This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
THR 9
ARG 10
-0.0001
ARG 10
THR 11
-0.0000
THR 11
TYR 12
-0.7313
TYR 12
ASP 13
0.0000
ASP 13
ARG 14
-0.0001
ARG 14
GLU 15
-0.0661
GLU 15
GLY 16
0.0001
GLY 16
PHE 17
-0.0001
PHE 17
LYS 18
0.6613
LYS 18
LYS 19
0.0001
LYS 19
ARG 20
-0.0002
ARG 20
ALA 21
0.1408
ALA 21
ALA 22
0.0003
ALA 22
CYS 23
-0.0000
CYS 23
LEU 24
-0.2090
LEU 24
CYS 25
0.0005
CYS 25
PHE 26
-0.0001
PHE 26
ARG 27
0.3131
ARG 27
SER 28
-0.0001
SER 28
GLU 29
-0.0000
GLU 29
GLN 30
0.0502
GLN 30
GLU 31
-0.0001
GLU 31
ASP 32
0.0002
ASP 32
GLU 33
-0.1363
GLU 33
VAL 34
-0.0000
VAL 34
LEU 35
0.0001
LEU 35
LEU 36
-0.0229
LEU 36
VAL 37
0.0003
VAL 37
SER 38
-0.0004
SER 38
SER 39
-0.0010
SER 39
SER 40
0.0001
SER 40
ARG 41
-0.0001
ARG 41
TYR 42
0.0205
TYR 42
PRO 43
0.0001
PRO 43
ASP 44
-0.0001
ASP 44
GLN 45
-0.1535
GLN 45
TRP 46
-0.0003
TRP 46
ILE 47
0.0003
ILE 47
VAL 48
0.0334
VAL 48
PRO 49
-0.0001
PRO 49
GLY 50
-0.0002
GLY 50
GLY 51
0.2697
GLY 51
GLY 52
-0.0001
GLY 52
MET 53
0.0000
MET 53
GLU 54
-0.0163
GLU 54
PRO 55
-0.0001
PRO 55
GLU 56
-0.0000
GLU 56
GLU 57
0.0629
GLU 57
GLU 58
0.0001
GLU 58
PRO 59
-0.0001
PRO 59
GLY 60
-0.2395
GLY 60
GLY 61
0.0000
GLY 61
ALA 62
0.0000
ALA 62
ALA 63
0.0049
ALA 63
VAL 64
-0.0002
VAL 64
ARG 65
-0.0001
ARG 65
GLU 66
-0.3414
GLU 66
VAL 67
0.0000
VAL 67
TYR 68
0.0003
TYR 68
GLU 69
-0.1119
GLU 69
GLU 70
-0.0000
GLU 70
ALA 71
0.0003
ALA 71
GLY 72
0.5575
GLY 72
VAL 73
0.0001
VAL 73
LYS 74
-0.0001
LYS 74
GLY 75
0.0666
GLY 75
LYS 76
0.0001
LYS 76
LEU 77
0.0002
LEU 77
GLY 78
0.2286
GLY 78
ARG 79
-0.0002
ARG 79
LEU 80
0.0001
LEU 80
LEU 81
-0.0361
LEU 81
GLY 82
-0.0001
GLY 82
ILE 83
0.0002
ILE 83
PHE 84
0.5367
PHE 84
GLU 85
0.0000
GLU 85
GLN 86
-0.0001
GLN 86
ASN 87
1.0127
ASN 87
GLN 88
0.0001
GLN 88
ASP 89
-0.0001
ASP 89
ARG 90
-0.0477
ARG 90
LYS 91
-0.0005
LYS 91
HIS 92
-0.0000
HIS 92
ARG 93
-0.0826
ARG 93
THR 94
-0.0000
THR 94
TYR 95
-0.0001
TYR 95
VAL 96
-0.6374
VAL 96
TYR 97
-0.0003
TYR 97
VAL 98
0.0004
VAL 98
LEU 99
-0.0878
LEU 99
THR 100
0.0000
THR 100
VAL 101
0.0000
VAL 101
THR 102
0.1880
THR 102
GLU 103
0.0001
GLU 103
ILE 104
-0.0001
ILE 104
LEU 105
0.0897
LEU 105
GLU 106
-0.0000
GLU 106
ASP 107
-0.0000
ASP 107
TRP 108
-0.0727
TRP 108
GLU 109
0.0000
GLU 109
ASP 110
-0.0002
ASP 110
SER 111
-0.0095
SER 111
VAL 112
0.0001
VAL 112
ASN 113
0.0004
ASN 113
ILE 114
-0.0820
ILE 114
GLY 115
0.0002
GLY 115
ARG 116
0.0000
ARG 116
LYS 117
-0.1850
LYS 117
ARG 118
-0.0001
ARG 118
GLU 119
-0.0000
GLU 119
TRP 120
-0.6200
TRP 120
PHE 121
-0.0002
PHE 121
LYS 122
0.0001
LYS 122
VAL 123
-0.3099
VAL 123
GLU 124
0.0001
GLU 124
ASP 125
-0.0000
ASP 125
ALA 126
-0.3755
ALA 126
ILE 127
-0.0003
ILE 127
LYS 128
0.0003
LYS 128
VAL 129
0.2548
VAL 129
LEU 130
0.0001
LEU 130
GLN 131
-0.0001
GLN 131
CYS 132
-0.0668
CYS 132
HIS 133
-0.0000
HIS 133
LYS 134
0.0001
LYS 134
PRO 135
0.3424
PRO 135
VAL 136
0.0001
VAL 136
HIS 137
-0.0000
HIS 137
ALA 138
-0.0080
ALA 138
GLU 139
-0.0000
GLU 139
TYR 140
0.0000
TYR 140
LEU 141
-0.0000
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.