALA 125 -0.0047
ALA 125ARG 126 -0.0004
ARG 126SER 127 -0.0098
SER 127LYS 128 -0.0002
LYS 128LEU 129 0.0360
LEU 129ARG 130 -0.0001
ARG 130GLU 131 -0.0758
GLU 131GLU 132 0.0000
GLU 132LEU 133 0.0332
LEU 133ALA 134 -0.0003
ALA 134GLU 135 -0.0472
GLU 135LEU 136 0.0003
LEU 136THR 137 -0.0004
THR 137ALA 138 -0.0003
ALA 138GLU 139 0.0174
GLU 139LEU 140 -0.0003
LEU 140LYS 141 -0.0651
LYS 141ILE 142 -0.0004
ILE 142TYR 143 -0.0172
TYR 143SER 144 -0.0000
SER 144VAL 145 -0.0257
VAL 145ILE 146 -0.0005
ILE 146GLN 147 -0.0018
GLN 147ALA 148 -0.0004
ALA 148GLU 149 0.0172
GLU 149ILE 150 0.0001
ILE 150ASN 151 0.0191
ASN 151LYS 152 -0.0003
LYS 152HIS 153 -0.0090
HIS 153LEU 154 0.0002
LEU 154SER 155 -0.0052
SER 155SER 156 -0.0001
SER 156SER 157 -0.0052
SER 157GLY 158 -0.0001
GLY 158THR 159 0.0251
THR 159ILE 160 -0.0002
ILE 160ASN 161 0.1621
ASN 161ILE 162 0.0000
ILE 162HIS 163 0.0620
HIS 163ASP 164 0.0002
ASP 164LYS 165 -0.0031
LYS 165SER 166 -0.0004
SER 166ILE 167 -0.0895
ILE 167ASN 168 0.0002
ASN 168LEU 169 -0.0733
LEU 169MET 170 -0.0000
MET 170ASP 171 0.0666
ASP 171LYS 172 -0.0001
LYS 172ASN 173 0.0040
ASN 173LEU 174 0.0001
LEU 174TYR 175 0.0019
TYR 175GLY 176 0.0003
GLY 176TYR 177 0.0014
TYR 177THR 178 -0.0003
THR 178ASP 179 0.0029
ASP 179GLU 180 0.0003
GLU 180GLU 181 -0.0178
GLU 181ILE 182 0.0003
ILE 182PHE 183 -0.0173
PHE 183LYS 184 0.0003
LYS 184ALA 185 -0.0079
ALA 185SER 186 0.0001
SER 186ALA 187 -0.0285
ALA 187GLU 188 0.0002
GLU 188TYR 189 -0.0379
TYR 189LYS 190 0.0002
LYS 190ILE 191 0.0656
ILE 191LEU 192 -0.0001
LEU 192GLU 193 -0.0572
GLU 193LYS 194 0.0002
LYS 194MET 195 0.0396
MET 195PRO 196 0.0003
PRO 196GLN 197 -0.2035
GLN 197THR 198 0.0002
THR 198THR 199 -0.0353
THR 199ILE 200 0.0001
ILE 200GLN 201 0.2097
GLN 201VAL 202 -0.0001
VAL 202ASP 203 0.0046
ASP 203GLY 204 -0.0002
GLY 204SER 205 -0.0707
SER 205GLU 206 -0.0000
GLU 206LYS 207 -0.0972
LYS 207LYS 208 -0.0000
LYS 208ILE 209 -0.0205
ILE 209VAL 210 -0.0000
VAL 210SER 211 -0.0088
SER 211ILE 212 -0.0001
ILE 212LYS 213 -0.0222
LYS 213ASP 214 0.0003
ASP 214PHE 215 -0.0502
PHE 215LEU 216 -0.0004
LEU 216GLY 217 0.0155
GLY 217SER 218 0.0004
SER 218GLU 219 -0.0048
GLU 219ASN 220 0.0001
ASN 220LYS 221 -0.1472
LYS 221ARG 222 -0.0000
ARG 222THR 223 0.0527
THR 223GLY 224 0.0001
GLY 224ALA 225 -0.0215
ALA 225LEU 226 0.0003
LEU 226GLY 227 0.0100
GLY 227ASN 228 0.0002
ASN 228LEU 229 0.0323
LEU 229LYS 230 0.0001
LYS 230ASN 231 0.1104
ASN 231SER 232 -0.0001
SER 232TYR 233 0.1197
TYR 233SER 234 0.0004
SER 234TYR 235 0.0204
TYR 235ASN 236 -0.0004
ASN 236LEU 237 -0.0222
LEU 237ASN 238 -0.0000
ASN 238ASP 239 -0.0012
ASP 239LEU 240 0.0000
LEU 240VAL 241 -0.0172
VAL 241SER 242 0.0000
SER 242GLN 243 -0.0015
GLN 243LYS 244 0.0004
LYS 244THR 245 0.0036
THR 245THR 246 -0.0002
THR 246GLN 247 -0.0082
GLN 247LEU 248 0.0005
LEU 248SER 249 -0.0020
SER 249ASP 250 -0.0000
ASP 250ILE 251 -0.0008
ILE 251THR 252 -0.0005
THR 252SER 253 -0.1163
SER 253ARG 254 -0.0001
ARG 254PHE 255 -0.0492
PHE 255ASN 256 0.0001
ASN 256SER 257 -0.0666
SER 257ALA 258 0.0002
ALA 258ILE 259 -0.0089
ILE 259GLU 260 -0.0005
GLU 260ALA 261 -0.0220
ALA 261LEU 262 0.0004
LEU 262ASN 263 0.0091
ASN 263ARG 264 0.0004
ARG 264PHE 265 0.0017
PHE 265ILE 266 -0.0001
ILE 266GLN 267 0.0011
GLN 267LYS 268 0.0002
LYS 268TYR 269 0.0241
TYR 269ASP 270 -0.0005
ASP 270SER 271 -0.0158
SER 271VAL 272 0.0001
VAL 272MET 273 0.0492
MET 273GLN 274 -0.0003
GLN 274ARG 275 0.0234
ARG 275LEU 276 -0.0003

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.