CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0000
HIS 2MET 3 0.0500
MET 3GLY 4 0.0003
GLY 4SER 5 0.2575
SER 5SER 6 -0.0003
SER 6VAL 7 0.0964
VAL 7LEU 8 0.0002
LEU 8GLU 9 -0.0472
GLU 9GLU 10 0.0001
GLU 10LEU 11 0.0722
LEU 11VAL 12 -0.0000
VAL 12GLN 13 -0.0434
GLN 13LEU 14 0.0000
LEU 14VAL 15 0.0200
VAL 15LYS 16 0.0002
LYS 16ASP 17 -0.0440
ASP 17LYS 18 -0.0002
LYS 18ASN 19 -0.0037
ASN 19ILE 20 0.0003
ILE 20ASP 21 0.0357
ASP 21ILE 22 0.0002
ILE 22SER 23 0.0825
SER 23ILE 24 0.0002
ILE 24LYS 25 0.0453
LYS 25TYR 26 -0.0003
TYR 26ASP 27 -0.0074
ASP 27PRO 28 -0.0000
PRO 28ARG 29 -0.0026
ARG 29LYS 30 -0.0001
LYS 30ASP 31 -0.0338
ASP 31SER 32 0.0001
SER 32GLU 33 -0.0015
GLU 33VAL 34 -0.0003
VAL 34PHE 35 0.0034
PHE 35ALA 36 -0.0001
ALA 36ASN 37 0.0572
ASN 37ARG 38 -0.0002
ARG 38VAL 39 0.0625
VAL 39ILE 40 -0.0003
ILE 40THR 41 -0.0020
THR 41ASP 42 -0.0001
ASP 42ASP 43 0.0033
ASP 43ILE 44 0.0002
ILE 44GLU 45 -0.0077
GLU 45LEU 46 0.0004
LEU 46LEU 47 -0.0132
LEU 47LYS 48 -0.0001
LYS 48LYS 49 -0.0861
LYS 49ILE 50 0.0003
ILE 50LEU 51 -0.0436
LEU 51ALA 52 -0.0002
ALA 52TYR 53 -0.1651
TYR 53PHE 54 -0.0001
PHE 54LEU 55 -0.2400
LEU 55PRO 56 -0.0000
PRO 56GLU 57 -0.2390
GLU 57ASP 58 -0.0003
ASP 58ALA 59 0.0821
ALA 59ILE 60 -0.0002
ILE 60LEU 61 0.0422
LEU 61LYS 62 -0.0003
LYS 62GLY 63 0.0919
GLY 63GLY 64 0.0002
GLY 64HIS 65 0.2428
HIS 65TYR 66 -0.0001
TYR 66ASP 67 0.0030
ASP 67ASN 68 0.0000
ASN 68GLN 69 0.2247
GLN 69LEU 70 0.0003
LEU 70GLN 71 -0.0484
GLN 71ASN 72 -0.0003
ASN 72GLY 73 0.0555
GLY 73ILE 74 0.0002
ILE 74LYS 75 0.0385
LYS 75ARG 76 -0.0002
ARG 76VAL 77 0.0097
VAL 77LYS 78 0.0001
LYS 78GLU 79 0.0136
GLU 79PHE 80 0.0000
PHE 80LEU 81 0.0592
LEU 81GLU 82 0.0000
GLU 82SER 83 0.0084
SER 83SER 84 0.0000
SER 84PRO 85 -0.0149
PRO 85ASN 86 -0.0000
ASN 86THR 87 0.0215
THR 87GLN 88 0.0001
GLN 88TRP 89 0.0190
TRP 89GLU 90 -0.0003
GLU 90LEU 91 -0.0138
LEU 91ARG 92 0.0001
ARG 92ALA 93 0.0372
ALA 93PHE 94 -0.0001
PHE 94MET 95 -0.0128
MET 95ALA 96 -0.0000
ALA 96VAL 97 0.0542
VAL 97MET 98 -0.0001
MET 98HIS 99 0.0260
HIS 99PHE 100 -0.0002
PHE 100SER 101 0.1342
SER 101LEU 102 -0.0004
LEU 102THR 103 0.0338
THR 103ALA 104 0.0003
ALA 104ASP 105 0.2581
ASP 105ARG 106 -0.0001
ARG 106ILE 107 -0.0557
ILE 107ASP 108 0.0003
ASP 108ASP 109 0.0300
ASP 109ASP 110 -0.0000
ASP 110ILE 111 0.0786
ILE 111LEU 112 0.0002
LEU 112LYS 113 -0.0111
LYS 113VAL 114 -0.0003
VAL 114ILE 115 -0.0285
ILE 115VAL 116 -0.0004
VAL 116ASP 117 -0.0354
ASP 117SER 118 0.0001
SER 118MET 119 -0.0287
MET 119ASN 120 0.0001
ASN 120HIS 121 0.0276
HIS 121HIS 122 0.0001
HIS 122GLY 123 0.0229
GLY 123ASP 124 -0.0002
ASP 124ALA 125 -0.0267
ALA 125ARG 126 0.0006
ARG 126SER 127 0.0386
SER 127LYS 128 -0.0000
LYS 128LEU 129 -0.0315
LEU 129ARG 130 -0.0005
ARG 130GLU 131 0.0233
GLU 131GLU 132 -0.0001
GLU 132LEU 133 0.0643
LEU 133ALA 134 0.0002
ALA 134GLU 135 0.0148
GLU 135LEU 136 -0.0001
LEU 136THR 137 0.0862
THR 137ALA 138 -0.0001
ALA 138GLU 139 0.0897
GLU 139LEU 140 0.0002
LEU 140LYS 141 0.4117
LYS 141ILE 142 -0.0001
ILE 142TYR 143 0.0361
TYR 143SER 144 -0.0001
SER 144VAL 145 0.0900
VAL 145ILE 146 -0.0002
ILE 146GLN 147 0.0040
GLN 147ALA 148 -0.0002
ALA 148GLU 149 0.0114
GLU 149ILE 150 0.0001
ILE 150ASN 151 0.0214
ASN 151LYS 152 0.0003
LYS 152HIS 153 -0.0186
HIS 153LEU 154 0.0001
LEU 154SER 155 -0.0126
SER 155SER 156 -0.0001
SER 156SER 157 0.0025
SER 157GLY 158 -0.0001
GLY 158THR 159 0.0120
THR 159ILE 160 0.0000
ILE 160ASN 161 0.0554
ASN 161ILE 162 -0.0001
ILE 162HIS 163 0.0204
HIS 163ASP 164 -0.0001
ASP 164LYS 165 -0.0099
LYS 165SER 166 -0.0001
SER 166ILE 167 -0.0439
ILE 167ASN 168 0.0002
ASN 168LEU 169 0.0390
LEU 169MET 170 -0.0004
MET 170ASP 171 -0.0477
ASP 171LYS 172 -0.0000
LYS 172ASN 173 0.0068
ASN 173LEU 174 -0.0003
LEU 174TYR 175 0.0020
TYR 175GLY 176 0.0001
GLY 176TYR 177 0.0518
TYR 177THR 178 -0.0004
THR 178ASP 179 0.0304
ASP 179GLU 180 0.0001
GLU 180GLU 181 -0.0030
GLU 181ILE 182 0.0001
ILE 182PHE 183 -0.0442
PHE 183LYS 184 -0.0002
LYS 184ALA 185 0.0105
ALA 185SER 186 -0.0001
SER 186ALA 187 0.4435
ALA 187GLU 188 -0.0001
GLU 188TYR 189 0.1204
TYR 189LYS 190 -0.0003
LYS 190ILE 191 -0.0909
ILE 191LEU 192 -0.0002
LEU 192GLU 193 0.0760
GLU 193LYS 194 -0.0001
LYS 194MET 195 -0.0035
MET 195PRO 196 0.0003
PRO 196GLN 197 0.0246
GLN 197THR 198 -0.0001
THR 198THR 199 0.0462
THR 199ILE 200 -0.0002
ILE 200GLN 201 0.1919
GLN 201VAL 202 -0.0002
VAL 202ASP 203 0.0332
ASP 203GLY 204 -0.0003
GLY 204SER 205 -0.0121
SER 205GLU 206 0.0001
GLU 206LYS 207 0.0749
LYS 207LYS 208 0.0003
LYS 208ILE 209 0.0639
ILE 209VAL 210 0.0000
VAL 210SER 211 0.0223
SER 211ILE 212 0.0002
ILE 212LYS 213 0.0003
LYS 213ASP 214 -0.0001
ASP 214PHE 215 0.0633
PHE 215LEU 216 -0.0001
LEU 216GLY 217 0.0393
GLY 217SER 218 0.0000
SER 218GLU 219 0.0212
GLU 219ASN 220 0.0002
ASN 220LYS 221 0.1121
LYS 221ARG 222 0.0001
ARG 222THR 223 -0.2331
THR 223GLY 224 -0.0001
GLY 224ALA 225 -0.0893
ALA 225LEU 226 -0.0001
LEU 226GLY 227 -0.0504
GLY 227ASN 228 0.0000
ASN 228LEU 229 0.0099
LEU 229LYS 230 -0.0000
LYS 230ASN 231 0.0192
ASN 231SER 232 -0.0000
SER 232TYR 233 0.0508
TYR 233SER 234 -0.0004
SER 234TYR 235 0.0162
TYR 235ASN 236 0.0001
ASN 236LEU 237 -0.0481
LEU 237ASN 238 -0.0001
ASN 238ASP 239 -0.0056
ASP 239LEU 240 0.0006
LEU 240VAL 241 0.0554
VAL 241SER 242 0.0001
SER 242GLN 243 0.0117
GLN 243LYS 244 -0.0000
LYS 244THR 245 0.0526
THR 245THR 246 -0.0002
THR 246GLN 247 0.0467
GLN 247LEU 248 0.0001
LEU 248SER 249 0.0344
SER 249ASP 250 -0.0003
ASP 250ILE 251 0.0805
ILE 251THR 252 0.0001
THR 252SER 253 0.2096
SER 253ARG 254 -0.0002
ARG 254PHE 255 0.1152
PHE 255ASN 256 0.0000
ASN 256SER 257 0.2845
SER 257ALA 258 0.0002
ALA 258ILE 259 0.1454
ILE 259GLU 260 0.0004
GLU 260ALA 261 0.0675
ALA 261LEU 262 -0.0001
LEU 262ASN 263 0.0368
ASN 263ARG 264 -0.0003
ARG 264PHE 265 -0.0441
PHE 265ILE 266 -0.0000
ILE 266GLN 267 0.0622
GLN 267LYS 268 -0.0001
LYS 268TYR 269 -0.0778
TYR 269ASP 270 0.0003
ASP 270SER 271 0.0071
SER 271VAL 272 -0.0000
VAL 272MET 273 -0.0931
MET 273GLN 274 -0.0002
GLN 274ARG 275 -0.0466
ARG 275LEU 276 0.0002

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.