This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
-0.0116
VAL 339
ASN 340
0.0276
ASN 340
LEU 341
-0.0203
LEU 341
ASP 342
0.0202
ASP 342
ARG 343
0.0145
ARG 343
TYR 344
0.0071
TYR 344
GLN 345
-0.0230
GLN 345
THR 346
0.0489
THR 346
ALA 347
0.0299
ALA 347
LEU 348
-0.0022
LEU 348
GLU 349
0.0128
GLU 349
GLU 350
0.0347
GLU 350
VAL 351
-0.0134
VAL 351
LEU 352
0.0132
LEU 352
SER 353
0.0220
SER 353
TRP 354
-0.0363
TRP 354
LEU 355
-0.0012
LEU 355
LEU 356
0.0548
LEU 356
SER 357
-0.0166
SER 357
ALA 358
-0.0251
ALA 358
GLU 359
0.0059
GLU 359
ASP 360
0.0687
ASP 360
THR 361
-0.1022
THR 361
LEU 362
0.0761
LEU 362
GLN 363
0.0974
GLN 363
ALA 364
0.0711
ALA 364
GLN 365
-0.1399
GLN 365
GLY 366
0.0991
GLY 366
GLU 367
-0.1279
GLU 367
ILE 368
-0.0148
ILE 368
SER 369
-0.0841
SER 369
ASN 370
-0.0154
ASN 370
ASP 371
-0.0042
ASP 371
VAL 372
0.0118
VAL 372
GLU 373
-0.0104
GLU 373
VAL 374
-0.0318
VAL 374
VAL 375
0.0072
VAL 375
LYS 376
0.0147
LYS 376
ASP 377
-0.0157
ASP 377
GLN 378
-0.0594
GLN 378
PHE 379
-0.0119
PHE 379
HIS 380
-0.0338
HIS 380
THR 381
-0.0801
THR 381
HIS 382
-0.0248
HIS 382
GLU 383
-0.0563
GLU 383
GLU 383
0.0005
GLU 383
GLY 384
-0.0029
GLY 384
TYR 385
-0.1078
TYR 385
MET 386
-0.0527
MET 386
MET 387
-0.1709
MET 387
ASP 388
0.0537
ASP 388
LEU 389
-0.1050
LEU 389
THR 390
-0.1167
THR 390
ALA 391
-0.0234
ALA 391
HIS 392
-0.0407
HIS 392
GLN 393
-0.1505
GLN 393
GLY 394
-0.0003
GLY 394
ARG 395
-0.0184
ARG 395
VAL 396
-0.0557
VAL 396
GLY 397
-0.0073
GLY 397
ASN 398
-0.0387
ASN 398
ILE 399
-0.0412
ILE 399
LEU 400
-0.0506
LEU 400
GLN 401
-0.0436
GLN 401
LEU 402
-0.0225
LEU 402
GLY 403
-0.0033
GLY 403
SER 404
-0.0331
SER 404
LYS 405
-0.0194
LYS 405
LEU 406
-0.0065
LEU 406
ILE 407
-0.0212
ILE 407
GLY 408
-0.0347
GLY 408
THR 409
-0.0174
THR 409
GLY 410
0.0267
GLY 410
LYS 411
-0.0089
LYS 411
LEU 412
-0.0596
LEU 412
SER 413
0.0481
SER 413
GLU 414
-0.0076
GLU 414
ASP 415
-0.0035
ASP 415
GLU 416
0.0240
GLU 416
GLU 417
0.0038
GLU 417
THR 418
-0.0063
THR 418
GLU 419
0.0432
GLU 419
VAL 420
0.0323
VAL 420
GLN 421
-0.0002
GLN 421
GLU 422
-0.0342
GLU 422
GLN 423
0.0539
GLN 423
MET 424
-0.0109
MET 424
ASN 425
0.0038
ASN 425
LEU 426
0.0278
LEU 426
LEU 427
0.0690
LEU 427
ASN 428
0.0038
ASN 428
SER 429
0.0560
SER 429
ARG 430
0.0309
ARG 430
TRP 431
0.0412
TRP 431
GLU 432
0.0045
GLU 432
CYS 433
0.0989
CYS 433
LEU 434
-0.0261
LEU 434
ARG 435
0.0711
ARG 435
VAL 436
0.0179
VAL 436
ALA 437
0.0355
ALA 437
SER 438
0.0277
SER 438
MET 439
0.0271
MET 439
GLU 440
0.0242
GLU 440
LYS 441
-0.0089
LYS 441
GLN 442
-0.0042
GLN 442
SER 443
0.0170
SER 443
ASN 444
0.0268
ASN 444
LEU 445
-0.0074
LEU 445
HIS 446
-0.0410
HIS 446
ARG 447
0.0338
ARG 447
VAL 448
0.0076
VAL 448
LEU 449
-0.0049
LEU 449
MET 450
-0.0237
MET 450
ASP 451
0.0264
ASP 451
LEU 452
-0.0003
LEU 452
GLN 453
-0.0149
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.