CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4CDB_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240221152119307497

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ALA 2 -0.0001
ALA 2PRO 3 0.0000
PRO 3PRO 4 -0.0568
PRO 4ALA 5 0.0002
ALA 5SER 6 -0.0001
SER 6PRO 7 -0.1002
PRO 7PRO 8 -0.0000
PRO 8ALA 9 0.0002
ALA 9SER 10 -0.0079
SER 10PRO 11 -0.0001
PRO 11LYS 12 -0.0001
LYS 12THR 13 -0.0029
THR 13PRO 14 -0.0000
PRO 14ILE 15 -0.0002
ILE 15GLU 16 -0.0015
GLU 16LYS 17 -0.0003
LYS 17LYS 18 -0.0002
LYS 18HIS 19 0.0024
HIS 19ALA 20 -0.0003
ALA 20ASP 21 -0.0002
ASP 21GLU 22 0.0014
GLU 22ILE 23 0.0001
ILE 23ASP 24 0.0001
ASP 24LYS 25 -0.0051
LYS 25TYR 26 -0.0000
TYR 26ILE 27 0.0001
ILE 27GLN 28 -0.0021
GLN 28GLY 29 -0.0002
GLY 29LEU 30 0.0003
LEU 30ASP 31 -0.0038
ASP 31TYR 32 0.0002
TYR 32ASN 33 0.0000
ASN 33LYS 34 -0.0012
LYS 34ASN 35 0.0002
ASN 35ASN 36 0.0001
ASN 36VAL 37 -0.0113
VAL 37LEU 38 -0.0003
LEU 38VAL 39 0.0002
VAL 39TYR 40 0.0568
TYR 40HIS 41 -0.0003
HIS 41GLY 42 -0.0003
GLY 42ASP 43 0.0666
ASP 43ALA 44 0.0001
ALA 44VAL 45 0.0004
VAL 45THR 46 -0.0169
THR 46ASN 47 -0.0002
ASN 47VAL 48 -0.0001
VAL 48PRO 49 0.0708
PRO 49PRO 50 -0.0000
PRO 50ARG 51 -0.0000
ARG 51LYS 52 0.0448
LYS 52GLY 53 -0.0000
GLY 53TYR 54 0.0000
TYR 54LYS 55 0.0790
LYS 55ASP 56 0.0000
ASP 56GLY 57 -0.0001
GLY 57ASN 58 0.0139
ASN 58GLU 59 -0.0006
GLU 59TYR 60 0.0002
TYR 60ILE 61 -0.0043
ILE 61VAL 62 0.0002
VAL 62VAL 63 0.0000
VAL 63GLU 64 0.0144
GLU 64LYS 65 0.0002
LYS 65LYS 66 -0.0001
LYS 66LYS 67 0.0550
LYS 67LYS 68 -0.0001
LYS 68SER 69 0.0001
SER 69ILE 70 0.0676
ILE 70ASN 71 0.0004
ASN 71GLN 72 -0.0001
GLN 72ASN 73 0.0051
ASN 73ASN 74 -0.0001
ASN 74ALA 75 -0.0000
ALA 75ASP 76 0.0077
ASP 76ILE 77 0.0000
ILE 77GLN 78 0.0001
GLN 78VAL 79 -0.0010
VAL 79VAL 80 0.0002
VAL 80ASN 81 -0.0000
ASN 81ALA 82 0.0064
ALA 82ILE 83 0.0004
ILE 83SER 84 -0.0000
SER 84SER 85 0.0109
SER 85LEU 86 -0.0001
LEU 86THR 87 0.0001
THR 87TYR 88 0.0150
TYR 88PRO 89 0.0001
PRO 89GLY 90 -0.0001
GLY 90ALA 91 -0.0055
ALA 91LEU 92 -0.0000
LEU 92VAL 93 0.0004
VAL 93LYS 94 0.0017
LYS 94ALA 95 0.0004
ALA 95ASN 96 0.0002
ASN 96SER 97 0.0168
SER 97GLU 98 0.0001
GLU 98LEU 99 0.0002
LEU 99VAL 100 0.0223
VAL 100GLU 101 -0.0002
GLU 101ASN 102 -0.0002
ASN 102GLN 103 0.0222
GLN 103PRO 104 0.0001
PRO 104ASP 105 -0.0001
ASP 105VAL 106 0.0162
VAL 106LEU 107 -0.0003
LEU 107PRO 108 0.0001
PRO 108VAL 109 0.0197
VAL 109LYS 110 -0.0003
LYS 110ARG 111 0.0000
ARG 111ASP 112 0.0000
ASP 112SER 113 0.0000
SER 113LEU 114 0.0001
LEU 114THR 115 -0.0174
THR 115LEU 116 -0.0001
LEU 116SER 117 0.0000
SER 117ILE 118 -0.0239
ILE 118ASP 119 -0.0003
ASP 119LEU 120 -0.0001
LEU 120PRO 121 0.0044
PRO 121GLY 122 -0.0000
GLY 122MET 123 -0.0002
MET 123THR 124 -0.0350
THR 124ASN 125 0.0002
ASN 125GLN 126 0.0000
GLN 126ASP 127 0.0220
ASP 127ASN 128 -0.0003
ASN 128LYS 129 0.0002
LYS 129ILE 130 -0.0151
ILE 130VAL 131 -0.0003
VAL 131VAL 132 0.0002
VAL 132LYS 133 -0.0269
LYS 133ASN 134 -0.0001
ASN 134ALA 135 0.0003
ALA 135THR 136 0.0070
THR 136LYS 137 0.0003
LYS 137SER 138 0.0001
SER 138ASN 139 0.0168
ASN 139VAL 140 0.0000
VAL 140ASN 141 -0.0001
ASN 141ASN 142 0.0114
ASN 142ALA 143 0.0002
ALA 143VAL 144 -0.0005
VAL 144ASN 145 -0.0005
ASN 145THR 146 0.0002
THR 146LEU 147 -0.0001
LEU 147VAL 148 -0.0221
VAL 148GLU 149 -0.0001
GLU 149ARG 150 0.0003
ARG 150TRP 151 -0.0028
TRP 151ASN 152 -0.0003
ASN 152GLU 153 0.0003
GLU 153LYS 154 0.0155
LYS 154TYR 155 0.0003
TYR 155ALA 156 0.0001
ALA 156GLN 157 0.0002
GLN 157ALA 158 -0.0003
ALA 158TYR 159 -0.0001
TYR 159PRO 160 -0.0104
PRO 160ASN 161 -0.0002
ASN 161VAL 162 -0.0002
VAL 162SER 163 -0.0017
SER 163ALA 164 -0.0002
ALA 164LYS 165 0.0001
LYS 165ILE 166 -0.0752
ILE 166ASP 167 0.0001
ASP 167TYR 168 0.0001
TYR 168ASP 169 0.0343
ASP 169ASP 170 -0.0001
ASP 170GLU 171 0.0001
GLU 171MET 172 0.0074
MET 172ALA 173 0.0001
ALA 173TYR 174 0.0000
TYR 174SER 175 0.0412
SER 175GLU 176 0.0001
GLU 176SER 177 -0.0001
SER 177GLN 178 -0.0111
GLN 178LEU 179 0.0001
LEU 179ILE 180 0.0002
ILE 180ALA 181 -0.0127
ALA 181LYS 182 0.0000
LYS 182PHE 183 0.0002
PHE 183GLY 184 -0.0239
GLY 184THR 185 -0.0003
THR 185ALA 186 0.0005
ALA 186PHE 187 0.0274
PHE 187LYS 188 -0.0000
LYS 188ALA 189 -0.0002
ALA 189VAL 190 0.0038
VAL 190ASN 191 0.0003
ASN 191ASN 192 -0.0001
ASN 192SER 193 -0.0064
SER 193LEU 194 0.0003
LEU 194ASN 195 -0.0002
ASN 195VAL 196 -0.0137
VAL 196ASN 197 0.0003
ASN 197PHE 198 -0.0001
PHE 198GLY 199 0.0233
GLY 199ALA 200 0.0000
ALA 200ILE 201 -0.0002
ILE 201SER 202 -0.0091
SER 202GLU 203 0.0002
GLU 203GLY 204 -0.0005
GLY 204LYS 205 0.0025
LYS 205MET 206 0.0001
MET 206GLN 207 -0.0002
GLN 207GLU 208 -0.0176
GLU 208GLU 209 -0.0001
GLU 209VAL 210 0.0003
VAL 210ILE 211 -0.0232
ILE 211SER 212 0.0002
SER 212PHE 213 -0.0002
PHE 213LYS 214 -0.0457
LYS 214GLN 215 -0.0004
GLN 215ILE 216 0.0000
ILE 216TYR 217 -0.0201
TYR 217TYR 218 0.0002
TYR 218ASN 219 -0.0002
ASN 219VAL 220 -0.0468
VAL 220ASN 221 0.0000
ASN 221VAL 222 -0.0000
VAL 222ASN 223 -0.0086
ASN 223GLU 224 0.0001
GLU 224PRO 225 -0.0000
PRO 225THR 226 -0.0097
THR 226ARG 227 0.0000
ARG 227PRO 228 0.0001
PRO 228SER 229 -0.0015
SER 229ARG 230 -0.0002
ARG 230PHE 231 0.0004
PHE 231PHE 232 -0.0019
PHE 232GLY 233 -0.0003
GLY 233LYS 234 0.0001
LYS 234ALA 235 -0.0039
ALA 235VAL 236 -0.0002
VAL 236THR 237 -0.0002
THR 237LYS 238 -0.0026
LYS 238GLU 239 -0.0000
GLU 239GLN 240 -0.0000
GLN 240LEU 241 0.0007
LEU 241GLN 242 -0.0000
GLN 242ALA 243 0.0002
ALA 243LEU 244 0.0076
LEU 244GLY 245 0.0002
GLY 245VAL 246 -0.0000
VAL 246ASN 247 -0.0083
ASN 247ALA 248 0.0000
ALA 248GLU 249 0.0003
GLU 249ASN 250 -0.0026
ASN 250PRO 251 0.0003
PRO 251PRO 252 0.0002
PRO 252ALA 253 -0.0038
ALA 253TYR 254 -0.0001
TYR 254ILE 255 0.0002
ILE 255SER 256 0.0009
SER 256SER 257 0.0002
SER 257VAL 258 -0.0002
VAL 258ALA 259 -0.0257
ALA 259TYR 260 0.0000
TYR 260GLY 261 0.0002
GLY 261ARG 262 -0.0269
ARG 262GLN 263 0.0000
GLN 263VAL 264 -0.0002
VAL 264TYR 265 -0.0210
TYR 265LEU 266 0.0001
LEU 266LYS 267 -0.0002
LYS 267LEU 268 0.0011
LEU 268SER 269 -0.0001
SER 269THR 270 0.0001
THR 270ASN 271 -0.0604
ASN 271SER 272 -0.0002
SER 272HIS 273 -0.0001
HIS 273SER 274 -0.0255
SER 274THR 275 -0.0001
THR 275LYS 276 0.0000
LYS 276VAL 277 0.0050
VAL 277LYS 278 0.0001
LYS 278ALA 279 0.0002
ALA 279ALA 280 0.0156
ALA 280PHE 281 0.0000
PHE 281ASP 282 0.0000
ASP 282ALA 283 -0.0055
ALA 283ALA 284 -0.0001
ALA 284VAL 285 0.0000
VAL 285SER 286 -0.0126
SER 286GLY 287 0.0001
GLY 287LYS 288 -0.0003
LYS 288SER 289 -0.0129
SER 289VAL 290 0.0002
VAL 290SER 291 0.0000
SER 291GLY 292 -0.0110
GLY 292ASP 293 -0.0000
ASP 293VAL 294 0.0000
VAL 294GLU 295 -0.0038
GLU 295LEU 296 0.0001
LEU 296THR 297 0.0001
THR 297ASN 298 0.0035
ASN 298ILE 299 0.0001
ILE 299ILE 300 -0.0001
ILE 300LYS 301 -0.0168
LYS 301ASN 302 -0.0002
ASN 302SER 303 -0.0000
SER 303SER 304 0.0330
SER 304PHE 305 0.0002
PHE 305LYS 306 0.0002
LYS 306ALA 307 -0.0016
ALA 307VAL 308 -0.0000
VAL 308ILE 309 -0.0004
ILE 309TYR 310 0.0118
TYR 310GLY 311 0.0000
GLY 311GLY 312 -0.0001
GLY 312SER 313 -0.0013
SER 313ALA 314 -0.0001
ALA 314LYS 315 0.0002
LYS 315ASP 316 -0.0021
ASP 316GLU 317 -0.0001
GLU 317VAL 318 -0.0002
VAL 318GLN 319 0.0373
GLN 319ILE 320 0.0003
ILE 320ILE 321 0.0001
ILE 321ASP 322 0.0231
ASP 322GLY 323 -0.0003
GLY 323ASN 324 0.0003
ASN 324LEU 325 0.0202
LEU 325GLY 326 0.0002
GLY 326ASP 327 -0.0001
ASP 327LEU 328 0.0112
LEU 328ARG 329 0.0002
ARG 329ASP 330 0.0003
ASP 330ILE 331 0.0146
ILE 331LEU 332 -0.0002
LEU 332LYS 333 0.0003
LYS 333LYS 334 0.0327
LYS 334GLY 335 -0.0002
GLY 335ALA 336 0.0002
ALA 336THR 337 -0.0470
THR 337PHE 338 -0.0005
PHE 338ASN 339 0.0002
ASN 339ARG 340 -0.0108
ARG 340GLU 341 -0.0001
GLU 341THR 342 -0.0002
THR 342PRO 343 -0.0032
PRO 343GLY 344 -0.0001
GLY 344VAL 345 0.0002
VAL 345PRO 346 0.0019
PRO 346ILE 347 0.0002
ILE 347ALA 348 0.0001
ALA 348TYR 349 -0.0215
TYR 349THR 350 0.0004
THR 350THR 351 -0.0002
THR 351ASN 352 -0.0098
ASN 352PHE 353 -0.0001
PHE 353LEU 354 0.0001
LEU 354LYS 355 -0.0038
LYS 355ASP 356 0.0002
ASP 356ASN 357 -0.0001
ASN 357GLU 358 -0.0012
GLU 358LEU 359 -0.0002
LEU 359ALA 360 0.0003
ALA 360VAL 361 0.0041
VAL 361ILE 362 -0.0000
ILE 362LYS 363 0.0003
LYS 363ASN 364 0.0122
ASN 364ASN 365 -0.0003
ASN 365SER 366 0.0002
SER 366GLU 367 0.0769
GLU 367TYR 368 -0.0001
TYR 368ILE 369 0.0001
ILE 369GLU 370 -0.0149
GLU 370THR 371 0.0003
THR 371THR 372 0.0001
THR 372SER 373 -0.0574
SER 373LYS 374 -0.0000
LYS 374ALA 375 -0.0002
ALA 375TYR 376 -0.0456
TYR 376THR 377 -0.0001
THR 377ASP 378 -0.0002
ASP 378GLY 379 0.1432
GLY 379LYS 380 0.0002
LYS 380ILE 381 0.0000
ILE 381ASN 382 -0.0099
ASN 382ILE 383 -0.0001
ILE 383ASP 384 0.0003
ASP 384HIS 385 -0.0068
HIS 385SER 386 0.0001
SER 386GLY 387 0.0000
GLY 387GLY 388 0.0691
GLY 388TYR 389 -0.0003
TYR 389VAL 390 -0.0000
VAL 390ALA 391 0.0695
ALA 391GLN 392 -0.0000
GLN 392PHE 393 -0.0000
PHE 393ASN 394 -0.0225
ASN 394ILE 395 0.0002
ILE 395SER 396 -0.0001
SER 396TRP 397 -0.0178
TRP 397ASP 398 0.0001
ASP 398GLU 399 0.0002
GLU 399VAL 400 0.0266
VAL 400ASN 401 -0.0001
ASN 401TYR 402 -0.0001
TYR 402ASP 403 0.0100
ASP 403PRO 404 -0.0002
PRO 404GLU 405 0.0001
GLU 405GLY 406 0.0048
GLY 406ASN 407 0.0001
ASN 407GLU 408 -0.0001
GLU 408ILE 409 0.1437
ILE 409VAL 410 0.0002
VAL 410GLN 411 0.0001
GLN 411HIS 412 -0.0140
HIS 412LYS 413 -0.0001
LYS 413ASN 414 -0.0001
ASN 414TRP 415 0.1826
TRP 415SER 416 0.0003
SER 416GLU 417 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.