CNRS Nantes University US2B US2B
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***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220092131172147

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ARG 1PRO 2 -0.0001
PRO 2GLY 3 -0.1525
GLY 3LEU 4 0.0002
LEU 4PRO 5 -0.0200
PRO 5VAL 6 0.0004
VAL 6GLU 7 0.0405
GLU 7TYR 8 -0.0001
TYR 8LEU 9 0.0543
LEU 9GLN 10 0.0003
GLN 10VAL 11 0.0086
VAL 11PRO 12 -0.0002
PRO 12SER 13 0.0565
SER 13ALA 14 -0.0001
ALA 14SER 15 0.0176
SER 15MET 16 -0.0001
MET 16GLY 17 -0.0454
GLY 17ARG 18 -0.0000
ARG 18ASP 19 0.0051
ASP 19ILE 20 0.0005
ILE 20LYS 21 -0.0243
LYS 21VAL 22 -0.0000
VAL 22GLN 23 0.0522
GLN 23PHE 24 -0.0002
PHE 24GLN 25 -0.0911
GLN 25GLY 26 0.0000
GLY 26GLY 27 -0.0757
GLY 27GLY 28 0.0004
GLY 28PRO 29 0.0356
PRO 29HIS 30 -0.0003
HIS 30ALA 31 -0.0083
ALA 31VAL 32 0.0002
VAL 32TYR 33 -0.0156
TYR 33LEU 34 0.0001
LEU 34LEU 35 -0.1245
LEU 35ASP 36 0.0001
ASP 36GLY 37 -0.2756
GLY 37LEU 38 -0.0004
LEU 38ARG 39 0.1052
ARG 39ALA 40 0.0000
ALA 40GLN 41 0.1315
GLN 41ASP 42 -0.0002
ASP 42ASP 43 -0.1087
ASP 43TYR 44 0.0001
TYR 44ASN 45 0.0968
ASN 45GLY 46 0.0002
GLY 46TRP 47 -0.0871
TRP 47ASP 48 -0.0003
ASP 48ILE 49 0.0269
ILE 49ASN 50 -0.0001
ASN 50THR 51 -0.0038
THR 51PRO 52 -0.0000
PRO 52ALA 53 0.0121
ALA 53PHE 54 -0.0000
PHE 54GLU 55 -0.0648
GLU 55GLU 56 0.0002
GLU 56TYR 57 -0.0300
TYR 57TYR 58 0.0001
TYR 58GLN 59 -0.0437
GLN 59SER 60 0.0002
SER 60GLY 61 0.0212
GLY 61LEU 62 0.0000
LEU 62SER 63 -0.0688
SER 63VAL 64 0.0003
VAL 64ILE 65 -0.0516
ILE 65MET 66 0.0004
MET 66PRO 67 -0.0938
PRO 67VAL 68 -0.0003
VAL 68GLY 69 -0.1853
GLY 69GLY 70 0.0001
GLY 70GLN 71 0.0167
GLN 71SER 72 0.0004
SER 72SER 73 0.0237
SER 73PHE 74 0.0000
PHE 74TYR 75 -0.0348
TYR 75THR 76 0.0002
THR 76ASP 77 -0.0385
ASP 77TRP 78 -0.0002
TRP 78TYR 79 0.0409
TYR 79GLN 80 0.0003
GLN 80PRO 81 -0.0392
PRO 81SER 82 -0.0000
SER 82GLN 83 -0.0375
GLN 83SER 84 0.0000
SER 84ASN 85 -0.0037
ASN 85GLY 86 -0.0003
GLY 86GLN 87 -0.0336
GLN 87ASN 88 0.0002
ASN 88TYR 89 0.0603
TYR 89THR 90 0.0000
THR 90TYR 91 0.0191
TYR 91LYS 92 0.0000
LYS 92TRP 93 -0.0043
TRP 93GLU 94 -0.0001
GLU 94THR 95 -0.0859
THR 95PHE 96 -0.0000
PHE 96LEU 97 -0.0121
LEU 97THR 98 -0.0001
THR 98ARG 99 -0.0511
ARG 99GLU 100 -0.0001
GLU 100MET 101 0.0689
MET 101PRO 102 -0.0000
PRO 102ALA 103 -0.0275
ALA 103TRP 104 0.0003
TRP 104LEU 105 0.0227
LEU 105GLN 106 0.0002
GLN 106ALA 107 -0.0645
ALA 107ASN 108 0.0001
ASN 108LYS 109 0.0291
LYS 109GLY 110 0.0005
GLY 110VAL 111 -0.0183
VAL 111SER 112 -0.0001
SER 112PRO 113 0.0593
PRO 113THR 114 0.0001
THR 114GLY 115 -0.0820
GLY 115ASN 116 -0.0001
ASN 116ALA 117 -0.0360
ALA 117ALA 118 0.0001
ALA 118VAL 119 0.0729
VAL 119GLY 120 -0.0001
GLY 120LEU 121 0.0480
LEU 121SER 122 -0.0001
SER 122MET 123 -0.1096
MET 123SER 124 0.0000
SER 124GLY 125 0.0154
GLY 125GLY 126 -0.0001
GLY 126SER 127 0.0159
SER 127ALA 128 0.0001
ALA 128LEU 129 0.0010
LEU 129ILE 130 -0.0001
ILE 130LEU 131 0.0148
LEU 131ALA 132 -0.0003
ALA 132ALA 133 0.0577
ALA 133TYR 134 -0.0003
TYR 134TYR 135 0.0401
TYR 135PRO 136 0.0000
PRO 136GLN 137 -0.1000
GLN 137GLN 138 -0.0003
GLN 138PHE 139 -0.0731
PHE 139PRO 140 0.0003
PRO 140TYR 141 -0.0066
TYR 141ALA 142 -0.0000
ALA 142ALA 143 -0.0171
ALA 143SER 144 0.0001
SER 144LEU 145 0.0228
LEU 145SER 146 0.0001
SER 146GLY 147 -0.1857
GLY 147PHE 148 -0.0001
PHE 148LEU 149 0.0072
LEU 149ASN 150 -0.0003
ASN 150PRO 151 0.1304
PRO 151SER 152 -0.0002
SER 152GLU 153 -0.0312
GLU 153SER 154 0.0002
SER 154TRP 155 0.0756
TRP 155TRP 156 -0.0002
TRP 156PRO 157 -0.0930
PRO 157THR 158 0.0001
THR 158LEU 159 -0.1600
LEU 159ILE 160 0.0000
ILE 160GLY 161 0.0532
GLY 161LEU 162 -0.0003
LEU 162ALA 163 -0.1917
ALA 163MET 164 0.0000
MET 164ASN 165 -0.0389
ASN 165ASP 166 -0.0001
ASP 166SER 167 -0.0779
SER 167GLY 168 -0.0004
GLY 168GLY 169 -0.1032
GLY 169TYR 170 0.0000
TYR 170ASN 171 -0.1238
ASN 171ALA 172 0.0001
ALA 172ASN 173 -0.0844
ASN 173SER 174 -0.0003
SER 174MET 175 0.0472
MET 175TRP 176 0.0001
TRP 176GLY 177 -0.0127
GLY 177PRO 178 -0.0000
PRO 178SER 179 -0.0756
SER 179SER 180 -0.0002
SER 180ASP 181 -0.0351
ASP 181PRO 182 0.0000
PRO 182ALA 183 -0.0109
ALA 183TRP 184 0.0001
TRP 184LYS 185 0.1374
LYS 185ARG 186 0.0000
ARG 186ASN 187 -0.0724
ASN 187ASP 188 -0.0001
ASP 188PRO 189 0.0891
PRO 189MET 190 0.0003
MET 190VAL 191 -0.1057
VAL 191GLN 192 0.0001
GLN 192ILE 193 0.0926
ILE 193PRO 194 -0.0003
PRO 194ARG 195 -0.1627
ARG 195LEU 196 0.0005
LEU 196VAL 197 -0.0603
VAL 197ALA 198 -0.0002
ALA 198ASN 199 -0.1689
ASN 199ASN 200 -0.0002
ASN 200THR 201 0.0274
THR 201ARG 202 0.0003
ARG 202ILE 203 -0.0695
ILE 203TRP 204 0.0000
TRP 204VAL 205 -0.1214
VAL 205TYR 206 0.0001
TYR 206CYS 207 -0.1592
CYS 207GLY 208 -0.0001
GLY 208ASN 209 -0.0462
ASN 209GLY 210 0.0000
GLY 210THR 211 -0.0426
THR 211PRO 212 0.0001
PRO 212SER 213 -0.1303
SER 213ASP 214 0.0001
ASP 214LEU 215 0.0488
LEU 215GLY 216 -0.0001
GLY 216GLY 217 -0.0460
GLY 217ASP 218 0.0001
ASP 218ASN 219 -0.0561
ASN 219ILE 220 0.0002
ILE 220PRO 221 0.0624
PRO 221ALA 222 0.0001
ALA 222LYS 223 0.1208
LYS 223PHE 224 -0.0002
PHE 224LEU 225 0.1044
LEU 225GLU 226 -0.0000
GLU 226GLY 227 0.1948
GLY 227LEU 228 0.0001
LEU 228THR 229 0.0411
THR 229LEU 230 -0.0002
LEU 230ARG 231 0.1414
ARG 231THR 232 -0.0000
THR 232ASN 233 0.0098
ASN 233GLN 234 -0.0002
GLN 234THR 235 0.0702
THR 235PHE 236 -0.0002
PHE 236ARG 237 0.0444
ARG 237ASP 238 -0.0003
ASP 238THR 239 0.0301
THR 239TYR 240 0.0002
TYR 240ALA 241 0.0234
ALA 241ALA 242 -0.0004
ALA 242ASP 243 -0.0401
ASP 243GLY 244 0.0001
GLY 244GLY 245 0.0696
GLY 245ARG 246 -0.0001
ARG 246ASN 247 -0.0520
ASN 247GLY 248 -0.0001
GLY 248VAL 249 0.0108
VAL 249PHE 250 0.0002
PHE 250ASN 251 -0.0190
ASN 251PHE 252 -0.0000
PHE 252PRO 253 0.0444
PRO 253PRO 254 -0.0000
PRO 254ASN 255 0.0948
ASN 255GLY 256 0.0004
GLY 256THR 257 0.0738
THR 257HIS 258 -0.0001
HIS 258SER 259 0.3664
SER 259TRP 260 -0.0004
TRP 260PRO 261 -0.1062
PRO 261TYR 262 0.0002
TYR 262TRP 263 -0.0338
TRP 263ASN 264 -0.0001
ASN 264GLU 265 -0.0678
GLU 265GLN 266 -0.0001
GLN 266LEU 267 0.0088
LEU 267VAL 268 -0.0002
VAL 268ALA 269 0.0186
ALA 269MET 270 0.0001
MET 270LYS 271 -0.0400
LYS 271ALA 272 -0.0001
ALA 272ASP 273 0.0606
ASP 273ILE 274 -0.0001
ILE 274GLN 275 -0.0180
GLN 275HIS 276 0.0001
HIS 276VAL 277 0.0998
VAL 277LEU 278 0.0001
LEU 278ASN 279 0.0641
ASN 279GLY 280 -0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.