CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 -0.0002
PRO 2GLY 3 0.2128
GLY 3LEU 4 -0.0002
LEU 4PRO 5 -0.3626
PRO 5VAL 6 0.0004
VAL 6GLU 7 -0.0224
GLU 7TYR 8 0.0002
TYR 8LEU 9 -0.0259
LEU 9GLN 10 0.0000
GLN 10VAL 11 -0.1647
VAL 11PRO 12 -0.0000
PRO 12SER 13 0.2387
SER 13ALA 14 -0.0001
ALA 14SER 15 0.0527
SER 15MET 16 0.0000
MET 16GLY 17 -0.0126
GLY 17ARG 18 0.0002
ARG 18ASP 19 0.2294
ASP 19ILE 20 -0.0004
ILE 20LYS 21 0.0757
LYS 21VAL 22 0.0002
VAL 22GLN 23 0.0771
GLN 23PHE 24 0.0003
PHE 24GLN 25 0.2095
GLN 25GLY 26 -0.0004
GLY 26GLY 27 0.1580
GLY 27GLY 28 0.0002
GLY 28PRO 29 -0.0309
PRO 29HIS 30 0.0002
HIS 30ALA 31 0.0416
ALA 31VAL 32 -0.0001
VAL 32TYR 33 0.1498
TYR 33LEU 34 0.0001
LEU 34LEU 35 0.1563
LEU 35ASP 36 -0.0001
ASP 36GLY 37 0.0341
GLY 37LEU 38 -0.0002
LEU 38ARG 39 0.1289
ARG 39ALA 40 0.0003
ALA 40GLN 41 -0.0294
GLN 41ASP 42 -0.0001
ASP 42ASP 43 0.1878
ASP 43TYR 44 0.0002
TYR 44ASN 45 -0.0744
ASN 45GLY 46 -0.0000
GLY 46TRP 47 0.0674
TRP 47ASP 48 0.0001
ASP 48ILE 49 0.0324
ILE 49ASN 50 -0.0003
ASN 50THR 51 0.0098
THR 51PRO 52 0.0001
PRO 52ALA 53 0.0082
ALA 53PHE 54 0.0001
PHE 54GLU 55 0.1130
GLU 55GLU 56 0.0002
GLU 56TYR 57 -0.0219
TYR 57TYR 58 0.0002
TYR 58GLN 59 -0.0897
GLN 59SER 60 0.0001
SER 60GLY 61 -0.0217
GLY 61LEU 62 -0.0001
LEU 62SER 63 0.1130
SER 63VAL 64 -0.0003
VAL 64ILE 65 0.1949
ILE 65MET 66 -0.0004
MET 66PRO 67 0.2204
PRO 67VAL 68 0.0003
VAL 68GLY 69 0.3897
GLY 69GLY 70 -0.0001
GLY 70GLN 71 0.0687
GLN 71SER 72 -0.0001
SER 72SER 73 -0.0056
SER 73PHE 74 0.0001
PHE 74TYR 75 0.0553
TYR 75THR 76 -0.0003
THR 76ASP 77 -0.0706
ASP 77TRP 78 -0.0003
TRP 78TYR 79 0.1396
TYR 79GLN 80 -0.0001
GLN 80PRO 81 -0.1658
PRO 81SER 82 0.0003
SER 82GLN 83 0.1604
GLN 83SER 84 0.0004
SER 84ASN 85 -0.0279
ASN 85GLY 86 0.0002
GLY 86GLN 87 0.1489
GLN 87ASN 88 0.0002
ASN 88TYR 89 0.0716
TYR 89THR 90 0.0000
THR 90TYR 91 -0.0214
TYR 91LYS 92 -0.0003
LYS 92TRP 93 0.0334
TRP 93GLU 94 -0.0000
GLU 94THR 95 -0.1703
THR 95PHE 96 0.0001
PHE 96LEU 97 -0.0800
LEU 97THR 98 -0.0001
THR 98ARG 99 -0.0693
ARG 99GLU 100 0.0001
GLU 100MET 101 0.0575
MET 101PRO 102 -0.0001
PRO 102ALA 103 -0.1365
ALA 103TRP 104 0.0002
TRP 104LEU 105 0.0645
LEU 105GLN 106 0.0001
GLN 106ALA 107 -0.1263
ALA 107ASN 108 0.0004
ASN 108LYS 109 -0.0100
LYS 109GLY 110 0.0002
GLY 110VAL 111 -0.1410
VAL 111SER 112 0.0002
SER 112PRO 113 0.0728
PRO 113THR 114 -0.0004
THR 114GLY 115 -0.0611
GLY 115ASN 116 0.0004
ASN 116ALA 117 -0.0988
ALA 117ALA 118 -0.0001
ALA 118VAL 119 -0.0256
VAL 119GLY 120 -0.0002
GLY 120LEU 121 -0.0493
LEU 121SER 122 -0.0001
SER 122MET 123 -0.0794
MET 123SER 124 -0.0001
SER 124GLY 125 -0.0338
GLY 125GLY 126 0.0004
GLY 126SER 127 -0.0972
SER 127ALA 128 -0.0004
ALA 128LEU 129 -0.0270
LEU 129ILE 130 0.0002
ILE 130LEU 131 -0.0039
LEU 131ALA 132 0.0001
ALA 132ALA 133 -0.0277
ALA 133TYR 134 -0.0001
TYR 134TYR 135 -0.0039
TYR 135PRO 136 0.0001
PRO 136GLN 137 -0.1650
GLN 137GLN 138 0.0000
GLN 138PHE 139 -0.1012
PHE 139PRO 140 0.0000
PRO 140TYR 141 -0.0411
TYR 141ALA 142 -0.0000
ALA 142ALA 143 -0.0826
ALA 143SER 144 -0.0001
SER 144LEU 145 0.0064
LEU 145SER 146 0.0000
SER 146GLY 147 -0.0334
GLY 147PHE 148 0.0001
PHE 148LEU 149 0.1211
LEU 149ASN 150 0.0001
ASN 150PRO 151 -0.2916
PRO 151SER 152 -0.0003
SER 152GLU 153 0.0240
GLU 153SER 154 0.0000
SER 154TRP 155 -0.0172
TRP 155TRP 156 0.0001
TRP 156PRO 157 -0.0961
PRO 157THR 158 -0.0001
THR 158LEU 159 -0.1135
LEU 159ILE 160 0.0001
ILE 160GLY 161 -0.0903
GLY 161LEU 162 0.0001
LEU 162ALA 163 -0.0449
ALA 163MET 164 0.0002
MET 164ASN 165 -0.0051
ASN 165ASP 166 -0.0000
ASP 166SER 167 0.0479
SER 167GLY 168 -0.0001
GLY 168GLY 169 -0.0323
GLY 169TYR 170 -0.0002
TYR 170ASN 171 0.0259
ASN 171ALA 172 -0.0003
ALA 172ASN 173 0.0342
ASN 173SER 174 0.0003
SER 174MET 175 -0.1884
MET 175TRP 176 0.0002
TRP 176GLY 177 0.2236
GLY 177PRO 178 -0.0003
PRO 178SER 179 -0.0887
SER 179SER 180 -0.0003
SER 180ASP 181 0.0548
ASP 181PRO 182 0.0002
PRO 182ALA 183 0.1254
ALA 183TRP 184 0.0002
TRP 184LYS 185 -0.1590
LYS 185ARG 186 -0.0002
ARG 186ASN 187 -0.0111
ASN 187ASP 188 0.0001
ASP 188PRO 189 -0.1809
PRO 189MET 190 -0.0001
MET 190VAL 191 -0.0718
VAL 191GLN 192 -0.0003
GLN 192ILE 193 -0.3798
ILE 193PRO 194 -0.0002
PRO 194ARG 195 -0.1592
ARG 195LEU 196 0.0003
LEU 196VAL 197 -0.1185
VAL 197ALA 198 -0.0002
ALA 198ASN 199 -0.1910
ASN 199ASN 200 -0.0003
ASN 200THR 201 0.0488
THR 201ARG 202 -0.0001
ARG 202ILE 203 -0.0786
ILE 203TRP 204 -0.0000
TRP 204VAL 205 -0.1377
VAL 205TYR 206 0.0000
TYR 206CYS 207 -0.0783
CYS 207GLY 208 -0.0001
GLY 208ASN 209 -0.0252
ASN 209GLY 210 0.0002
GLY 210THR 211 -0.0165
THR 211PRO 212 0.0004
PRO 212SER 213 0.0458
SER 213ASP 214 -0.0002
ASP 214LEU 215 -0.0142
LEU 215GLY 216 -0.0001
GLY 216GLY 217 -0.0049
GLY 217ASP 218 -0.0003
ASP 218ASN 219 0.0311
ASN 219ILE 220 -0.0002
ILE 220PRO 221 -0.0176
PRO 221ALA 222 0.0001
ALA 222LYS 223 -0.0625
LYS 223PHE 224 0.0000
PHE 224LEU 225 -0.0537
LEU 225GLU 226 0.0003
GLU 226GLY 227 -0.0693
GLY 227LEU 228 0.0002
LEU 228THR 229 0.0433
THR 229LEU 230 0.0000
LEU 230ARG 231 0.0677
ARG 231THR 232 -0.0000
THR 232ASN 233 -0.2835
ASN 233GLN 234 0.0001
GLN 234THR 235 -0.0549
THR 235PHE 236 0.0002
PHE 236ARG 237 -0.1893
ARG 237ASP 238 0.0002
ASP 238THR 239 0.0588
THR 239TYR 240 0.0000
TYR 240ALA 241 -0.1267
ALA 241ALA 242 -0.0001
ALA 242ASP 243 -0.1397
ASP 243GLY 244 0.0000
GLY 244GLY 245 0.2550
GLY 245ARG 246 -0.0001
ARG 246ASN 247 0.0314
ASN 247GLY 248 0.0003
GLY 248VAL 249 0.2183
VAL 249PHE 250 0.0004
PHE 250ASN 251 0.1692
ASN 251PHE 252 0.0000
PHE 252PRO 253 0.0764
PRO 253PRO 254 -0.0000
PRO 254ASN 255 0.0439
ASN 255GLY 256 -0.0003
GLY 256THR 257 -0.0088
THR 257HIS 258 0.0001
HIS 258SER 259 0.0376
SER 259TRP 260 0.0001
TRP 260PRO 261 0.0709
PRO 261TYR 262 -0.0001
TYR 262TRP 263 -0.1572
TRP 263ASN 264 -0.0003
ASN 264GLU 265 0.1806
GLU 265GLN 266 0.0001
GLN 266LEU 267 -0.1008
LEU 267VAL 268 -0.0003
VAL 268ALA 269 0.2304
ALA 269MET 270 0.0000
MET 270LYS 271 -0.0705
LYS 271ALA 272 0.0001
ALA 272ASP 273 0.2162
ASP 273ILE 274 -0.0004
ILE 274GLN 275 -0.0307
GLN 275HIS 276 -0.0000
HIS 276VAL 277 0.1626
VAL 277LEU 278 0.0002
LEU 278ASN 279 0.0934
ASN 279GLY 280 -0.0002

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.