CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  receptor-ligand_model1  ***

CA strain for 2403020801211284447

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ALA 2 -0.0002
ALA 2ASP 3 -0.0150
ASP 3LYS 4 -0.0000
LYS 4ALA 5 -0.0192
ALA 5LYS 6 0.0001
LYS 6PRO 7 -0.0437
PRO 7ALA 8 0.0001
ALA 8LYS 9 -0.0173
LYS 9ALA 10 -0.0006
ALA 10ALA 11 0.0800
ALA 11ASN 12 0.0002
ASN 12ARG 13 0.1911
ARG 13THR 14 0.0000
THR 14PRO 15 0.0090
PRO 15PRO 16 0.0000
PRO 16LYS 17 0.1509
LYS 17SER 18 -0.0001
SER 18PRO 19 -0.0183
PRO 19GLY 20 -0.0001
GLY 20ASP 21 -0.2906
ASP 21PRO 22 0.0001
PRO 22SER 23 0.1050
SER 23LYS 24 0.0000
LYS 24ASP 25 0.0522
ASP 25ARG 26 -0.0003
ARG 26ALA 27 0.0142
ALA 27ALA 28 0.0001
ALA 28LYS 29 0.0466
LYS 29ARG 30 0.0001
ARG 30LEU 31 -0.0440
LEU 31SER 32 -0.0001
SER 32LEU 33 -0.0961
LEU 33GLU 34 0.0001
GLU 34SER 35 -0.0083
SER 35GLU 36 -0.0001
GLU 36GLY 37 -0.0722
GLY 37ALA 38 0.0002
ALA 38GLY 39 -0.0745
GLY 39GLU 40 0.0002
GLU 40GLY 41 0.0160
GLY 41ALA 42 0.0001
ALA 42ALA 43 0.0594
ALA 43ALA 44 -0.0000
ALA 44SER 45 0.0152
SER 45PRO 46 -0.0000
PRO 46GLU 47 0.0279
GLU 47LEU 48 0.0003
LEU 48SER 49 0.0060
SER 49ALA 50 0.0002
ALA 50LEU 51 -0.0090
LEU 51GLU 52 -0.0005
GLU 52GLU 53 -0.0115
GLU 53ALA 54 0.0001
ALA 54PHE 55 -0.0099
PHE 55ARG 56 0.0003
ARG 56ARG 57 -0.0037
ARG 57PHE 58 -0.0003
PHE 58ALA 59 -0.0176
ALA 59VAL 60 0.0001
VAL 60HIS 61 0.0145
HIS 61GLY 62 -0.0003
GLY 62ASP 63 0.0025
ASP 63ALA 64 0.0001
ALA 64ARG 65 0.0019
ARG 65ALA 66 -0.0000
ALA 66THR 67 -0.0054
THR 67GLY 68 -0.0001
GLY 68ARG 69 0.0097
ARG 69GLU 70 0.0001
GLU 70MET 71 -0.0094
MET 71HIS 72 0.0003
HIS 72GLY 73 -0.0096
GLY 73LYS 74 0.0004
LYS 74ASN 75 -0.0054
ASN 75TRP 76 0.0002
TRP 76SER 77 -0.0276
SER 77LYS 78 -0.0001
LYS 78LEU 79 -0.0369
LEU 79CYS 80 0.0002
CYS 80LYS 81 0.0195
LYS 81ASP 82 -0.0004
ASP 82CYS 83 -0.0088
CYS 83GLN 84 -0.0005
GLN 84VAL 85 0.0030
VAL 85ILE 86 0.0003
ILE 86ASP 87 -0.0050
ASP 87GLY 88 -0.0001
GLY 88ARG 89 -0.0032
ARG 89ASN 90 -0.0004
ASN 90VAL 91 -0.0058
VAL 91THR 92 0.0000
THR 92VAL 93 -0.0195
VAL 93THR 94 0.0002
THR 94ASP 95 -0.0008
ASP 95VAL 96 -0.0002
VAL 96ASP 97 -0.0025
ASP 97ILE 98 0.0005
ILE 98VAL 99 -0.0012
VAL 99PHE 100 0.0001
PHE 100SER 101 0.0006
SER 101LYS 102 -0.0001
LYS 102ILE 103 0.0016
ILE 103LYS 104 0.0001
LYS 104GLY 105 0.0027
GLY 105LYS 106 -0.0001
LYS 106SER 107 0.0009
SER 107CYS 108 0.0004
CYS 108ARG 109 0.0027
ARG 109THR 110 0.0001
THR 110ILE 111 -0.0013
ILE 111THR 112 -0.0001
THR 112PHE 113 -0.0094
PHE 113GLU 114 0.0001
GLU 114GLN 115 -0.0074
GLN 115PHE 116 0.0004
PHE 116GLN 117 0.0014
GLN 117GLU 118 -0.0001
GLU 118ALA 119 -0.0022
ALA 119LEU 120 -0.0001
LEU 120GLU 121 -0.0046
GLU 121GLU 122 -0.0002
GLU 122LEU 123 0.0007
LEU 123ALA 124 -0.0001
ALA 124LYS 125 -0.0038
LYS 125LYS 126 -0.0000
LYS 126ARG 127 0.0053
ARG 127PHE 128 -0.0001
PHE 128LYS 129 -0.0143
LYS 129ASP 130 0.0001
ASP 130LYS 131 -0.0113
LYS 131SER 132 -0.0002
SER 132SER 133 -0.0013
SER 133GLU 134 0.0001
GLU 134GLU 135 0.0016
GLU 135ALA 136 -0.0004
ALA 136VAL 137 -0.0045
VAL 137ARG 138 0.0002
ARG 138GLU 139 0.0035
GLU 139VAL 140 0.0000
VAL 140HIS 141 -0.0054
HIS 141ARG 142 0.0003
ARG 142LEU 143 -0.0058
LEU 143ILE 144 -0.0001
ILE 144GLU 145 -0.0111
GLU 145GLY 146 -0.0001
GLY 146LYS 147 -0.0096
LYS 147ALA 148 0.0002
ALA 148PRO 149 -0.0307
PRO 149ILE 150 -0.0002
ILE 150ILE 151 -0.0260
ILE 151SER 152 0.0002
SER 152GLY 153 0.0393
GLY 153VAL 154 0.0000
VAL 154THR 155 0.0050
THR 155LYS 156 -0.0003
LYS 156ALA 157 0.0090
ALA 157ILE 158 0.0003
ILE 158SER 159 0.0136
SER 159SER 160 0.0000
SER 160PRO 161 0.0006
PRO 161THR 162 -0.0002
THR 162VAL 163 0.0010
VAL 163SER 164 0.0004
SER 164ARG 165 -0.0036
ARG 165LEU 166 0.0001
LEU 166THR 167 0.0035
THR 167ASP 168 0.0003
ASP 168THR 169 0.0035
THR 169THR 170 0.0001
THR 170LYS 171 0.0034
LYS 171PHE 172 -0.0002
PHE 172THR 173 0.0020
THR 173GLY 174 -0.0001
GLY 174SER 175 0.0009
SER 175HIS 176 0.0002
HIS 176LYS 177 0.0074
LYS 177GLU 178 -0.0002
GLU 178ARG 179 0.0021
ARG 179PHE 180 -0.0001
PHE 180ASP 181 0.0144
ASP 181PRO 182 -0.0003
PRO 182SER 183 -0.0145
SER 183GLY 184 -0.0000
GLY 184LYS 185 -0.0073
LYS 185GLY 186 0.0002
GLY 186LYS 187 -0.0105
LYS 187GLY 188 -0.0003
GLY 188LYS 189 0.0317
LYS 189ALA 190 -0.0000
ALA 190GLY 191 -0.0185
GLY 191ARG 192 0.0002
ARG 192VAL 193 0.0190
VAL 193ASP 194 -0.0001
ASP 194LEU 195 -0.0156
LEU 195VAL 196 -0.0003
VAL 196ASP 197 0.0055
ASP 197GLU 198 -0.0001
GLU 198SER 199 -0.0090
SER 199GLY 200 0.0002
GLY 200TYR 201 0.0024
TYR 201VAL 202 0.0003
VAL 202SER 203 -0.0039
SER 203GLY 204 -0.0001
GLY 204TYR 205 0.0276
TYR 205LYS 206 0.0001
LYS 206HIS 207 0.0067
HIS 207ALA 208 0.0003
ALA 208GLY 209 0.0075
GLY 209THR 210 -0.0004
THR 210TYR 211 -0.0003
TYR 211ASP 212 -0.0002
ASP 212GLN 213 0.0007
GLN 213LYS 214 -0.0001
LYS 214VAL 215 0.0013
VAL 215GLN 216 -0.0001
GLN 216GLY 217 -0.0038
GLY 217GLY 218 -0.0002
GLY 218LYS 219 -0.0045

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.