CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 0.0002
HIS 2MET 3 0.0050
MET 3GLY 4 -0.0000
GLY 4SER 5 0.0956
SER 5SER 6 0.0001
SER 6VAL 7 -0.0440
VAL 7LEU 8 0.0001
LEU 8GLU 9 -0.0368
GLU 9GLU 10 -0.0001
GLU 10LEU 11 0.0243
LEU 11VAL 12 0.0003
VAL 12GLN 13 -0.0372
GLN 13LEU 14 0.0002
LEU 14VAL 15 0.0405
VAL 15LYS 16 -0.0001
LYS 16ASP 17 -0.0475
ASP 17LYS 18 0.0002
LYS 18ASN 19 0.0189
ASN 19ILE 20 0.0001
ILE 20ASP 21 0.1109
ASP 21ILE 22 0.0004
ILE 22SER 23 0.1359
SER 23ILE 24 -0.0002
ILE 24LYS 25 0.0631
LYS 25TYR 26 0.0002
TYR 26ASP 27 0.0112
ASP 27PRO 28 -0.0001
PRO 28ARG 29 0.0398
ARG 29LYS 30 -0.0002
LYS 30ASP 31 0.0191
ASP 31SER 32 -0.0001
SER 32GLU 33 0.0223
GLU 33VAL 34 -0.0002
VAL 34PHE 35 0.0001
PHE 35ALA 36 -0.0001
ALA 36ASN 37 0.0468
ASN 37ARG 38 -0.0001
ARG 38VAL 39 0.0927
VAL 39ILE 40 -0.0000
ILE 40THR 41 0.0368
THR 41ASP 42 0.0002
ASP 42ASP 43 -0.0163
ASP 43ILE 44 -0.0002
ILE 44GLU 45 -0.0072
GLU 45LEU 46 -0.0002
LEU 46LEU 47 -0.0049
LEU 47LYS 48 -0.0000
LYS 48LYS 49 -0.0222
LYS 49ILE 50 0.0002
ILE 50LEU 51 -0.0070
LEU 51ALA 52 -0.0001
ALA 52TYR 53 -0.0833
TYR 53PHE 54 -0.0002
PHE 54LEU 55 -0.1731
LEU 55PRO 56 0.0000
PRO 56GLU 57 -0.1534
GLU 57ASP 58 0.0001
ASP 58ALA 59 0.0694
ALA 59ILE 60 0.0005
ILE 60LEU 61 -0.0346
LEU 61LYS 62 0.0001
LYS 62GLY 63 -0.0146
GLY 63GLY 64 0.0000
GLY 64HIS 65 -0.0749
HIS 65TYR 66 -0.0004
TYR 66ASP 67 -0.0045
ASP 67ASN 68 0.0002
ASN 68GLN 69 -0.0276
GLN 69LEU 70 0.0000
LEU 70GLN 71 -0.0603
GLN 71ASN 72 0.0001
ASN 72GLY 73 -0.0123
GLY 73ILE 74 0.0001
ILE 74LYS 75 -0.0633
LYS 75ARG 76 -0.0000
ARG 76VAL 77 -0.0515
VAL 77LYS 78 -0.0000
LYS 78GLU 79 0.0076
GLU 79PHE 80 -0.0001
PHE 80LEU 81 -0.1080
LEU 81GLU 82 0.0000
GLU 82SER 83 0.0046
SER 83SER 84 -0.0003
SER 84PRO 85 -0.0605
PRO 85ASN 86 -0.0003
ASN 86THR 87 -0.0524
THR 87GLN 88 0.0002
GLN 88TRP 89 0.0103
TRP 89GLU 90 0.0002
GLU 90LEU 91 0.0135
LEU 91ARG 92 -0.0001
ARG 92ALA 93 0.0023
ALA 93PHE 94 0.0002
PHE 94MET 95 -0.0153
MET 95ALA 96 -0.0001
ALA 96VAL 97 0.0048
VAL 97MET 98 -0.0005
MET 98HIS 99 -0.0495
HIS 99PHE 100 -0.0002
PHE 100SER 101 -0.0512
SER 101LEU 102 0.0002
LEU 102THR 103 -0.0675
THR 103ALA 104 -0.0005
ALA 104ASP 105 -0.1803
ASP 105ARG 106 0.0000
ARG 106ILE 107 0.0513
ILE 107ASP 108 -0.0004
ASP 108ASP 109 -0.0653
ASP 109ASP 110 -0.0001
ASP 110ILE 111 0.0222
ILE 111LEU 112 -0.0001
LEU 112LYS 113 0.0135
LYS 113VAL 114 0.0001
VAL 114ILE 115 0.0560
ILE 115VAL 116 -0.0003
VAL 116ASP 117 0.0870
ASP 117SER 118 -0.0001
SER 118MET 119 -0.0497
MET 119ASN 120 -0.0004
ASN 120HIS 121 0.0823
HIS 121HIS 122 -0.0003
HIS 122GLY 123 0.1021
GLY 123ASP 124 -0.0001
ASP 124ALA 125 0.0323
ALA 125ARG 126 0.0003
ARG 126SER 127 -0.0288
SER 127LYS 128 -0.0005
LYS 128LEU 129 -0.0369
LEU 129ARG 130 -0.0001
ARG 130GLU 131 0.0431
GLU 131GLU 132 0.0004
GLU 132LEU 133 -0.0045
LEU 133ALA 134 0.0003
ALA 134GLU 135 0.1157
GLU 135LEU 136 0.0002
LEU 136THR 137 -0.0093
THR 137ALA 138 0.0001
ALA 138GLU 139 -0.0219
GLU 139LEU 140 -0.0001
LEU 140LYS 141 -0.0906
LYS 141ILE 142 -0.0001
ILE 142TYR 143 0.0915
TYR 143SER 144 0.0001
SER 144VAL 145 -0.0486
VAL 145ILE 146 0.0004
ILE 146GLN 147 0.0816
GLN 147ALA 148 0.0003
ALA 148GLU 149 0.0206
GLU 149ILE 150 0.0001
ILE 150ASN 151 0.0705
ASN 151LYS 152 -0.0001
LYS 152HIS 153 -0.0089
HIS 153LEU 154 -0.0001
LEU 154SER 155 -0.0045
SER 155SER 156 0.0000
SER 156SER 157 0.0007
SER 157GLY 158 -0.0002
GLY 158THR 159 0.0914
THR 159ILE 160 0.0005
ILE 160ASN 161 0.0859
ASN 161ILE 162 -0.0000
ILE 162HIS 163 0.0006
HIS 163ASP 164 -0.0001
ASP 164LYS 165 0.0404
LYS 165SER 166 0.0001
SER 166ILE 167 -0.0115
ILE 167ASN 168 0.0000
ASN 168LEU 169 0.0058
LEU 169MET 170 0.0000
MET 170ASP 171 -0.0535
ASP 171LYS 172 -0.0003
LYS 172ASN 173 -0.0070
ASN 173LEU 174 0.0001
LEU 174TYR 175 -0.0388
TYR 175GLY 176 0.0003
GLY 176TYR 177 -0.0117
TYR 177THR 178 -0.0002
THR 178ASP 179 -0.0071
ASP 179GLU 180 -0.0001
GLU 180GLU 181 0.0375
GLU 181ILE 182 -0.0002
ILE 182PHE 183 0.0455
PHE 183LYS 184 -0.0002
LYS 184ALA 185 0.0165
ALA 185SER 186 0.0002
SER 186ALA 187 -0.2519
ALA 187GLU 188 -0.0003
GLU 188TYR 189 -0.0402
TYR 189LYS 190 0.0001
LYS 190ILE 191 -0.0121
ILE 191LEU 192 0.0001
LEU 192GLU 193 0.0214
GLU 193LYS 194 0.0001
LYS 194MET 195 0.0094
MET 195PRO 196 -0.0001
PRO 196GLN 197 -0.1002
GLN 197THR 198 0.0005
THR 198THR 199 -0.3528
THR 199ILE 200 0.0003
ILE 200GLN 201 -0.0696
GLN 201VAL 202 0.0005
VAL 202ASP 203 0.0927
ASP 203GLY 204 0.0001
GLY 204SER 205 -0.0046
SER 205GLU 206 -0.0003
GLU 206LYS 207 0.1751
LYS 207LYS 208 -0.0000
LYS 208ILE 209 0.0435
ILE 209VAL 210 -0.0001
VAL 210SER 211 0.0125
SER 211ILE 212 -0.0001
ILE 212LYS 213 0.0203
LYS 213ASP 214 0.0001
ASP 214PHE 215 -0.1032
PHE 215LEU 216 0.0001
LEU 216GLY 217 0.0263
GLY 217SER 218 -0.0001
SER 218GLU 219 0.0712
GLU 219ASN 220 0.0003
ASN 220LYS 221 0.0517
LYS 221ARG 222 0.0003
ARG 222THR 223 -0.0508
THR 223GLY 224 -0.0001
GLY 224ALA 225 0.0629
ALA 225LEU 226 0.0002
LEU 226GLY 227 0.0674
GLY 227ASN 228 -0.0001
ASN 228LEU 229 -0.0385
LEU 229LYS 230 0.0005
LYS 230ASN 231 -0.0389
ASN 231SER 232 0.0001
SER 232TYR 233 0.0247
TYR 233SER 234 -0.0002
SER 234TYR 235 0.0373
TYR 235ASN 236 -0.0002
ASN 236LEU 237 -0.0239
LEU 237ASN 238 -0.0000
ASN 238ASP 239 -0.0008
ASP 239LEU 240 0.0002
LEU 240VAL 241 0.0815
VAL 241SER 242 -0.0002
SER 242GLN 243 -0.0125
GLN 243LYS 244 0.0003
LYS 244THR 245 0.0437
THR 245THR 246 0.0001
THR 246GLN 247 -0.0245
GLN 247LEU 248 0.0002
LEU 248SER 249 0.1133
SER 249ASP 250 0.0002
ASP 250ILE 251 0.0453
ILE 251THR 252 -0.0003
THR 252SER 253 -0.0324
SER 253ARG 254 0.0000
ARG 254PHE 255 0.0041
PHE 255ASN 256 0.0000
ASN 256SER 257 -0.1063
SER 257ALA 258 -0.0003
ALA 258ILE 259 0.0249
ILE 259GLU 260 -0.0002
GLU 260ALA 261 -0.0488
ALA 261LEU 262 -0.0001
LEU 262ASN 263 0.0325
ASN 263ARG 264 -0.0001
ARG 264PHE 265 0.0215
PHE 265ILE 266 -0.0000
ILE 266GLN 267 0.0113
GLN 267LYS 268 -0.0001
LYS 268TYR 269 -0.0616
TYR 269ASP 270 0.0004
ASP 270SER 271 -0.0027
SER 271VAL 272 -0.0002
VAL 272MET 273 -0.1122
MET 273GLN 274 0.0000
GLN 274ARG 275 -0.0350
ARG 275LEU 276 -0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.