CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 -0.0001
PRO 2GLY 3 0.3810
GLY 3LEU 4 0.0000
LEU 4PRO 5 0.5393
PRO 5VAL 6 -0.0002
VAL 6GLU 7 0.2821
GLU 7TYR 8 -0.0002
TYR 8LEU 9 0.1152
LEU 9GLN 10 0.0003
GLN 10VAL 11 -0.0849
VAL 11PRO 12 0.0002
PRO 12SER 13 0.1916
SER 13ALA 14 -0.0001
ALA 14SER 15 0.0561
SER 15MET 16 -0.0005
MET 16GLY 17 0.0892
GLY 17ARG 18 0.0001
ARG 18ASP 19 0.2692
ASP 19ILE 20 0.0001
ILE 20LYS 21 0.1113
LYS 21VAL 22 0.0003
VAL 22GLN 23 0.1510
GLN 23PHE 24 0.0001
PHE 24GLN 25 0.1453
GLN 25GLY 26 0.0002
GLY 26GLY 27 -0.0758
GLY 27GLY 28 -0.0002
GLY 28PRO 29 0.1367
PRO 29HIS 30 -0.0001
HIS 30ALA 31 0.0294
ALA 31VAL 32 -0.0004
VAL 32TYR 33 0.0981
TYR 33LEU 34 -0.0003
LEU 34LEU 35 -0.0252
LEU 35ASP 36 0.0002
ASP 36GLY 37 -0.1888
GLY 37LEU 38 0.0001
LEU 38ARG 39 0.1466
ARG 39ALA 40 0.0002
ALA 40GLN 41 -0.0437
GLN 41ASP 42 0.0003
ASP 42ASP 43 0.2108
ASP 43TYR 44 -0.0001
TYR 44ASN 45 -0.0282
ASN 45GLY 46 -0.0002
GLY 46TRP 47 -0.0198
TRP 47ASP 48 0.0002
ASP 48ILE 49 -0.1192
ILE 49ASN 50 -0.0003
ASN 50THR 51 -0.0345
THR 51PRO 52 -0.0001
PRO 52ALA 53 0.0209
ALA 53PHE 54 0.0000
PHE 54GLU 55 -0.0678
GLU 55GLU 56 0.0001
GLU 56TYR 57 -0.0169
TYR 57TYR 58 -0.0002
TYR 58GLN 59 0.1190
GLN 59SER 60 -0.0003
SER 60GLY 61 0.1217
GLY 61LEU 62 -0.0001
LEU 62SER 63 -0.0141
SER 63VAL 64 0.0004
VAL 64ILE 65 0.1086
ILE 65MET 66 -0.0003
MET 66PRO 67 0.0690
PRO 67VAL 68 0.0004
VAL 68GLY 69 0.2856
GLY 69GLY 70 0.0001
GLY 70GLN 71 0.0282
GLN 71SER 72 0.0003
SER 72SER 73 0.0030
SER 73PHE 74 -0.0003
PHE 74TYR 75 0.0036
TYR 75THR 76 0.0000
THR 76ASP 77 -0.0146
ASP 77TRP 78 0.0003
TRP 78TYR 79 0.0282
TYR 79GLN 80 0.0000
GLN 80PRO 81 -0.0850
PRO 81SER 82 0.0004
SER 82GLN 83 0.1367
GLN 83SER 84 0.0002
SER 84ASN 85 -0.0090
ASN 85GLY 86 -0.0003
GLY 86GLN 87 0.1810
GLN 87ASN 88 0.0003
ASN 88TYR 89 0.1041
TYR 89THR 90 -0.0000
THR 90TYR 91 -0.0210
TYR 91LYS 92 0.0001
LYS 92TRP 93 0.0604
TRP 93GLU 94 -0.0003
GLU 94THR 95 0.0077
THR 95PHE 96 0.0003
PHE 96LEU 97 0.0221
LEU 97THR 98 0.0003
THR 98ARG 99 0.0406
ARG 99GLU 100 0.0001
GLU 100MET 101 0.0997
MET 101PRO 102 0.0000
PRO 102ALA 103 0.0030
ALA 103TRP 104 -0.0002
TRP 104LEU 105 0.0946
LEU 105GLN 106 0.0000
GLN 106ALA 107 -0.0527
ALA 107ASN 108 -0.0001
ASN 108LYS 109 0.1090
LYS 109GLY 110 0.0001
GLY 110VAL 111 -0.0793
VAL 111SER 112 0.0001
SER 112PRO 113 0.0289
PRO 113THR 114 -0.0001
THR 114GLY 115 0.0386
GLY 115ASN 116 -0.0004
ASN 116ALA 117 0.1027
ALA 117ALA 118 0.0002
ALA 118VAL 119 0.1505
VAL 119GLY 120 0.0002
GLY 120LEU 121 0.1864
LEU 121SER 122 0.0003
SER 122MET 123 -0.0368
MET 123SER 124 -0.0001
SER 124GLY 125 -0.0795
GLY 125GLY 126 -0.0003
GLY 126SER 127 -0.0198
SER 127ALA 128 0.0001
ALA 128LEU 129 -0.0612
LEU 129ILE 130 0.0002
ILE 130LEU 131 -0.1006
LEU 131ALA 132 -0.0001
ALA 132ALA 133 -0.1177
ALA 133TYR 134 0.0003
TYR 134TYR 135 -0.1961
TYR 135PRO 136 0.0001
PRO 136GLN 137 -0.1063
GLN 137GLN 138 -0.0001
GLN 138PHE 139 0.0927
PHE 139PRO 140 -0.0002
PRO 140TYR 141 0.1000
TYR 141ALA 142 0.0001
ALA 142ALA 143 0.1388
ALA 143SER 144 -0.0002
SER 144LEU 145 0.0658
LEU 145SER 146 0.0001
SER 146GLY 147 -0.1248
GLY 147PHE 148 -0.0001
PHE 148LEU 149 0.2272
LEU 149ASN 150 -0.0005
ASN 150PRO 151 -0.2893
PRO 151SER 152 -0.0003
SER 152GLU 153 -0.0595
GLU 153SER 154 0.0002
SER 154TRP 155 -0.0478
TRP 155TRP 156 0.0000
TRP 156PRO 157 -0.2509
PRO 157THR 158 0.0000
THR 158LEU 159 -0.0669
LEU 159ILE 160 -0.0000
ILE 160GLY 161 -0.2705
GLY 161LEU 162 -0.0002
LEU 162ALA 163 -0.0303
ALA 163MET 164 0.0001
MET 164ASN 165 -0.0191
ASN 165ASP 166 0.0003
ASP 166SER 167 -0.0309
SER 167GLY 168 -0.0004
GLY 168GLY 169 0.0155
GLY 169TYR 170 0.0004
TYR 170ASN 171 0.1738
ASN 171ALA 172 0.0000
ALA 172ASN 173 0.0456
ASN 173SER 174 -0.0001
SER 174MET 175 -0.1155
MET 175TRP 176 0.0001
TRP 176GLY 177 0.0517
GLY 177PRO 178 -0.0000
PRO 178SER 179 -0.1299
SER 179SER 180 0.0004
SER 180ASP 181 0.0158
ASP 181PRO 182 0.0000
PRO 182ALA 183 0.0324
ALA 183TRP 184 -0.0002
TRP 184LYS 185 0.0079
LYS 185ARG 186 -0.0003
ARG 186ASN 187 0.0566
ASN 187ASP 188 0.0000
ASP 188PRO 189 -0.0997
PRO 189MET 190 -0.0002
MET 190VAL 191 -0.1202
VAL 191GLN 192 0.0000
GLN 192ILE 193 -0.0135
ILE 193PRO 194 0.0001
PRO 194ARG 195 0.0245
ARG 195LEU 196 0.0001
LEU 196VAL 197 0.1240
VAL 197ALA 198 -0.0001
ALA 198ASN 199 0.0520
ASN 199ASN 200 -0.0002
ASN 200THR 201 -0.0715
THR 201ARG 202 0.0001
ARG 202ILE 203 -0.0072
ILE 203TRP 204 -0.0000
TRP 204VAL 205 0.0034
VAL 205TYR 206 -0.0001
TYR 206CYS 207 0.0446
CYS 207GLY 208 -0.0004
GLY 208ASN 209 0.0578
ASN 209GLY 210 -0.0002
GLY 210THR 211 -0.0487
THR 211PRO 212 -0.0005
PRO 212SER 213 -0.1443
SER 213ASP 214 0.0001
ASP 214LEU 215 0.2310
LEU 215GLY 216 -0.0003
GLY 216GLY 217 -0.0068
GLY 217ASP 218 0.0001
ASP 218ASN 219 -0.0742
ASN 219ILE 220 0.0001
ILE 220PRO 221 0.1063
PRO 221ALA 222 -0.0002
ALA 222LYS 223 0.0950
LYS 223PHE 224 0.0002
PHE 224LEU 225 0.0808
LEU 225GLU 226 0.0002
GLU 226GLY 227 0.0605
GLY 227LEU 228 -0.0002
LEU 228THR 229 0.0489
THR 229LEU 230 -0.0001
LEU 230ARG 231 0.0932
ARG 231THR 232 0.0003
THR 232ASN 233 -0.2065
ASN 233GLN 234 0.0002
GLN 234THR 235 -0.1529
THR 235PHE 236 0.0002
PHE 236ARG 237 -0.0289
ARG 237ASP 238 -0.0002
ASP 238THR 239 -0.1331
THR 239TYR 240 -0.0005
TYR 240ALA 241 0.0242
ALA 241ALA 242 0.0002
ALA 242ASP 243 0.0390
ASP 243GLY 244 0.0001
GLY 244GLY 245 -0.2826
GLY 245ARG 246 -0.0001
ARG 246ASN 247 -0.2306
ASN 247GLY 248 -0.0000
GLY 248VAL 249 -0.0629
VAL 249PHE 250 -0.0000
PHE 250ASN 251 -0.2347
ASN 251PHE 252 -0.0001
PHE 252PRO 253 -0.4290
PRO 253PRO 254 0.0000
PRO 254ASN 255 0.0937
ASN 255GLY 256 0.0002
GLY 256THR 257 0.1164
THR 257HIS 258 -0.0004
HIS 258SER 259 0.2330
SER 259TRP 260 0.0001
TRP 260PRO 261 0.2164
PRO 261TYR 262 0.0001
TYR 262TRP 263 0.0911
TRP 263ASN 264 0.0000
ASN 264GLU 265 -0.0567
GLU 265GLN 266 -0.0002
GLN 266LEU 267 -0.0219
LEU 267VAL 268 -0.0003
VAL 268ALA 269 -0.2843
ALA 269MET 270 -0.0002
MET 270LYS 271 -0.0778
LYS 271ALA 272 0.0002
ALA 272ASP 273 -0.3880
ASP 273ILE 274 0.0004
ILE 274GLN 275 -0.0629
GLN 275HIS 276 -0.0003
HIS 276VAL 277 -0.1907
VAL 277LEU 278 -0.0003
LEU 278ASN 279 -0.1711
ASN 279GLY 280 -0.0002

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.