CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 0.0000
PRO 2GLY 3 -0.2659
GLY 3LEU 4 -0.0001
LEU 4PRO 5 0.2567
PRO 5VAL 6 -0.0001
VAL 6GLU 7 0.1684
GLU 7TYR 8 0.0001
TYR 8LEU 9 0.0532
LEU 9GLN 10 -0.0000
GLN 10VAL 11 0.0205
VAL 11PRO 12 -0.0001
PRO 12SER 13 0.0363
SER 13ALA 14 0.0001
ALA 14SER 15 -0.1190
SER 15MET 16 0.0001
MET 16GLY 17 -0.1567
GLY 17ARG 18 -0.0002
ARG 18ASP 19 -0.0497
ASP 19ILE 20 0.0001
ILE 20LYS 21 -0.1727
LYS 21VAL 22 0.0001
VAL 22GLN 23 0.0299
GLN 23PHE 24 -0.0004
PHE 24GLN 25 -0.0457
GLN 25GLY 26 -0.0003
GLY 26GLY 27 -0.0400
GLY 27GLY 28 0.0000
GLY 28PRO 29 0.0499
PRO 29HIS 30 0.0001
HIS 30ALA 31 -0.0827
ALA 31VAL 32 0.0001
VAL 32TYR 33 -0.0299
TYR 33LEU 34 0.0001
LEU 34LEU 35 -0.0988
LEU 35ASP 36 0.0003
ASP 36GLY 37 -0.1994
GLY 37LEU 38 -0.0001
LEU 38ARG 39 -0.0308
ARG 39ALA 40 -0.0003
ALA 40GLN 41 0.0829
GLN 41ASP 42 -0.0001
ASP 42ASP 43 -0.1798
ASP 43TYR 44 0.0002
TYR 44ASN 45 0.0708
ASN 45GLY 46 0.0000
GLY 46TRP 47 -0.0554
TRP 47ASP 48 0.0003
ASP 48ILE 49 -0.0179
ILE 49ASN 50 0.0003
ASN 50THR 51 -0.1042
THR 51PRO 52 0.0003
PRO 52ALA 53 -0.0045
ALA 53PHE 54 0.0003
PHE 54GLU 55 0.0111
GLU 55GLU 56 -0.0002
GLU 56TYR 57 -0.0750
TYR 57TYR 58 0.0002
TYR 58GLN 59 -0.0666
GLN 59SER 60 -0.0001
SER 60GLY 61 -0.0413
GLY 61LEU 62 -0.0000
LEU 62SER 63 0.0025
SER 63VAL 64 0.0002
VAL 64ILE 65 -0.0417
ILE 65MET 66 0.0003
MET 66PRO 67 -0.0534
PRO 67VAL 68 0.0001
VAL 68GLY 69 -0.1459
GLY 69GLY 70 -0.0001
GLY 70GLN 71 0.1760
GLN 71SER 72 0.0001
SER 72SER 73 0.0671
SER 73PHE 74 -0.0000
PHE 74TYR 75 0.0577
TYR 75THR 76 -0.0002
THR 76ASP 77 0.0113
ASP 77TRP 78 0.0001
TRP 78TYR 79 0.0254
TYR 79GLN 80 0.0001
GLN 80PRO 81 0.0255
PRO 81SER 82 -0.0001
SER 82GLN 83 -0.0392
GLN 83SER 84 0.0003
SER 84ASN 85 0.0097
ASN 85GLY 86 -0.0001
GLY 86GLN 87 0.0663
GLN 87ASN 88 -0.0000
ASN 88TYR 89 0.2294
TYR 89THR 90 -0.0001
THR 90TYR 91 0.0460
TYR 91LYS 92 0.0003
LYS 92TRP 93 0.0108
TRP 93GLU 94 0.0003
GLU 94THR 95 -0.1606
THR 95PHE 96 0.0002
PHE 96LEU 97 0.0649
LEU 97THR 98 -0.0003
THR 98ARG 99 -0.0510
ARG 99GLU 100 0.0002
GLU 100MET 101 0.0783
MET 101PRO 102 -0.0001
PRO 102ALA 103 -0.0839
ALA 103TRP 104 0.0000
TRP 104LEU 105 0.0301
LEU 105GLN 106 -0.0000
GLN 106ALA 107 -0.0738
ALA 107ASN 108 -0.0001
ASN 108LYS 109 0.0243
LYS 109GLY 110 -0.0001
GLY 110VAL 111 -0.0369
VAL 111SER 112 0.0002
SER 112PRO 113 0.0652
PRO 113THR 114 -0.0002
THR 114GLY 115 -0.0761
GLY 115ASN 116 0.0002
ASN 116ALA 117 -0.0976
ALA 117ALA 118 0.0002
ALA 118VAL 119 -0.0512
VAL 119GLY 120 0.0003
GLY 120LEU 121 0.0083
LEU 121SER 122 0.0002
SER 122MET 123 0.0215
MET 123SER 124 0.0002
SER 124GLY 125 -0.1172
GLY 125GLY 126 -0.0001
GLY 126SER 127 -0.0100
SER 127ALA 128 -0.0001
ALA 128LEU 129 -0.0083
LEU 129ILE 130 0.0001
ILE 130LEU 131 -0.0600
LEU 131ALA 132 0.0002
ALA 132ALA 133 0.0813
ALA 133TYR 134 -0.0002
TYR 134TYR 135 -0.0512
TYR 135PRO 136 -0.0002
PRO 136GLN 137 0.0175
GLN 137GLN 138 -0.0004
GLN 138PHE 139 -0.0584
PHE 139PRO 140 -0.0002
PRO 140TYR 141 -0.1142
TYR 141ALA 142 0.0004
ALA 142ALA 143 -0.0652
ALA 143SER 144 0.0002
SER 144LEU 145 0.0603
LEU 145SER 146 -0.0002
SER 146GLY 147 0.1780
GLY 147PHE 148 0.0002
PHE 148LEU 149 0.0318
LEU 149ASN 150 -0.0000
ASN 150PRO 151 -0.1376
PRO 151SER 152 -0.0001
SER 152GLU 153 -0.0672
GLU 153SER 154 0.0000
SER 154TRP 155 -0.0798
TRP 155TRP 156 0.0000
TRP 156PRO 157 -0.0077
PRO 157THR 158 0.0002
THR 158LEU 159 0.0596
LEU 159ILE 160 0.0000
ILE 160GLY 161 -0.1371
GLY 161LEU 162 -0.0001
LEU 162ALA 163 0.1231
ALA 163MET 164 0.0002
MET 164ASN 165 -0.0077
ASN 165ASP 166 0.0000
ASP 166SER 167 -0.0598
SER 167GLY 168 -0.0001
GLY 168GLY 169 -0.1862
GLY 169TYR 170 0.0003
TYR 170ASN 171 -0.0655
ASN 171ALA 172 -0.0000
ALA 172ASN 173 -0.0373
ASN 173SER 174 0.0002
SER 174MET 175 0.0692
MET 175TRP 176 -0.0000
TRP 176GLY 177 -0.0738
GLY 177PRO 178 -0.0004
PRO 178SER 179 -0.0109
SER 179SER 180 0.0001
SER 180ASP 181 -0.0949
ASP 181PRO 182 0.0001
PRO 182ALA 183 -0.1144
ALA 183TRP 184 -0.0000
TRP 184LYS 185 0.0242
LYS 185ARG 186 0.0001
ARG 186ASN 187 0.0326
ASN 187ASP 188 0.0002
ASP 188PRO 189 0.0039
PRO 189MET 190 -0.0001
MET 190VAL 191 0.1497
VAL 191GLN 192 0.0001
GLN 192ILE 193 0.0440
ILE 193PRO 194 -0.0001
PRO 194ARG 195 -0.0100
ARG 195LEU 196 0.0004
LEU 196VAL 197 -0.0027
VAL 197ALA 198 -0.0003
ALA 198ASN 199 0.0108
ASN 199ASN 200 0.0001
ASN 200THR 201 0.0096
THR 201ARG 202 0.0001
ARG 202ILE 203 -0.0116
ILE 203TRP 204 -0.0001
TRP 204VAL 205 0.0313
VAL 205TYR 206 -0.0000
TYR 206CYS 207 0.0159
CYS 207GLY 208 0.0002
GLY 208ASN 209 -0.0756
ASN 209GLY 210 0.0002
GLY 210THR 211 0.1317
THR 211PRO 212 0.0000
PRO 212SER 213 0.1377
SER 213ASP 214 0.0004
ASP 214LEU 215 -0.0561
LEU 215GLY 216 0.0001
GLY 216GLY 217 -0.0315
GLY 217ASP 218 -0.0004
ASP 218ASN 219 -0.0436
ASN 219ILE 220 0.0001
ILE 220PRO 221 0.0411
PRO 221ALA 222 -0.0000
ALA 222LYS 223 -0.0690
LYS 223PHE 224 -0.0001
PHE 224LEU 225 0.0305
LEU 225GLU 226 0.0004
GLU 226GLY 227 -0.1372
GLY 227LEU 228 -0.0001
LEU 228THR 229 -0.0954
THR 229LEU 230 0.0003
LEU 230ARG 231 -0.0061
ARG 231THR 232 -0.0001
THR 232ASN 233 0.0017
ASN 233GLN 234 0.0002
GLN 234THR 235 -0.0108
THR 235PHE 236 0.0005
PHE 236ARG 237 -0.0306
ARG 237ASP 238 0.0001
ASP 238THR 239 -0.0099
THR 239TYR 240 -0.0000
TYR 240ALA 241 -0.0197
ALA 241ALA 242 0.0002
ALA 242ASP 243 -0.0324
ASP 243GLY 244 0.0002
GLY 244GLY 245 -0.0027
GLY 245ARG 246 0.0001
ARG 246ASN 247 0.1577
ASN 247GLY 248 -0.0001
GLY 248VAL 249 -0.2370
VAL 249PHE 250 0.0001
PHE 250ASN 251 -0.2346
ASN 251PHE 252 -0.0001
PHE 252PRO 253 -0.1774
PRO 253PRO 254 0.0003
PRO 254ASN 255 0.0220
ASN 255GLY 256 -0.0001
GLY 256THR 257 0.0212
THR 257HIS 258 -0.0000
HIS 258SER 259 -0.1712
SER 259TRP 260 0.0003
TRP 260PRO 261 0.1116
PRO 261TYR 262 -0.0000
TYR 262TRP 263 -0.1515
TRP 263ASN 264 0.0002
ASN 264GLU 265 0.2030
GLU 265GLN 266 0.0001
GLN 266LEU 267 -0.0550
LEU 267VAL 268 0.0002
VAL 268ALA 269 0.1698
ALA 269MET 270 -0.0005
MET 270LYS 271 0.0643
LYS 271ALA 272 0.0002
ALA 272ASP 273 0.2516
ASP 273ILE 274 -0.0000
ILE 274GLN 275 0.0573
GLN 275HIS 276 -0.0001
HIS 276VAL 277 0.1654
VAL 277LEU 278 0.0003
LEU 278ASN 279 0.1748
ASN 279GLY 280 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.