CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 0.0000
PRO 2GLY 3 -0.5304
GLY 3LEU 4 0.0001
LEU 4PRO 5 -0.2548
PRO 5VAL 6 -0.0001
VAL 6GLU 7 -0.0961
GLU 7TYR 8 0.0000
TYR 8LEU 9 -0.0611
LEU 9GLN 10 0.0000
GLN 10VAL 11 -0.0661
VAL 11PRO 12 -0.0003
PRO 12SER 13 -0.0903
SER 13ALA 14 0.0003
ALA 14SER 15 -0.0967
SER 15MET 16 0.0002
MET 16GLY 17 0.0408
GLY 17ARG 18 -0.0003
ARG 18ASP 19 -0.0157
ASP 19ILE 20 0.0002
ILE 20LYS 21 -0.0439
LYS 21VAL 22 -0.0002
VAL 22GLN 23 -0.0677
GLN 23PHE 24 0.0000
PHE 24GLN 25 0.0542
GLN 25GLY 26 0.0003
GLY 26GLY 27 0.0847
GLY 27GLY 28 -0.0003
GLY 28PRO 29 -0.1460
PRO 29HIS 30 -0.0000
HIS 30ALA 31 0.1839
ALA 31VAL 32 0.0003
VAL 32TYR 33 0.0297
TYR 33LEU 34 0.0001
LEU 34LEU 35 0.0823
LEU 35ASP 36 -0.0002
ASP 36GLY 37 0.2194
GLY 37LEU 38 0.0003
LEU 38ARG 39 0.0568
ARG 39ALA 40 0.0000
ALA 40GLN 41 -0.0378
GLN 41ASP 42 -0.0001
ASP 42ASP 43 0.1818
ASP 43TYR 44 0.0002
TYR 44ASN 45 -0.1019
ASN 45GLY 46 0.0003
GLY 46TRP 47 -0.0380
TRP 47ASP 48 -0.0001
ASP 48ILE 49 0.0768
ILE 49ASN 50 0.0002
ASN 50THR 51 0.0435
THR 51PRO 52 -0.0003
PRO 52ALA 53 -0.1704
ALA 53PHE 54 0.0004
PHE 54GLU 55 -0.0595
GLU 55GLU 56 0.0001
GLU 56TYR 57 0.1776
TYR 57TYR 58 0.0005
TYR 58GLN 59 -0.0546
GLN 59SER 60 0.0001
SER 60GLY 61 -0.0040
GLY 61LEU 62 0.0002
LEU 62SER 63 0.0325
SER 63VAL 64 0.0004
VAL 64ILE 65 0.0379
ILE 65MET 66 0.0005
MET 66PRO 67 0.0099
PRO 67VAL 68 -0.0001
VAL 68GLY 69 0.2070
GLY 69GLY 70 -0.0003
GLY 70GLN 71 0.0258
GLN 71SER 72 -0.0000
SER 72SER 73 -0.0544
SER 73PHE 74 -0.0002
PHE 74TYR 75 0.0031
TYR 75THR 76 0.0002
THR 76ASP 77 0.0642
ASP 77TRP 78 -0.0000
TRP 78TYR 79 -0.0703
TYR 79GLN 80 -0.0002
GLN 80PRO 81 0.0347
PRO 81SER 82 -0.0000
SER 82GLN 83 0.0164
GLN 83SER 84 -0.0002
SER 84ASN 85 -0.0048
ASN 85GLY 86 -0.0003
GLY 86GLN 87 0.0432
GLN 87ASN 88 -0.0002
ASN 88TYR 89 -0.0234
TYR 89THR 90 0.0003
THR 90TYR 91 -0.0125
TYR 91LYS 92 -0.0000
LYS 92TRP 93 -0.0179
TRP 93GLU 94 0.0001
GLU 94THR 95 0.0598
THR 95PHE 96 0.0001
PHE 96LEU 97 0.0258
LEU 97THR 98 -0.0001
THR 98ARG 99 0.0565
ARG 99GLU 100 -0.0002
GLU 100MET 101 -0.0434
MET 101PRO 102 0.0000
PRO 102ALA 103 0.0925
ALA 103TRP 104 -0.0000
TRP 104LEU 105 0.0023
LEU 105GLN 106 0.0002
GLN 106ALA 107 0.0195
ALA 107ASN 108 0.0000
ASN 108LYS 109 0.0286
LYS 109GLY 110 -0.0002
GLY 110VAL 111 -0.0042
VAL 111SER 112 -0.0002
SER 112PRO 113 -0.0867
PRO 113THR 114 -0.0001
THR 114GLY 115 0.1009
GLY 115ASN 116 0.0003
ASN 116ALA 117 0.0994
ALA 117ALA 118 -0.0001
ALA 118VAL 119 0.0863
VAL 119GLY 120 -0.0004
GLY 120LEU 121 0.1108
LEU 121SER 122 -0.0003
SER 122MET 123 0.1542
MET 123SER 124 -0.0003
SER 124GLY 125 -0.0324
GLY 125GLY 126 -0.0000
GLY 126SER 127 -0.0161
SER 127ALA 128 -0.0002
ALA 128LEU 129 -0.0175
LEU 129ILE 130 0.0001
ILE 130LEU 131 -0.1460
LEU 131ALA 132 -0.0002
ALA 132ALA 133 -0.0929
ALA 133TYR 134 0.0005
TYR 134TYR 135 -0.2618
TYR 135PRO 136 0.0001
PRO 136GLN 137 -0.1654
GLN 137GLN 138 -0.0001
GLN 138PHE 139 0.0630
PHE 139PRO 140 -0.0002
PRO 140TYR 141 0.0499
TYR 141ALA 142 0.0001
ALA 142ALA 143 0.0252
ALA 143SER 144 -0.0003
SER 144LEU 145 0.0184
LEU 145SER 146 0.0003
SER 146GLY 147 0.0935
GLY 147PHE 148 0.0002
PHE 148LEU 149 0.1186
LEU 149ASN 150 -0.0003
ASN 150PRO 151 0.0160
PRO 151SER 152 -0.0002
SER 152GLU 153 -0.0490
GLU 153SER 154 -0.0001
SER 154TRP 155 -0.0276
TRP 155TRP 156 -0.0002
TRP 156PRO 157 0.1128
PRO 157THR 158 0.0000
THR 158LEU 159 0.1286
LEU 159ILE 160 -0.0001
ILE 160GLY 161 0.0059
GLY 161LEU 162 0.0003
LEU 162ALA 163 0.1468
ALA 163MET 164 -0.0003
MET 164ASN 165 -0.0046
ASN 165ASP 166 -0.0001
ASP 166SER 167 0.0705
SER 167GLY 168 -0.0002
GLY 168GLY 169 0.0409
GLY 169TYR 170 -0.0002
TYR 170ASN 171 0.1101
ASN 171ALA 172 -0.0002
ALA 172ASN 173 0.0777
ASN 173SER 174 -0.0003
SER 174MET 175 0.0048
MET 175TRP 176 -0.0003
TRP 176GLY 177 -0.0507
GLY 177PRO 178 0.0001
PRO 178SER 179 0.0743
SER 179SER 180 -0.0001
SER 180ASP 181 0.0010
ASP 181PRO 182 0.0001
PRO 182ALA 183 -0.0198
ALA 183TRP 184 0.0001
TRP 184LYS 185 -0.0311
LYS 185ARG 186 -0.0003
ARG 186ASN 187 0.0849
ASN 187ASP 188 0.0002
ASP 188PRO 189 -0.0302
PRO 189MET 190 -0.0003
MET 190VAL 191 0.0158
VAL 191GLN 192 -0.0001
GLN 192ILE 193 0.0139
ILE 193PRO 194 -0.0002
PRO 194ARG 195 -0.0189
ARG 195LEU 196 -0.0001
LEU 196VAL 197 0.0460
VAL 197ALA 198 -0.0000
ALA 198ASN 199 -0.0362
ASN 199ASN 200 -0.0000
ASN 200THR 201 -0.0027
THR 201ARG 202 -0.0004
ARG 202ILE 203 -0.0698
ILE 203TRP 204 0.0001
TRP 204VAL 205 -0.0849
VAL 205TYR 206 0.0001
TYR 206CYS 207 -0.1179
CYS 207GLY 208 0.0003
GLY 208ASN 209 -0.0898
ASN 209GLY 210 0.0000
GLY 210THR 211 0.0578
THR 211PRO 212 0.0005
PRO 212SER 213 -0.0793
SER 213ASP 214 0.0002
ASP 214LEU 215 0.0851
LEU 215GLY 216 -0.0003
GLY 216GLY 217 -0.0067
GLY 217ASP 218 -0.0002
ASP 218ASN 219 -0.0863
ASN 219ILE 220 -0.0002
ILE 220PRO 221 0.1078
PRO 221ALA 222 0.0000
ALA 222LYS 223 0.0990
LYS 223PHE 224 0.0000
PHE 224LEU 225 0.1193
LEU 225GLU 226 0.0002
GLU 226GLY 227 0.1166
GLY 227LEU 228 0.0002
LEU 228THR 229 -0.1138
THR 229LEU 230 0.0002
LEU 230ARG 231 0.0843
ARG 231THR 232 -0.0001
THR 232ASN 233 0.0467
ASN 233GLN 234 -0.0000
GLN 234THR 235 0.0310
THR 235PHE 236 -0.0000
PHE 236ARG 237 0.0274
ARG 237ASP 238 0.0000
ASP 238THR 239 -0.0114
THR 239TYR 240 -0.0000
TYR 240ALA 241 0.0268
ALA 241ALA 242 -0.0003
ALA 242ASP 243 -0.0018
ASP 243GLY 244 0.0001
GLY 244GLY 245 -0.0563
GLY 245ARG 246 -0.0003
ARG 246ASN 247 -0.0859
ASN 247GLY 248 0.0001
GLY 248VAL 249 -0.0653
VAL 249PHE 250 0.0003
PHE 250ASN 251 -0.1864
ASN 251PHE 252 0.0001
PHE 252PRO 253 -0.1304
PRO 253PRO 254 -0.0003
PRO 254ASN 255 0.0824
ASN 255GLY 256 -0.0001
GLY 256THR 257 0.0767
THR 257HIS 258 0.0002
HIS 258SER 259 0.4244
SER 259TRP 260 0.0003
TRP 260PRO 261 -0.0031
PRO 261TYR 262 -0.0002
TYR 262TRP 263 0.0193
TRP 263ASN 264 0.0001
ASN 264GLU 265 0.0004
GLU 265GLN 266 -0.0001
GLN 266LEU 267 0.0180
LEU 267VAL 268 0.0000
VAL 268ALA 269 0.0046
ALA 269MET 270 0.0000
MET 270LYS 271 -0.0733
LYS 271ALA 272 0.0001
ALA 272ASP 273 -0.1499
ASP 273ILE 274 -0.0000
ILE 274GLN 275 -0.0766
GLN 275HIS 276 -0.0003
HIS 276VAL 277 -0.1063
VAL 277LEU 278 0.0000
LEU 278ASN 279 -0.1620
ASN 279GLY 280 0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.