CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4CDB_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240221152119307497

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ALA 2 0.0001
ALA 2PRO 3 -0.0000
PRO 3PRO 4 -0.0043
PRO 4ALA 5 0.0001
ALA 5SER 6 -0.0002
SER 6PRO 7 -0.0147
PRO 7PRO 8 -0.0002
PRO 8ALA 9 0.0006
ALA 9SER 10 -0.0071
SER 10PRO 11 -0.0003
PRO 11LYS 12 -0.0000
LYS 12THR 13 -0.0011
THR 13PRO 14 0.0000
PRO 14ILE 15 0.0003
ILE 15GLU 16 -0.0014
GLU 16LYS 17 0.0001
LYS 17LYS 18 0.0001
LYS 18HIS 19 -0.0001
HIS 19ALA 20 0.0001
ALA 20ASP 21 -0.0003
ASP 21GLU 22 0.0003
GLU 22ILE 23 0.0000
ILE 23ASP 24 -0.0001
ASP 24LYS 25 -0.0035
LYS 25TYR 26 -0.0002
TYR 26ILE 27 0.0000
ILE 27GLN 28 -0.0008
GLN 28GLY 29 0.0002
GLY 29LEU 30 0.0000
LEU 30ASP 31 0.0065
ASP 31TYR 32 0.0001
TYR 32ASN 33 -0.0001
ASN 33LYS 34 0.0005
LYS 34ASN 35 -0.0002
ASN 35ASN 36 -0.0001
ASN 36VAL 37 -0.0094
VAL 37LEU 38 0.0000
LEU 38VAL 39 -0.0000
VAL 39TYR 40 0.0281
TYR 40HIS 41 0.0002
HIS 41GLY 42 -0.0005
GLY 42ASP 43 0.0967
ASP 43ALA 44 -0.0000
ALA 44VAL 45 0.0002
VAL 45THR 46 -0.0154
THR 46ASN 47 0.0000
ASN 47VAL 48 0.0001
VAL 48PRO 49 0.0169
PRO 49PRO 50 0.0002
PRO 50ARG 51 0.0001
ARG 51LYS 52 -0.0008
LYS 52GLY 53 0.0000
GLY 53TYR 54 -0.0001
TYR 54LYS 55 -0.0030
LYS 55ASP 56 -0.0002
ASP 56GLY 57 0.0000
GLY 57ASN 58 -0.0330
ASN 58GLU 59 0.0002
GLU 59TYR 60 -0.0002
TYR 60ILE 61 -0.0001
ILE 61VAL 62 -0.0002
VAL 62VAL 63 -0.0003
VAL 63GLU 64 0.0506
GLU 64LYS 65 0.0004
LYS 65LYS 66 -0.0002
LYS 66LYS 67 0.0548
LYS 67LYS 68 0.0000
LYS 68SER 69 -0.0003
SER 69ILE 70 -0.0224
ILE 70ASN 71 0.0003
ASN 71GLN 72 -0.0001
GLN 72ASN 73 -0.0092
ASN 73ASN 74 0.0000
ASN 74ALA 75 0.0001
ALA 75ASP 76 0.0055
ASP 76ILE 77 -0.0003
ILE 77GLN 78 0.0005
GLN 78VAL 79 -0.0034
VAL 79VAL 80 0.0003
VAL 80ASN 81 -0.0002
ASN 81ALA 82 -0.0168
ALA 82ILE 83 0.0003
ILE 83SER 84 0.0002
SER 84SER 85 -0.0011
SER 85LEU 86 0.0000
LEU 86THR 87 -0.0003
THR 87TYR 88 0.0138
TYR 88PRO 89 -0.0001
PRO 89GLY 90 -0.0001
GLY 90ALA 91 0.0030
ALA 91LEU 92 -0.0001
LEU 92VAL 93 -0.0001
VAL 93LYS 94 0.0048
LYS 94ALA 95 0.0000
ALA 95ASN 96 -0.0002
ASN 96SER 97 0.0071
SER 97GLU 98 0.0004
GLU 98LEU 99 0.0002
LEU 99VAL 100 0.0215
VAL 100GLU 101 0.0002
GLU 101ASN 102 0.0002
ASN 102GLN 103 0.0028
GLN 103PRO 104 -0.0003
PRO 104ASP 105 0.0001
ASP 105VAL 106 0.0129
VAL 106LEU 107 0.0003
LEU 107PRO 108 -0.0001
PRO 108VAL 109 0.0072
VAL 109LYS 110 -0.0000
LYS 110ARG 111 -0.0001
ARG 111ASP 112 0.0058
ASP 112SER 113 -0.0003
SER 113LEU 114 0.0001
LEU 114THR 115 -0.0026
THR 115LEU 116 0.0000
LEU 116SER 117 0.0002
SER 117ILE 118 -0.0031
ILE 118ASP 119 0.0001
ASP 119LEU 120 0.0002
LEU 120PRO 121 -0.0007
PRO 121GLY 122 -0.0000
GLY 122MET 123 0.0003
MET 123THR 124 -0.0069
THR 124ASN 125 0.0001
ASN 125GLN 126 0.0002
GLN 126ASP 127 0.0034
ASP 127ASN 128 0.0000
ASN 128LYS 129 -0.0005
LYS 129ILE 130 0.0026
ILE 130VAL 131 0.0001
VAL 131VAL 132 0.0000
VAL 132LYS 133 -0.0100
LYS 133ASN 134 -0.0003
ASN 134ALA 135 -0.0002
ALA 135THR 136 0.0024
THR 136LYS 137 0.0002
LYS 137SER 138 0.0002
SER 138ASN 139 0.0096
ASN 139VAL 140 0.0004
VAL 140ASN 141 -0.0004
ASN 141ASN 142 0.0145
ASN 142ALA 143 0.0000
ALA 143VAL 144 0.0001
VAL 144ASN 145 0.0029
ASN 145THR 146 -0.0004
THR 146LEU 147 0.0003
LEU 147VAL 148 -0.0064
VAL 148GLU 149 -0.0000
GLU 149ARG 150 0.0002
ARG 150TRP 151 -0.0019
TRP 151ASN 152 0.0001
ASN 152GLU 153 -0.0005
GLU 153LYS 154 0.0053
LYS 154TYR 155 0.0002
TYR 155ALA 156 0.0004
ALA 156GLN 157 0.0029
GLN 157ALA 158 -0.0003
ALA 158TYR 159 -0.0002
TYR 159PRO 160 0.0118
PRO 160ASN 161 0.0001
ASN 161VAL 162 0.0003
VAL 162SER 163 -0.0227
SER 163ALA 164 0.0001
ALA 164LYS 165 -0.0002
LYS 165ILE 166 -0.0599
ILE 166ASP 167 -0.0001
ASP 167TYR 168 -0.0002
TYR 168ASP 169 -0.0195
ASP 169ASP 170 -0.0005
ASP 170GLU 171 0.0000
GLU 171MET 172 -0.0191
MET 172ALA 173 0.0004
ALA 173TYR 174 -0.0001
TYR 174SER 175 0.0196
SER 175GLU 176 0.0001
GLU 176SER 177 -0.0002
SER 177GLN 178 -0.0138
GLN 178LEU 179 -0.0001
LEU 179ILE 180 0.0002
ILE 180ALA 181 -0.0068
ALA 181LYS 182 0.0002
LYS 182PHE 183 -0.0002
PHE 183GLY 184 -0.0086
GLY 184THR 185 0.0000
THR 185ALA 186 0.0003
ALA 186PHE 187 0.0033
PHE 187LYS 188 0.0002
LYS 188ALA 189 -0.0001
ALA 189VAL 190 -0.0051
VAL 190ASN 191 -0.0001
ASN 191ASN 192 0.0002
ASN 192SER 193 -0.0032
SER 193LEU 194 -0.0000
LEU 194ASN 195 0.0002
ASN 195VAL 196 0.0088
VAL 196ASN 197 0.0002
ASN 197PHE 198 0.0004
PHE 198GLY 199 0.0180
GLY 199ALA 200 0.0000
ALA 200ILE 201 0.0004
ILE 201SER 202 0.0274
SER 202GLU 203 -0.0003
GLU 203GLY 204 0.0002
GLY 204LYS 205 -0.0119
LYS 205MET 206 0.0004
MET 206GLN 207 -0.0003
GLN 207GLU 208 -0.0314
GLU 208GLU 209 -0.0001
GLU 209VAL 210 0.0002
VAL 210ILE 211 -0.0159
ILE 211SER 212 0.0001
SER 212PHE 213 0.0001
PHE 213LYS 214 -0.0270
LYS 214GLN 215 0.0000
GLN 215ILE 216 0.0002
ILE 216TYR 217 -0.0260
TYR 217TYR 218 -0.0001
TYR 218ASN 219 0.0003
ASN 219VAL 220 -0.0124
VAL 220ASN 221 -0.0003
ASN 221VAL 222 0.0002
VAL 222ASN 223 -0.0025
ASN 223GLU 224 -0.0001
GLU 224PRO 225 0.0004
PRO 225THR 226 -0.0019
THR 226ARG 227 0.0002
ARG 227PRO 228 -0.0001
PRO 228SER 229 0.0009
SER 229ARG 230 0.0002
ARG 230PHE 231 0.0002
PHE 231PHE 232 -0.0018
PHE 232GLY 233 -0.0001
GLY 233LYS 234 0.0003
LYS 234ALA 235 0.0027
ALA 235VAL 236 0.0002
VAL 236THR 237 0.0001
THR 237LYS 238 0.0007
LYS 238GLU 239 -0.0002
GLU 239GLN 240 -0.0003
GLN 240LEU 241 0.0019
LEU 241GLN 242 0.0002
GLN 242ALA 243 0.0000
ALA 243LEU 244 -0.0009
LEU 244GLY 245 -0.0001
GLY 245VAL 246 0.0000
VAL 246ASN 247 -0.0012
ASN 247ALA 248 -0.0003
ALA 248GLU 249 0.0001
GLU 249ASN 250 -0.0050
ASN 250PRO 251 0.0003
PRO 251PRO 252 -0.0004
PRO 252ALA 253 -0.0010
ALA 253TYR 254 -0.0001
TYR 254ILE 255 0.0003
ILE 255SER 256 0.0040
SER 256SER 257 0.0000
SER 257VAL 258 -0.0000
VAL 258ALA 259 -0.0072
ALA 259TYR 260 -0.0002
TYR 260GLY 261 -0.0002
GLY 261ARG 262 -0.0188
ARG 262GLN 263 -0.0003
GLN 263VAL 264 0.0002
VAL 264TYR 265 -0.0051
TYR 265LEU 266 0.0002
LEU 266LYS 267 -0.0001
LYS 267LEU 268 -0.0221
LEU 268SER 269 -0.0006
SER 269THR 270 0.0002
THR 270ASN 271 -0.0644
ASN 271SER 272 -0.0003
SER 272HIS 273 0.0000
HIS 273SER 274 0.0125
SER 274THR 275 -0.0003
THR 275LYS 276 0.0002
LYS 276VAL 277 0.0196
VAL 277LYS 278 -0.0001
LYS 278ALA 279 0.0003
ALA 279ALA 280 0.0161
ALA 280PHE 281 0.0001
PHE 281ASP 282 -0.0000
ASP 282ALA 283 0.0125
ALA 283ALA 284 -0.0003
ALA 284VAL 285 0.0002
VAL 285SER 286 0.0078
SER 286GLY 287 -0.0001
GLY 287LYS 288 0.0000
LYS 288SER 289 0.0005
SER 289VAL 290 -0.0001
VAL 290SER 291 -0.0003
SER 291GLY 292 0.0033
GLY 292ASP 293 -0.0001
ASP 293VAL 294 0.0001
VAL 294GLU 295 -0.0022
GLU 295LEU 296 0.0001
LEU 296THR 297 0.0004
THR 297ASN 298 0.0011
ASN 298ILE 299 -0.0003
ILE 299ILE 300 0.0000
ILE 300LYS 301 0.0026
LYS 301ASN 302 0.0002
ASN 302SER 303 -0.0002
SER 303SER 304 -0.0131
SER 304PHE 305 0.0001
PHE 305LYS 306 0.0005
LYS 306ALA 307 -0.0137
ALA 307VAL 308 -0.0003
VAL 308ILE 309 0.0004
ILE 309TYR 310 -0.0101
TYR 310GLY 311 0.0002
GLY 311GLY 312 -0.0002
GLY 312SER 313 -0.0109
SER 313ALA 314 -0.0003
ALA 314LYS 315 0.0000
LYS 315ASP 316 0.0077
ASP 316GLU 317 0.0001
GLU 317VAL 318 -0.0000
VAL 318GLN 319 -0.0136
GLN 319ILE 320 -0.0000
ILE 320ILE 321 0.0001
ILE 321ASP 322 -0.0093
ASP 322GLY 323 -0.0001
GLY 323ASN 324 0.0000
ASN 324LEU 325 0.0088
LEU 325GLY 326 -0.0001
GLY 326ASP 327 -0.0003
ASP 327LEU 328 0.0094
LEU 328ARG 329 0.0001
ARG 329ASP 330 -0.0002
ASP 330ILE 331 0.0039
ILE 331LEU 332 0.0000
LEU 332LYS 333 -0.0002
LYS 333LYS 334 -0.0137
LYS 334GLY 335 -0.0001
GLY 335ALA 336 0.0002
ALA 336THR 337 -0.0241
THR 337PHE 338 0.0002
PHE 338ASN 339 0.0003
ASN 339ARG 340 -0.0181
ARG 340GLU 341 0.0002
GLU 341THR 342 -0.0001
THR 342PRO 343 -0.0124
PRO 343GLY 344 -0.0001
GLY 344VAL 345 -0.0000
VAL 345PRO 346 -0.0019
PRO 346ILE 347 -0.0003
ILE 347ALA 348 0.0001
ALA 348TYR 349 -0.0064
TYR 349THR 350 -0.0002
THR 350THR 351 0.0001
THR 351ASN 352 -0.0032
ASN 352PHE 353 -0.0000
PHE 353LEU 354 -0.0003
LEU 354LYS 355 -0.0023
LYS 355ASP 356 -0.0002
ASP 356ASN 357 -0.0003
ASN 357GLU 358 -0.0041
GLU 358LEU 359 0.0003
LEU 359ALA 360 -0.0001
ALA 360VAL 361 0.0007
VAL 361ILE 362 0.0004
ILE 362LYS 363 -0.0002
LYS 363ASN 364 0.0131
ASN 364ASN 365 0.0005
ASN 365SER 366 -0.0005
SER 366GLU 367 0.0718
GLU 367TYR 368 0.0003
TYR 368ILE 369 -0.0001
ILE 369GLU 370 -0.0078
GLU 370THR 371 -0.0003
THR 371THR 372 0.0001
THR 372SER 373 0.0428
SER 373LYS 374 0.0000
LYS 374ALA 375 0.0002
ALA 375TYR 376 -0.0863
TYR 376THR 377 0.0002
THR 377ASP 378 0.0003
ASP 378GLY 379 -0.1729
GLY 379LYS 380 0.0002
LYS 380ILE 381 -0.0004
ILE 381ASN 382 -0.0458
ASN 382ILE 383 0.0001
ILE 383ASP 384 0.0001
ASP 384HIS 385 -0.0472
HIS 385SER 386 0.0000
SER 386GLY 387 0.0004
GLY 387GLY 388 -0.0468
GLY 388TYR 389 0.0001
TYR 389VAL 390 0.0001
VAL 390ALA 391 0.0336
ALA 391GLN 392 0.0001
GLN 392PHE 393 0.0000
PHE 393ASN 394 0.1085
ASN 394ILE 395 0.0002
ILE 395SER 396 0.0001
SER 396TRP 397 0.0979
TRP 397ASP 398 0.0001
ASP 398GLU 399 -0.0001
GLU 399VAL 400 0.1066
VAL 400ASN 401 -0.0003
ASN 401TYR 402 0.0000
TYR 402ASP 403 -0.0427
ASP 403PRO 404 -0.0003
PRO 404GLU 405 -0.0001
GLU 405GLY 406 -0.0302
GLY 406ASN 407 -0.0003
ASN 407GLU 408 -0.0000
GLU 408ILE 409 -0.0008
ILE 409VAL 410 0.0001
VAL 410GLN 411 -0.0001
GLN 411HIS 412 0.1002
HIS 412LYS 413 -0.0002
LYS 413ASN 414 0.0002
ASN 414TRP 415 -0.0061
TRP 415SER 416 0.0004
SER 416GLU 417 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.