CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0001
HIS 2MET 3 -0.0058
MET 3GLY 4 0.0000
GLY 4SER 5 -0.0094
SER 5SER 6 -0.0000
SER 6VAL 7 -0.0013
VAL 7LEU 8 -0.0001
LEU 8GLU 9 0.0081
GLU 9GLU 10 -0.0003
GLU 10LEU 11 -0.0028
LEU 11VAL 12 -0.0001
VAL 12GLN 13 0.0045
GLN 13LEU 14 -0.0004
LEU 14VAL 15 0.0011
VAL 15LYS 16 -0.0001
LYS 16ASP 17 0.0038
ASP 17LYS 18 0.0003
LYS 18ASN 19 0.0092
ASN 19ILE 20 -0.0001
ILE 20ASP 21 0.0030
ASP 21ILE 22 0.0001
ILE 22SER 23 0.0022
SER 23ILE 24 0.0002
ILE 24LYS 25 0.0006
LYS 25TYR 26 0.0001
TYR 26ASP 27 0.0044
ASP 27PRO 28 -0.0003
PRO 28ARG 29 0.0020
ARG 29LYS 30 0.0001
LYS 30ASP 31 0.0192
ASP 31SER 32 0.0002
SER 32GLU 33 0.0070
GLU 33VAL 34 -0.0001
VAL 34PHE 35 0.0049
PHE 35ALA 36 0.0004
ALA 36ASN 37 0.0066
ASN 37ARG 38 -0.0000
ARG 38VAL 39 0.0065
VAL 39ILE 40 0.0003
ILE 40THR 41 0.0019
THR 41ASP 42 -0.0000
ASP 42ASP 43 -0.0015
ASP 43ILE 44 0.0002
ILE 44GLU 45 -0.0001
GLU 45LEU 46 0.0003
LEU 46LEU 47 -0.0020
LEU 47LYS 48 0.0001
LYS 48LYS 49 0.0089
LYS 49ILE 50 -0.0003
ILE 50LEU 51 -0.0000
LEU 51ALA 52 -0.0002
ALA 52TYR 53 0.0198
TYR 53PHE 54 -0.0003
PHE 54LEU 55 0.0303
LEU 55PRO 56 0.0002
PRO 56GLU 57 0.0003
GLU 57ASP 58 -0.0001
ASP 58ALA 59 -0.0072
ALA 59ILE 60 0.0000
ILE 60LEU 61 0.0097
LEU 61LYS 62 0.0000
LYS 62GLY 63 0.0088
GLY 63GLY 64 -0.0000
GLY 64HIS 65 0.0171
HIS 65TYR 66 -0.0001
TYR 66ASP 67 0.0026
ASP 67ASN 68 0.0001
ASN 68GLN 69 0.0094
GLN 69LEU 70 0.0001
LEU 70GLN 71 0.0174
GLN 71ASN 72 0.0001
ASN 72GLY 73 0.0142
GLY 73ILE 74 -0.0002
ILE 74LYS 75 0.0208
LYS 75ARG 76 0.0000
ARG 76VAL 77 0.0123
VAL 77LYS 78 0.0000
LYS 78GLU 79 -0.0028
GLU 79PHE 80 -0.0001
PHE 80LEU 81 -0.0029
LEU 81GLU 82 -0.0002
GLU 82SER 83 -0.0051
SER 83SER 84 -0.0003
SER 84PRO 85 0.0117
PRO 85ASN 86 0.0002
ASN 86THR 87 -0.0074
THR 87GLN 88 0.0003
GLN 88TRP 89 -0.0115
TRP 89GLU 90 -0.0002
GLU 90LEU 91 0.0048
LEU 91ARG 92 0.0002
ARG 92ALA 93 0.0075
ALA 93PHE 94 0.0006
PHE 94MET 95 0.0065
MET 95ALA 96 -0.0002
ALA 96VAL 97 -0.0108
VAL 97MET 98 -0.0003
MET 98HIS 99 0.0263
HIS 99PHE 100 -0.0002
PHE 100SER 101 -0.0012
SER 101LEU 102 0.0003
LEU 102THR 103 0.0391
THR 103ALA 104 0.0005
ALA 104ASP 105 0.0662
ASP 105ARG 106 0.0000
ARG 106ILE 107 0.0010
ILE 107ASP 108 -0.0001
ASP 108ASP 109 0.0453
ASP 109ASP 110 0.0001
ASP 110ILE 111 -0.0104
ILE 111LEU 112 0.0004
LEU 112LYS 113 -0.0187
LYS 113VAL 114 -0.0000
VAL 114ILE 115 -0.0009
ILE 115VAL 116 -0.0001
VAL 116ASP 117 -0.0158
ASP 117SER 118 0.0003
SER 118MET 119 0.0066
MET 119ASN 120 0.0002
ASN 120HIS 121 -0.0216
HIS 121HIS 122 0.0001
HIS 122GLY 123 -0.0151
GLY 123ASP 124 0.0001
ASP 124ALA 125 -0.0029
ALA 125ARG 126 0.0001
ARG 126SER 127 0.0085
SER 127LYS 128 -0.0002
LYS 128LEU 129 -0.0400
LEU 129ARG 130 0.0002
ARG 130GLU 131 0.0899
GLU 131GLU 132 0.0003
GLU 132LEU 133 -0.0369
LEU 133ALA 134 0.0000
ALA 134GLU 135 0.0946
GLU 135LEU 136 -0.0002
LEU 136THR 137 0.0148
THR 137ALA 138 0.0003
ALA 138GLU 139 0.0217
GLU 139LEU 140 0.0003
LEU 140LYS 141 0.1302
LYS 141ILE 142 -0.0003
ILE 142TYR 143 -0.0042
TYR 143SER 144 -0.0002
SER 144VAL 145 0.0707
VAL 145ILE 146 0.0002
ILE 146GLN 147 0.0092
GLN 147ALA 148 0.0002
ALA 148GLU 149 0.0274
GLU 149ILE 150 -0.0000
ILE 150ASN 151 0.0031
ASN 151LYS 152 0.0000
LYS 152HIS 153 0.0060
HIS 153LEU 154 -0.0003
LEU 154SER 155 0.0097
SER 155SER 156 0.0001
SER 156SER 157 0.0003
SER 157GLY 158 0.0000
GLY 158THR 159 0.0133
THR 159ILE 160 -0.0001
ILE 160ASN 161 0.0098
ASN 161ILE 162 0.0002
ILE 162HIS 163 -0.0009
HIS 163ASP 164 -0.0000
ASP 164LYS 165 0.0063
LYS 165SER 166 0.0002
SER 166ILE 167 -0.0184
ILE 167ASN 168 -0.0001
ASN 168LEU 169 0.0197
LEU 169MET 170 0.0000
MET 170ASP 171 -0.0099
ASP 171LYS 172 -0.0002
LYS 172ASN 173 -0.0030
ASN 173LEU 174 0.0000
LEU 174TYR 175 -0.0107
TYR 175GLY 176 -0.0001
GLY 176TYR 177 0.0066
TYR 177THR 178 0.0004
THR 178ASP 179 0.0042
ASP 179GLU 180 -0.0001
GLU 180GLU 181 0.0032
GLU 181ILE 182 0.0000
ILE 182PHE 183 -0.0015
PHE 183LYS 184 -0.0001
LYS 184ALA 185 0.0016
ALA 185SER 186 -0.0001
SER 186ALA 187 -0.0085
ALA 187GLU 188 -0.0003
GLU 188TYR 189 0.0361
TYR 189LYS 190 0.0001
LYS 190ILE 191 -0.0103
ILE 191LEU 192 0.0001
LEU 192GLU 193 0.0174
GLU 193LYS 194 -0.0000
LYS 194MET 195 0.0234
MET 195PRO 196 -0.0002
PRO 196GLN 197 -0.0611
GLN 197THR 198 -0.0000
THR 198THR 199 -0.0587
THR 199ILE 200 0.0001
ILE 200GLN 201 -0.0137
GLN 201VAL 202 -0.0001
VAL 202ASP 203 0.0101
ASP 203GLY 204 0.0002
GLY 204SER 205 0.0022
SER 205GLU 206 0.0001
GLU 206LYS 207 0.0410
LYS 207LYS 208 -0.0001
LYS 208ILE 209 0.0226
ILE 209VAL 210 0.0001
VAL 210SER 211 0.0067
SER 211ILE 212 -0.0003
ILE 212LYS 213 -0.0134
LYS 213ASP 214 -0.0001
ASP 214PHE 215 -0.0041
PHE 215LEU 216 -0.0001
LEU 216GLY 217 0.0010
GLY 217SER 218 -0.0002
SER 218GLU 219 0.0059
GLU 219ASN 220 0.0003
ASN 220LYS 221 -0.0382
LYS 221ARG 222 -0.0003
ARG 222THR 223 0.0652
THR 223GLY 224 -0.0002
GLY 224ALA 225 0.0117
ALA 225LEU 226 -0.0002
LEU 226GLY 227 0.0028
GLY 227ASN 228 0.0001
ASN 228LEU 229 -0.0003
LEU 229LYS 230 -0.0002
LYS 230ASN 231 -0.0174
ASN 231SER 232 0.0001
SER 232TYR 233 -0.0051
TYR 233SER 234 0.0002
SER 234TYR 235 0.0140
TYR 235ASN 236 -0.0001
ASN 236LEU 237 0.0006
LEU 237ASN 238 -0.0001
ASN 238ASP 239 0.0016
ASP 239LEU 240 -0.0003
LEU 240VAL 241 -0.0009
VAL 241SER 242 -0.0002
SER 242GLN 243 0.0089
GLN 243LYS 244 0.0002
LYS 244THR 245 -0.0033
THR 245THR 246 0.0002
THR 246GLN 247 0.0222
GLN 247LEU 248 0.0001
LEU 248SER 249 -0.0173
SER 249ASP 250 0.0001
ASP 250ILE 251 -0.0470
ILE 251THR 252 0.0001
THR 252SER 253 0.0526
SER 253ARG 254 0.0001
ARG 254PHE 255 -0.0117
PHE 255ASN 256 -0.0000
ASN 256SER 257 0.1329
SER 257ALA 258 0.0003
ALA 258ILE 259 0.0217
ILE 259GLU 260 -0.0001
GLU 260ALA 261 0.0375
ALA 261LEU 262 -0.0002
LEU 262ASN 263 -0.0035
ASN 263ARG 264 -0.0003
ARG 264PHE 265 -0.0319
PHE 265ILE 266 0.0002
ILE 266GLN 267 0.0331
GLN 267LYS 268 0.0000
LYS 268TYR 269 -0.0107
TYR 269ASP 270 -0.0001
ASP 270SER 271 0.0426
SER 271VAL 272 0.0002
VAL 272MET 273 -0.0040
MET 273GLN 274 -0.0001
GLN 274ARG 275 -0.0008
ARG 275LEU 276 -0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.