CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0000
HIS 2MET 3 -0.0591
MET 3GLY 4 0.0000
GLY 4SER 5 0.0990
SER 5SER 6 0.0002
SER 6VAL 7 -0.0019
VAL 7LEU 8 -0.0001
LEU 8GLU 9 -0.1074
GLU 9GLU 10 0.0002
GLU 10LEU 11 0.0192
LEU 11VAL 12 0.0002
VAL 12GLN 13 -0.0366
GLN 13LEU 14 -0.0002
LEU 14VAL 15 -0.0148
VAL 15LYS 16 -0.0000
LYS 16ASP 17 -0.0115
ASP 17LYS 18 0.0002
LYS 18ASN 19 -0.0350
ASN 19ILE 20 0.0002
ILE 20ASP 21 -0.0301
ASP 21ILE 22 0.0001
ILE 22SER 23 -0.0098
SER 23ILE 24 -0.0001
ILE 24LYS 25 0.0195
LYS 25TYR 26 -0.0000
TYR 26ASP 27 -0.0036
ASP 27PRO 28 -0.0002
PRO 28ARG 29 -0.0055
ARG 29LYS 30 -0.0001
LYS 30ASP 31 -0.0983
ASP 31SER 32 -0.0000
SER 32GLU 33 -0.0333
GLU 33VAL 34 0.0003
VAL 34PHE 35 0.0427
PHE 35ALA 36 -0.0001
ALA 36ASN 37 -0.0055
ASN 37ARG 38 -0.0003
ARG 38VAL 39 -0.0134
VAL 39ILE 40 0.0000
ILE 40THR 41 -0.0105
THR 41ASP 42 0.0001
ASP 42ASP 43 -0.0015
ASP 43ILE 44 0.0005
ILE 44GLU 45 -0.0197
GLU 45LEU 46 -0.0001
LEU 46LEU 47 -0.0026
LEU 47LYS 48 0.0000
LYS 48LYS 49 -0.0357
LYS 49ILE 50 0.0001
ILE 50LEU 51 0.0488
LEU 51ALA 52 -0.0001
ALA 52TYR 53 -0.0600
TYR 53PHE 54 0.0001
PHE 54LEU 55 -0.0523
LEU 55PRO 56 -0.0002
PRO 56GLU 57 -0.2469
GLU 57ASP 58 0.0002
ASP 58ALA 59 0.0638
ALA 59ILE 60 -0.0000
ILE 60LEU 61 0.1205
LEU 61LYS 62 0.0002
LYS 62GLY 63 0.0682
GLY 63GLY 64 0.0003
GLY 64HIS 65 0.1036
HIS 65TYR 66 0.0002
TYR 66ASP 67 -0.0016
ASP 67ASN 68 0.0001
ASN 68GLN 69 0.0833
GLN 69LEU 70 0.0001
LEU 70GLN 71 -0.0004
GLN 71ASN 72 0.0002
ASN 72GLY 73 0.0883
GLY 73ILE 74 -0.0002
ILE 74LYS 75 0.1262
LYS 75ARG 76 -0.0002
ARG 76VAL 77 0.0009
VAL 77LYS 78 -0.0001
LYS 78GLU 79 0.0631
GLU 79PHE 80 0.0003
PHE 80LEU 81 0.0111
LEU 81GLU 82 0.0002
GLU 82SER 83 0.0312
SER 83SER 84 0.0001
SER 84PRO 85 0.0099
PRO 85ASN 86 0.0003
ASN 86THR 87 0.0409
THR 87GLN 88 -0.0001
GLN 88TRP 89 -0.0151
TRP 89GLU 90 0.0001
GLU 90LEU 91 0.0322
LEU 91ARG 92 0.0001
ARG 92ALA 93 -0.0071
ALA 93PHE 94 -0.0000
PHE 94MET 95 0.0069
MET 95ALA 96 -0.0002
ALA 96VAL 97 0.0087
VAL 97MET 98 0.0001
MET 98HIS 99 -0.0306
HIS 99PHE 100 -0.0000
PHE 100SER 101 0.0639
SER 101LEU 102 0.0003
LEU 102THR 103 -0.0356
THR 103ALA 104 0.0000
ALA 104ASP 105 -0.0087
ASP 105ARG 106 -0.0004
ARG 106ILE 107 -0.0238
ILE 107ASP 108 0.0001
ASP 108ASP 109 0.0139
ASP 109ASP 110 -0.0002
ASP 110ILE 111 0.0256
ILE 111LEU 112 -0.0001
LEU 112LYS 113 -0.0335
LYS 113VAL 114 0.0000
VAL 114ILE 115 -0.0195
ILE 115VAL 116 0.0002
VAL 116ASP 117 -0.0225
ASP 117SER 118 -0.0003
SER 118MET 119 -0.0175
MET 119ASN 120 -0.0001
ASN 120HIS 121 -0.0278
HIS 121HIS 122 0.0002
HIS 122GLY 123 -0.0891
GLY 123ASP 124 0.0000
ASP 124ALA 125 0.0057
ALA 125ARG 126 0.0000
ARG 126SER 127 -0.0445
SER 127LYS 128 0.0002
LYS 128LEU 129 0.0187
LEU 129ARG 130 0.0001
ARG 130GLU 131 -0.1191
GLU 131GLU 132 0.0000
GLU 132LEU 133 0.1058
LEU 133ALA 134 -0.0000
ALA 134GLU 135 0.0143
GLU 135LEU 136 -0.0003
LEU 136THR 137 0.0221
THR 137ALA 138 -0.0001
ALA 138GLU 139 -0.0026
GLU 139LEU 140 0.0000
LEU 140LYS 141 -0.0219
LYS 141ILE 142 0.0000
ILE 142TYR 143 0.0226
TYR 143SER 144 0.0000
SER 144VAL 145 -0.0072
VAL 145ILE 146 0.0001
ILE 146GLN 147 0.0229
GLN 147ALA 148 0.0001
ALA 148GLU 149 -0.0288
GLU 149ILE 150 0.0001
ILE 150ASN 151 -0.0297
ASN 151LYS 152 0.0003
LYS 152HIS 153 0.0087
HIS 153LEU 154 0.0002
LEU 154SER 155 -0.0017
SER 155SER 156 0.0004
SER 156SER 157 0.0036
SER 157GLY 158 0.0004
GLY 158THR 159 -0.0719
THR 159ILE 160 -0.0004
ILE 160ASN 161 -0.1425
ASN 161ILE 162 0.0002
ILE 162HIS 163 -0.0264
HIS 163ASP 164 -0.0001
ASP 164LYS 165 -0.0337
LYS 165SER 166 0.0001
SER 166ILE 167 0.1456
ILE 167ASN 168 0.0000
ASN 168LEU 169 -0.0811
LEU 169MET 170 0.0002
MET 170ASP 171 -0.0500
ASP 171LYS 172 0.0002
LYS 172ASN 173 -0.0049
ASN 173LEU 174 0.0002
LEU 174TYR 175 0.0008
TYR 175GLY 176 -0.0005
GLY 176TYR 177 -0.0062
TYR 177THR 178 -0.0002
THR 178ASP 179 -0.0109
ASP 179GLU 180 -0.0000
GLU 180GLU 181 0.0315
GLU 181ILE 182 0.0002
ILE 182PHE 183 0.0304
PHE 183LYS 184 -0.0003
LYS 184ALA 185 0.0032
ALA 185SER 186 -0.0002
SER 186ALA 187 -0.1156
ALA 187GLU 188 -0.0003
GLU 188TYR 189 -0.0213
TYR 189LYS 190 0.0004
LYS 190ILE 191 0.0269
ILE 191LEU 192 -0.0000
LEU 192GLU 193 -0.0053
GLU 193LYS 194 -0.0002
LYS 194MET 195 -0.0294
MET 195PRO 196 -0.0000
PRO 196GLN 197 0.1262
GLN 197THR 198 0.0001
THR 198THR 199 0.2270
THR 199ILE 200 0.0002
ILE 200GLN 201 -0.2250
GLN 201VAL 202 -0.0003
VAL 202ASP 203 -0.0933
ASP 203GLY 204 -0.0000
GLY 204SER 205 0.0808
SER 205GLU 206 -0.0001
GLU 206LYS 207 -0.1435
LYS 207LYS 208 0.0004
LYS 208ILE 209 -0.0769
ILE 209VAL 210 0.0001
VAL 210SER 211 0.0028
SER 211ILE 212 0.0003
ILE 212LYS 213 0.0673
LYS 213ASP 214 -0.0002
ASP 214PHE 215 -0.0644
PHE 215LEU 216 0.0001
LEU 216GLY 217 0.0771
GLY 217SER 218 -0.0001
SER 218GLU 219 -0.0177
GLU 219ASN 220 -0.0001
ASN 220LYS 221 -0.0509
LYS 221ARG 222 -0.0001
ARG 222THR 223 -0.0914
THR 223GLY 224 0.0002
GLY 224ALA 225 -0.1510
ALA 225LEU 226 0.0000
LEU 226GLY 227 -0.1367
GLY 227ASN 228 0.0000
ASN 228LEU 229 0.0854
LEU 229LYS 230 0.0002
LYS 230ASN 231 -0.0159
ASN 231SER 232 0.0001
SER 232TYR 233 -0.0553
TYR 233SER 234 0.0000
SER 234TYR 235 -0.0338
TYR 235ASN 236 -0.0000
ASN 236LEU 237 -0.0082
LEU 237ASN 238 -0.0002
ASN 238ASP 239 0.0027
ASP 239LEU 240 0.0001
LEU 240VAL 241 0.0137
VAL 241SER 242 -0.0003
SER 242GLN 243 0.0152
GLN 243LYS 244 -0.0003
LYS 244THR 245 0.0291
THR 245THR 246 0.0002
THR 246GLN 247 0.0617
GLN 247LEU 248 0.0003
LEU 248SER 249 0.0098
SER 249ASP 250 0.0001
ASP 250ILE 251 0.0640
ILE 251THR 252 -0.0000
THR 252SER 253 0.0267
SER 253ARG 254 -0.0000
ARG 254PHE 255 -0.0145
PHE 255ASN 256 -0.0001
ASN 256SER 257 0.0739
SER 257ALA 258 0.0003
ALA 258ILE 259 0.0456
ILE 259GLU 260 0.0002
GLU 260ALA 261 -0.0065
ALA 261LEU 262 -0.0001
LEU 262ASN 263 0.0442
ASN 263ARG 264 -0.0000
ARG 264PHE 265 0.0151
PHE 265ILE 266 -0.0002
ILE 266GLN 267 0.0250
GLN 267LYS 268 -0.0001
LYS 268TYR 269 0.0641
TYR 269ASP 270 0.0001
ASP 270SER 271 -0.0238
SER 271VAL 272 0.0002
VAL 272MET 273 0.1446
MET 273GLN 274 -0.0002
GLN 274ARG 275 0.0428
ARG 275LEU 276 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.