CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0001
HIS 2MET 3 0.0273
MET 3GLY 4 0.0003
GLY 4SER 5 -0.0051
SER 5SER 6 -0.0003
SER 6VAL 7 0.0116
VAL 7LEU 8 0.0001
LEU 8GLU 9 0.0116
GLU 9GLU 10 -0.0000
GLU 10LEU 11 -0.0091
LEU 11VAL 12 -0.0001
VAL 12GLN 13 0.0005
GLN 13LEU 14 -0.0003
LEU 14VAL 15 0.0068
VAL 15LYS 16 0.0000
LYS 16ASP 17 -0.0006
ASP 17LYS 18 0.0001
LYS 18ASN 19 0.0121
ASN 19ILE 20 0.0000
ILE 20ASP 21 0.0108
ASP 21ILE 22 0.0003
ILE 22SER 23 0.0187
SER 23ILE 24 -0.0002
ILE 24LYS 25 0.0121
LYS 25TYR 26 0.0000
TYR 26ASP 27 -0.0192
ASP 27PRO 28 0.0002
PRO 28ARG 29 0.0026
ARG 29LYS 30 0.0000
LYS 30ASP 31 -0.0209
ASP 31SER 32 -0.0000
SER 32GLU 33 -0.0031
GLU 33VAL 34 -0.0005
VAL 34PHE 35 0.0067
PHE 35ALA 36 -0.0000
ALA 36ASN 37 0.0100
ASN 37ARG 38 -0.0003
ARG 38VAL 39 0.0080
VAL 39ILE 40 -0.0002
ILE 40THR 41 0.0046
THR 41ASP 42 -0.0002
ASP 42ASP 43 0.0009
ASP 43ILE 44 -0.0002
ILE 44GLU 45 -0.0039
GLU 45LEU 46 0.0002
LEU 46LEU 47 0.0000
LEU 47LYS 48 -0.0001
LYS 48LYS 49 -0.0035
LYS 49ILE 50 0.0001
ILE 50LEU 51 -0.0037
LEU 51ALA 52 0.0001
ALA 52TYR 53 -0.0003
TYR 53PHE 54 0.0000
PHE 54LEU 55 -0.0179
LEU 55PRO 56 0.0001
PRO 56GLU 57 0.0335
GLU 57ASP 58 -0.0002
ASP 58ALA 59 -0.0073
ALA 59ILE 60 0.0001
ILE 60LEU 61 -0.0203
LEU 61LYS 62 0.0001
LYS 62GLY 63 0.0088
GLY 63GLY 64 -0.0002
GLY 64HIS 65 0.0484
HIS 65TYR 66 0.0002
TYR 66ASP 67 0.0051
ASP 67ASN 68 0.0001
ASN 68GLN 69 0.0056
GLN 69LEU 70 0.0002
LEU 70GLN 71 0.0051
GLN 71ASN 72 -0.0001
ASN 72GLY 73 -0.0090
GLY 73ILE 74 0.0002
ILE 74LYS 75 -0.0081
LYS 75ARG 76 0.0001
ARG 76VAL 77 0.0189
VAL 77LYS 78 0.0002
LYS 78GLU 79 -0.0065
GLU 79PHE 80 -0.0000
PHE 80LEU 81 -0.0080
LEU 81GLU 82 -0.0000
GLU 82SER 83 -0.0009
SER 83SER 84 0.0001
SER 84PRO 85 -0.0011
PRO 85ASN 86 0.0000
ASN 86THR 87 -0.0166
THR 87GLN 88 0.0001
GLN 88TRP 89 -0.0032
TRP 89GLU 90 0.0001
GLU 90LEU 91 0.0090
LEU 91ARG 92 0.0001
ARG 92ALA 93 0.0119
ALA 93PHE 94 -0.0003
PHE 94MET 95 0.0118
MET 95ALA 96 0.0002
ALA 96VAL 97 -0.0142
VAL 97MET 98 -0.0000
MET 98HIS 99 0.0242
HIS 99PHE 100 -0.0001
PHE 100SER 101 -0.0215
SER 101LEU 102 0.0001
LEU 102THR 103 0.0492
THR 103ALA 104 0.0002
ALA 104ASP 105 0.1207
ASP 105ARG 106 -0.0001
ARG 106ILE 107 -0.0644
ILE 107ASP 108 0.0000
ASP 108ASP 109 0.0372
ASP 109ASP 110 -0.0000
ASP 110ILE 111 -0.0105
ILE 111LEU 112 -0.0001
LEU 112LYS 113 -0.0065
LYS 113VAL 114 -0.0001
VAL 114ILE 115 0.0064
ILE 115VAL 116 0.0001
VAL 116ASP 117 0.0051
ASP 117SER 118 0.0001
SER 118MET 119 -0.0282
MET 119ASN 120 0.0001
ASN 120HIS 121 0.0094
HIS 121HIS 122 -0.0002
HIS 122GLY 123 -0.0216
GLY 123ASP 124 0.0000
ASP 124ALA 125 0.0185
ALA 125ARG 126 -0.0001
ARG 126SER 127 -0.0477
SER 127LYS 128 0.0001
LYS 128LEU 129 -0.0238
LEU 129ARG 130 -0.0003
ARG 130GLU 131 -0.0456
GLU 131GLU 132 0.0000
GLU 132LEU 133 0.0299
LEU 133ALA 134 -0.0002
ALA 134GLU 135 0.0355
GLU 135LEU 136 0.0003
LEU 136THR 137 0.0184
THR 137ALA 138 0.0000
ALA 138GLU 139 0.0113
GLU 139LEU 140 -0.0001
LEU 140LYS 141 0.0707
LYS 141ILE 142 0.0001
ILE 142TYR 143 0.0206
TYR 143SER 144 -0.0002
SER 144VAL 145 0.0773
VAL 145ILE 146 0.0000
ILE 146GLN 147 0.0051
GLN 147ALA 148 -0.0001
ALA 148GLU 149 0.0202
GLU 149ILE 150 -0.0000
ILE 150ASN 151 -0.0015
ASN 151LYS 152 0.0001
LYS 152HIS 153 0.0045
HIS 153LEU 154 -0.0001
LEU 154SER 155 0.0090
SER 155SER 156 -0.0002
SER 156SER 157 0.0006
SER 157GLY 158 0.0002
GLY 158THR 159 -0.0080
THR 159ILE 160 -0.0002
ILE 160ASN 161 0.0278
ASN 161ILE 162 -0.0000
ILE 162HIS 163 0.0092
HIS 163ASP 164 0.0003
ASP 164LYS 165 0.0048
LYS 165SER 166 0.0001
SER 166ILE 167 -0.0266
ILE 167ASN 168 0.0001
ASN 168LEU 169 -0.0061
LEU 169MET 170 -0.0003
MET 170ASP 171 0.0134
ASP 171LYS 172 0.0000
LYS 172ASN 173 -0.0034
ASN 173LEU 174 0.0003
LEU 174TYR 175 -0.0109
TYR 175GLY 176 0.0003
GLY 176TYR 177 -0.0011
TYR 177THR 178 -0.0001
THR 178ASP 179 0.0010
ASP 179GLU 180 0.0005
GLU 180GLU 181 0.0015
GLU 181ILE 182 0.0002
ILE 182PHE 183 0.0015
PHE 183LYS 184 -0.0001
LYS 184ALA 185 -0.0039
ALA 185SER 186 0.0005
SER 186ALA 187 -0.0781
ALA 187GLU 188 0.0001
GLU 188TYR 189 -0.0026
TYR 189LYS 190 0.0002
LYS 190ILE 191 0.0650
ILE 191LEU 192 0.0002
LEU 192GLU 193 -0.0205
GLU 193LYS 194 0.0002
LYS 194MET 195 -0.0139
MET 195PRO 196 -0.0000
PRO 196GLN 197 -0.0389
GLN 197THR 198 -0.0000
THR 198THR 199 -0.0217
THR 199ILE 200 0.0000
ILE 200GLN 201 0.0519
GLN 201VAL 202 0.0000
VAL 202ASP 203 0.0095
ASP 203GLY 204 0.0001
GLY 204SER 205 -0.0303
SER 205GLU 206 -0.0001
GLU 206LYS 207 -0.0184
LYS 207LYS 208 0.0002
LYS 208ILE 209 -0.0022
ILE 209VAL 210 -0.0001
VAL 210SER 211 -0.0190
SER 211ILE 212 0.0003
ILE 212LYS 213 -0.0063
LYS 213ASP 214 -0.0004
ASP 214PHE 215 -0.0010
PHE 215LEU 216 -0.0001
LEU 216GLY 217 0.0033
GLY 217SER 218 -0.0001
SER 218GLU 219 -0.0124
GLU 219ASN 220 -0.0001
ASN 220LYS 221 -0.0578
LYS 221ARG 222 -0.0001
ARG 222THR 223 0.0282
THR 223GLY 224 0.0004
GLY 224ALA 225 0.0158
ALA 225LEU 226 0.0000
LEU 226GLY 227 0.0108
GLY 227ASN 228 0.0001
ASN 228LEU 229 -0.0060
LEU 229LYS 230 -0.0002
LYS 230ASN 231 0.0168
ASN 231SER 232 -0.0002
SER 232TYR 233 0.0131
TYR 233SER 234 0.0001
SER 234TYR 235 -0.0107
TYR 235ASN 236 0.0001
ASN 236LEU 237 0.0087
LEU 237ASN 238 0.0000
ASN 238ASP 239 -0.0004
ASP 239LEU 240 0.0004
LEU 240VAL 241 -0.0319
VAL 241SER 242 -0.0004
SER 242GLN 243 0.0036
GLN 243LYS 244 -0.0001
LYS 244THR 245 -0.0166
THR 245THR 246 0.0002
THR 246GLN 247 -0.0126
GLN 247LEU 248 0.0004
LEU 248SER 249 -0.0317
SER 249ASP 250 -0.0001
ASP 250ILE 251 -0.0451
ILE 251THR 252 -0.0003
THR 252SER 253 0.1220
SER 253ARG 254 -0.0004
ARG 254PHE 255 0.0291
PHE 255ASN 256 0.0000
ASN 256SER 257 0.0518
SER 257ALA 258 0.0006
ALA 258ILE 259 -0.0081
ILE 259GLU 260 -0.0003
GLU 260ALA 261 -0.0028
ALA 261LEU 262 0.0001
LEU 262ASN 263 0.0053
ASN 263ARG 264 -0.0003
ARG 264PHE 265 0.0355
PHE 265ILE 266 0.0002
ILE 266GLN 267 -0.0184
GLN 267LYS 268 0.0001
LYS 268TYR 269 0.0048
TYR 269ASP 270 -0.0003
ASP 270SER 271 -0.0270
SER 271VAL 272 -0.0000
VAL 272MET 273 0.0057
MET 273GLN 274 0.0004
GLN 274ARG 275 -0.0037
ARG 275LEU 276 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.