CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 -0.0000
PRO 2GLY 3 0.3397
GLY 3LEU 4 -0.0000
LEU 4PRO 5 -0.3591
PRO 5VAL 6 -0.0003
VAL 6GLU 7 -0.3025
GLU 7TYR 8 0.0001
TYR 8LEU 9 -0.1297
LEU 9GLN 10 0.0003
GLN 10VAL 11 -0.0326
VAL 11PRO 12 0.0005
PRO 12SER 13 -0.1318
SER 13ALA 14 -0.0000
ALA 14SER 15 -0.1591
SER 15MET 16 0.0000
MET 16GLY 17 -0.0703
GLY 17ARG 18 -0.0003
ARG 18ASP 19 -0.1297
ASP 19ILE 20 -0.0002
ILE 20LYS 21 -0.1585
LYS 21VAL 22 -0.0003
VAL 22GLN 23 -0.0967
GLN 23PHE 24 -0.0001
PHE 24GLN 25 -0.1358
GLN 25GLY 26 -0.0002
GLY 26GLY 27 0.0177
GLY 27GLY 28 -0.0000
GLY 28PRO 29 -0.0852
PRO 29HIS 30 0.0000
HIS 30ALA 31 0.0619
ALA 31VAL 32 0.0003
VAL 32TYR 33 0.0006
TYR 33LEU 34 0.0001
LEU 34LEU 35 -0.0068
LEU 35ASP 36 0.0004
ASP 36GLY 37 0.0805
GLY 37LEU 38 0.0002
LEU 38ARG 39 -0.0453
ARG 39ALA 40 0.0001
ALA 40GLN 41 -0.0120
GLN 41ASP 42 -0.0002
ASP 42ASP 43 -0.0553
ASP 43TYR 44 -0.0002
TYR 44ASN 45 -0.0253
ASN 45GLY 46 -0.0000
GLY 46TRP 47 -0.0657
TRP 47ASP 48 0.0001
ASP 48ILE 49 0.0001
ILE 49ASN 50 -0.0001
ASN 50THR 51 0.0064
THR 51PRO 52 0.0002
PRO 52ALA 53 0.0944
ALA 53PHE 54 -0.0002
PHE 54GLU 55 -0.0291
GLU 55GLU 56 0.0000
GLU 56TYR 57 -0.1198
TYR 57TYR 58 0.0004
TYR 58GLN 59 0.0377
GLN 59SER 60 -0.0002
SER 60GLY 61 -0.0257
GLY 61LEU 62 0.0002
LEU 62SER 63 0.0344
SER 63VAL 64 -0.0000
VAL 64ILE 65 -0.0399
ILE 65MET 66 0.0003
MET 66PRO 67 -0.0570
PRO 67VAL 68 -0.0003
VAL 68GLY 69 -0.0828
GLY 69GLY 70 -0.0001
GLY 70GLN 71 0.0394
GLN 71SER 72 0.0002
SER 72SER 73 0.0067
SER 73PHE 74 0.0000
PHE 74TYR 75 -0.0007
TYR 75THR 76 0.0002
THR 76ASP 77 0.0628
ASP 77TRP 78 -0.0002
TRP 78TYR 79 -0.0263
TYR 79GLN 80 0.0002
GLN 80PRO 81 0.0274
PRO 81SER 82 -0.0001
SER 82GLN 83 -0.0236
GLN 83SER 84 -0.0003
SER 84ASN 85 0.0124
ASN 85GLY 86 0.0001
GLY 86GLN 87 0.0267
GLN 87ASN 88 0.0001
ASN 88TYR 89 0.0709
TYR 89THR 90 0.0001
THR 90TYR 91 0.0401
TYR 91LYS 92 0.0000
LYS 92TRP 93 -0.0026
TRP 93GLU 94 -0.0004
GLU 94THR 95 -0.0251
THR 95PHE 96 -0.0003
PHE 96LEU 97 0.0744
LEU 97THR 98 -0.0002
THR 98ARG 99 0.0234
ARG 99GLU 100 -0.0001
GLU 100MET 101 -0.0122
MET 101PRO 102 0.0004
PRO 102ALA 103 0.0529
ALA 103TRP 104 -0.0003
TRP 104LEU 105 -0.0013
LEU 105GLN 106 0.0001
GLN 106ALA 107 0.0075
ALA 107ASN 108 -0.0000
ASN 108LYS 109 0.0175
LYS 109GLY 110 -0.0002
GLY 110VAL 111 0.0161
VAL 111SER 112 -0.0003
SER 112PRO 113 -0.0542
PRO 113THR 114 -0.0001
THR 114GLY 115 0.0418
GLY 115ASN 116 -0.0001
ASN 116ALA 117 0.0349
ALA 117ALA 118 0.0001
ALA 118VAL 119 0.0174
VAL 119GLY 120 0.0005
GLY 120LEU 121 0.0335
LEU 121SER 122 -0.0004
SER 122MET 123 0.1290
MET 123SER 124 0.0001
SER 124GLY 125 -0.0515
GLY 125GLY 126 -0.0005
GLY 126SER 127 -0.0358
SER 127ALA 128 0.0002
ALA 128LEU 129 -0.0059
LEU 129ILE 130 0.0002
ILE 130LEU 131 -0.1248
LEU 131ALA 132 -0.0000
ALA 132ALA 133 -0.0065
ALA 133TYR 134 -0.0001
TYR 134TYR 135 -0.1853
TYR 135PRO 136 -0.0002
PRO 136GLN 137 -0.0619
GLN 137GLN 138 -0.0001
GLN 138PHE 139 0.0226
PHE 139PRO 140 0.0001
PRO 140TYR 141 -0.0295
TYR 141ALA 142 0.0005
ALA 142ALA 143 -0.0185
ALA 143SER 144 0.0004
SER 144LEU 145 0.0251
LEU 145SER 146 0.0003
SER 146GLY 147 0.1882
GLY 147PHE 148 0.0000
PHE 148LEU 149 0.0506
LEU 149ASN 150 -0.0003
ASN 150PRO 151 -0.0569
PRO 151SER 152 -0.0002
SER 152GLU 153 -0.0676
GLU 153SER 154 0.0001
SER 154TRP 155 -0.0516
TRP 155TRP 156 -0.0002
TRP 156PRO 157 0.0370
PRO 157THR 158 0.0002
THR 158LEU 159 0.1167
LEU 159ILE 160 0.0002
ILE 160GLY 161 -0.0579
GLY 161LEU 162 0.0000
LEU 162ALA 163 0.1475
ALA 163MET 164 -0.0001
MET 164ASN 165 0.0122
ASN 165ASP 166 -0.0001
ASP 166SER 167 0.0161
SER 167GLY 168 0.0004
GLY 168GLY 169 -0.0188
GLY 169TYR 170 0.0000
TYR 170ASN 171 0.0513
ASN 171ALA 172 0.0000
ALA 172ASN 173 0.0263
ASN 173SER 174 0.0003
SER 174MET 175 0.0510
MET 175TRP 176 0.0002
TRP 176GLY 177 -0.0749
GLY 177PRO 178 -0.0003
PRO 178SER 179 0.0351
SER 179SER 180 0.0000
SER 180ASP 181 -0.0467
ASP 181PRO 182 -0.0000
PRO 182ALA 183 -0.0673
ALA 183TRP 184 -0.0002
TRP 184LYS 185 -0.0027
LYS 185ARG 186 0.0000
ARG 186ASN 187 0.0598
ASN 187ASP 188 0.0003
ASP 188PRO 189 -0.0016
PRO 189MET 190 0.0000
MET 190VAL 191 0.0590
VAL 191GLN 192 -0.0001
GLN 192ILE 193 0.0196
ILE 193PRO 194 -0.0003
PRO 194ARG 195 -0.0168
ARG 195LEU 196 0.0004
LEU 196VAL 197 0.0222
VAL 197ALA 198 0.0000
ALA 198ASN 199 -0.0039
ASN 199ASN 200 0.0000
ASN 200THR 201 -0.0019
THR 201ARG 202 0.0002
ARG 202ILE 203 -0.0198
ILE 203TRP 204 -0.0000
TRP 204VAL 205 0.0301
VAL 205TYR 206 0.0000
TYR 206CYS 207 0.0036
CYS 207GLY 208 -0.0004
GLY 208ASN 209 -0.0304
ASN 209GLY 210 -0.0001
GLY 210THR 211 0.0280
THR 211PRO 212 0.0000
PRO 212SER 213 0.0036
SER 213ASP 214 0.0002
ASP 214LEU 215 0.1074
LEU 215GLY 216 -0.0000
GLY 216GLY 217 0.0132
GLY 217ASP 218 0.0000
ASP 218ASN 219 -0.0332
ASN 219ILE 220 -0.0004
ILE 220PRO 221 0.0443
PRO 221ALA 222 0.0001
ALA 222LYS 223 0.0093
LYS 223PHE 224 0.0001
PHE 224LEU 225 0.0031
LEU 225GLU 226 -0.0001
GLU 226GLY 227 -0.0199
GLY 227LEU 228 0.0002
LEU 228THR 229 -0.0721
THR 229LEU 230 0.0002
LEU 230ARG 231 0.0166
ARG 231THR 232 0.0002
THR 232ASN 233 0.0647
ASN 233GLN 234 -0.0002
GLN 234THR 235 -0.0151
THR 235PHE 236 0.0004
PHE 236ARG 237 0.0047
ARG 237ASP 238 -0.0003
ASP 238THR 239 -0.0374
THR 239TYR 240 0.0001
TYR 240ALA 241 0.0055
ALA 241ALA 242 0.0001
ALA 242ASP 243 -0.0179
ASP 243GLY 244 -0.0001
GLY 244GLY 245 -0.0318
GLY 245ARG 246 -0.0001
ARG 246ASN 247 0.0758
ASN 247GLY 248 -0.0002
GLY 248VAL 249 -0.1907
VAL 249PHE 250 -0.0003
PHE 250ASN 251 -0.2242
ASN 251PHE 252 -0.0001
PHE 252PRO 253 -0.2359
PRO 253PRO 254 0.0001
PRO 254ASN 255 0.0375
ASN 255GLY 256 -0.0002
GLY 256THR 257 0.0023
THR 257HIS 258 -0.0004
HIS 258SER 259 0.1140
SER 259TRP 260 0.0002
TRP 260PRO 261 0.1663
PRO 261TYR 262 -0.0004
TYR 262TRP 263 0.0193
TRP 263ASN 264 -0.0002
ASN 264GLU 265 0.1790
GLU 265GLN 266 0.0001
GLN 266LEU 267 0.1101
LEU 267VAL 268 -0.0003
VAL 268ALA 269 0.1046
ALA 269MET 270 0.0002
MET 270LYS 271 0.1137
LYS 271ALA 272 -0.0003
ALA 272ASP 273 0.1010
ASP 273ILE 274 0.0001
ILE 274GLN 275 0.0401
GLN 275HIS 276 -0.0002
HIS 276VAL 277 0.0464
VAL 277LEU 278 -0.0004
LEU 278ASN 279 0.0083
ASN 279GLY 280 -0.0001

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.