CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 13  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 -0.0000
PRO 2GLY 3 0.5433
GLY 3LEU 4 0.0000
LEU 4PRO 5 0.0582
PRO 5VAL 6 0.0002
VAL 6GLU 7 -0.0579
GLU 7TYR 8 0.0002
TYR 8LEU 9 -0.1024
LEU 9GLN 10 -0.0002
GLN 10VAL 11 -0.0517
VAL 11PRO 12 -0.0000
PRO 12SER 13 0.1038
SER 13ALA 14 0.0002
ALA 14SER 15 0.0203
SER 15MET 16 0.0000
MET 16GLY 17 0.0621
GLY 17ARG 18 -0.0001
ARG 18ASP 19 0.0425
ASP 19ILE 20 0.0001
ILE 20LYS 21 -0.2336
LYS 21VAL 22 -0.0002
VAL 22GLN 23 -0.1274
GLN 23PHE 24 0.0003
PHE 24GLN 25 0.0739
GLN 25GLY 26 0.0001
GLY 26GLY 27 -0.0041
GLY 27GLY 28 -0.0002
GLY 28PRO 29 0.0690
PRO 29HIS 30 0.0000
HIS 30ALA 31 -0.0109
ALA 31VAL 32 0.0000
VAL 32TYR 33 0.0355
TYR 33LEU 34 0.0003
LEU 34LEU 35 0.0569
LEU 35ASP 36 -0.0001
ASP 36GLY 37 0.0472
GLY 37LEU 38 -0.0003
LEU 38ARG 39 0.0765
ARG 39ALA 40 0.0000
ALA 40GLN 41 0.0295
GLN 41ASP 42 0.0002
ASP 42ASP 43 0.0916
ASP 43TYR 44 0.0001
TYR 44ASN 45 -0.0005
ASN 45GLY 46 -0.0001
GLY 46TRP 47 0.0112
TRP 47ASP 48 -0.0001
ASP 48ILE 49 0.0167
ILE 49ASN 50 -0.0002
ASN 50THR 51 -0.0135
THR 51PRO 52 0.0001
PRO 52ALA 53 0.0666
ALA 53PHE 54 0.0000
PHE 54GLU 55 -0.0030
GLU 55GLU 56 0.0002
GLU 56TYR 57 -0.0330
TYR 57TYR 58 0.0002
TYR 58GLN 59 0.0289
GLN 59SER 60 -0.0000
SER 60GLY 61 0.0108
GLY 61LEU 62 -0.0000
LEU 62SER 63 -0.0088
SER 63VAL 64 -0.0002
VAL 64ILE 65 0.0445
ILE 65MET 66 -0.0001
MET 66PRO 67 0.0112
PRO 67VAL 68 -0.0002
VAL 68GLY 69 0.2309
GLY 69GLY 70 0.0002
GLY 70GLN 71 0.1741
GLN 71SER 72 -0.0002
SER 72SER 73 -0.0271
SER 73PHE 74 0.0000
PHE 74TYR 75 0.1030
TYR 75THR 76 -0.0001
THR 76ASP 77 -0.0370
ASP 77TRP 78 -0.0002
TRP 78TYR 79 -0.1351
TYR 79GLN 80 0.0000
GLN 80PRO 81 0.1276
PRO 81SER 82 0.0000
SER 82GLN 83 -0.0085
GLN 83SER 84 -0.0000
SER 84ASN 85 -0.0288
ASN 85GLY 86 -0.0002
GLY 86GLN 87 0.0818
GLN 87ASN 88 -0.0002
ASN 88TYR 89 0.1337
TYR 89THR 90 0.0001
THR 90TYR 91 -0.0832
TYR 91LYS 92 -0.0002
LYS 92TRP 93 -0.0776
TRP 93GLU 94 0.0003
GLU 94THR 95 0.0473
THR 95PHE 96 0.0001
PHE 96LEU 97 -0.0262
LEU 97THR 98 0.0002
THR 98ARG 99 0.0131
ARG 99GLU 100 0.0002
GLU 100MET 101 -0.0440
MET 101PRO 102 0.0000
PRO 102ALA 103 -0.0616
ALA 103TRP 104 0.0001
TRP 104LEU 105 -0.0018
LEU 105GLN 106 -0.0003
GLN 106ALA 107 -0.0453
ALA 107ASN 108 -0.0001
ASN 108LYS 109 -0.0707
LYS 109GLY 110 -0.0000
GLY 110VAL 111 -0.0312
VAL 111SER 112 0.0003
SER 112PRO 113 0.0569
PRO 113THR 114 0.0002
THR 114GLY 115 -0.0344
GLY 115ASN 116 -0.0002
ASN 116ALA 117 -0.0491
ALA 117ALA 118 0.0003
ALA 118VAL 119 0.0045
VAL 119GLY 120 -0.0002
GLY 120LEU 121 0.0850
LEU 121SER 122 -0.0001
SER 122MET 123 0.0156
MET 123SER 124 -0.0002
SER 124GLY 125 -0.0470
GLY 125GLY 126 -0.0001
GLY 126SER 127 0.1143
SER 127ALA 128 0.0003
ALA 128LEU 129 -0.0428
LEU 129ILE 130 -0.0001
ILE 130LEU 131 0.0215
LEU 131ALA 132 0.0002
ALA 132ALA 133 -0.0408
ALA 133TYR 134 -0.0003
TYR 134TYR 135 -0.0042
TYR 135PRO 136 0.0000
PRO 136GLN 137 -0.0086
GLN 137GLN 138 -0.0001
GLN 138PHE 139 -0.0053
PHE 139PRO 140 -0.0000
PRO 140TYR 141 0.0094
TYR 141ALA 142 -0.0001
ALA 142ALA 143 0.0315
ALA 143SER 144 -0.0004
SER 144LEU 145 0.0468
LEU 145SER 146 0.0001
SER 146GLY 147 -0.0184
GLY 147PHE 148 0.0000
PHE 148LEU 149 -0.0267
LEU 149ASN 150 -0.0001
ASN 150PRO 151 0.1006
PRO 151SER 152 0.0002
SER 152GLU 153 0.0564
GLU 153SER 154 -0.0004
SER 154TRP 155 -0.0442
TRP 155TRP 156 -0.0003
TRP 156PRO 157 0.3121
PRO 157THR 158 0.0001
THR 158LEU 159 0.1039
LEU 159ILE 160 -0.0002
ILE 160GLY 161 0.0639
GLY 161LEU 162 0.0001
LEU 162ALA 163 0.1339
ALA 163MET 164 0.0001
MET 164ASN 165 -0.0463
ASN 165ASP 166 0.0003
ASP 166SER 167 0.0466
SER 167GLY 168 0.0005
GLY 168GLY 169 -0.0899
GLY 169TYR 170 0.0001
TYR 170ASN 171 -0.0613
ASN 171ALA 172 -0.0004
ALA 172ASN 173 0.0610
ASN 173SER 174 -0.0001
SER 174MET 175 -0.0051
MET 175TRP 176 -0.0003
TRP 176GLY 177 -0.0599
GLY 177PRO 178 -0.0004
PRO 178SER 179 0.1426
SER 179SER 180 -0.0000
SER 180ASP 181 0.0195
ASP 181PRO 182 0.0000
PRO 182ALA 183 -0.0327
ALA 183TRP 184 0.0001
TRP 184LYS 185 -0.1259
LYS 185ARG 186 -0.0001
ARG 186ASN 187 0.0694
ASN 187ASP 188 0.0004
ASP 188PRO 189 -0.0680
PRO 189MET 190 -0.0004
MET 190VAL 191 0.2270
VAL 191GLN 192 0.0001
GLN 192ILE 193 0.0021
ILE 193PRO 194 -0.0004
PRO 194ARG 195 0.1187
ARG 195LEU 196 -0.0001
LEU 196VAL 197 0.0033
VAL 197ALA 198 -0.0000
ALA 198ASN 199 0.0600
ASN 199ASN 200 -0.0004
ASN 200THR 201 0.0395
THR 201ARG 202 0.0002
ARG 202ILE 203 0.0027
ILE 203TRP 204 -0.0001
TRP 204VAL 205 -0.0929
VAL 205TYR 206 0.0002
TYR 206CYS 207 -0.1337
CYS 207GLY 208 -0.0002
GLY 208ASN 209 -0.1799
ASN 209GLY 210 0.0000
GLY 210THR 211 0.2376
THR 211PRO 212 -0.0000
PRO 212SER 213 0.0773
SER 213ASP 214 -0.0001
ASP 214LEU 215 -0.3438
LEU 215GLY 216 -0.0002
GLY 216GLY 217 -0.0606
GLY 217ASP 218 0.0000
ASP 218ASN 219 -0.0780
ASN 219ILE 220 -0.0002
ILE 220PRO 221 0.0992
PRO 221ALA 222 -0.0002
ALA 222LYS 223 0.0315
LYS 223PHE 224 -0.0002
PHE 224LEU 225 0.2624
LEU 225GLU 226 -0.0001
GLU 226GLY 227 0.0295
GLY 227LEU 228 -0.0001
LEU 228THR 229 -0.2124
THR 229LEU 230 0.0000
LEU 230ARG 231 0.0309
ARG 231THR 232 0.0001
THR 232ASN 233 -0.0017
ASN 233GLN 234 0.0001
GLN 234THR 235 0.1792
THR 235PHE 236 0.0001
PHE 236ARG 237 -0.0028
ARG 237ASP 238 -0.0003
ASP 238THR 239 0.1768
THR 239TYR 240 0.0001
TYR 240ALA 241 -0.0151
ALA 241ALA 242 0.0002
ALA 242ASP 243 0.0201
ASP 243GLY 244 0.0000
GLY 244GLY 245 0.0808
GLY 245ARG 246 -0.0000
ARG 246ASN 247 0.0053
ASN 247GLY 248 -0.0001
GLY 248VAL 249 0.1821
VAL 249PHE 250 -0.0001
PHE 250ASN 251 0.1778
ASN 251PHE 252 -0.0000
PHE 252PRO 253 0.3652
PRO 253PRO 254 -0.0001
PRO 254ASN 255 -0.0156
ASN 255GLY 256 -0.0001
GLY 256THR 257 0.0872
THR 257HIS 258 -0.0001
HIS 258SER 259 0.0229
SER 259TRP 260 -0.0000
TRP 260PRO 261 -0.5001
PRO 261TYR 262 0.0003
TYR 262TRP 263 -0.1992
TRP 263ASN 264 -0.0001
ASN 264GLU 265 -0.3562
GLU 265GLN 266 -0.0003
GLN 266LEU 267 -0.3212
LEU 267VAL 268 -0.0001
VAL 268ALA 269 -0.1158
ALA 269MET 270 -0.0002
MET 270LYS 271 -0.1698
LYS 271ALA 272 -0.0003
ALA 272ASP 273 -0.0363
ASP 273ILE 274 0.0002
ILE 274GLN 275 -0.0550
GLN 275HIS 276 -0.0002
HIS 276VAL 277 0.0273
VAL 277LEU 278 -0.0003
LEU 278ASN 279 -0.0049
ASN 279GLY 280 -0.0002

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.