CNRS Nantes University US2B US2B
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***  HYDROLASE 19-MAY-97 1AKI  ***

CA strain for 2403061344231916285

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0485
VAL 2PHE 3 -0.0889
PHE 3GLY 4 -0.1721
GLY 4ARG 5 -0.1773
ARG 5CYS 6 0.0004
CYS 6GLU 7 -0.0983
GLU 7LEU 8 0.0435
LEU 8ALA 9 -0.0681
ALA 9ALA 10 0.0242
ALA 10ALA 11 0.1385
ALA 11MET 12 -0.0355
MET 12LYS 13 -0.0015
LYS 13ARG 14 0.0052
ARG 14HIS 15 0.1297
HIS 15GLY 16 -0.1193
GLY 16LEU 17 -0.0446
LEU 17ASP 18 0.1041
ASP 18ASN 19 -0.0374
ASN 19TYR 20 0.2553
TYR 20ARG 21 -0.0585
ARG 21GLY 22 0.2448
GLY 22TYR 23 -0.0364
TYR 23SER 24 0.2178
SER 24LEU 25 -0.0230
LEU 25GLY 26 0.0386
GLY 26ASN 27 0.0823
ASN 27TRP 28 0.0449
TRP 28VAL 29 0.0794
VAL 29CYS 30 0.0442
CYS 30ALA 31 -0.0327
ALA 31ALA 32 0.0621
ALA 32LYS 33 0.0017
LYS 33PHE 34 0.0720
PHE 34GLU 35 -0.2612
GLU 35SER 36 0.2317
SER 36ASN 37 -0.1206
ASN 37PHE 38 0.0649
PHE 38ASN 39 -0.3632
ASN 39THR 40 -0.0335
THR 40GLN 41 0.0581
GLN 41ALA 42 0.1160
ALA 42THR 43 -0.3920
THR 43ASN 44 0.1859
ASN 44ARG 45 -0.2598
ARG 45ASN 46 -0.0289
ASN 46THR 47 -0.1363
THR 47ASP 48 0.0071
ASP 48GLY 49 -0.0623
GLY 49SER 50 -0.0119
SER 50THR 51 -0.1056
THR 51ASP 52 -0.1688
ASP 52TYR 53 0.1431
TYR 53GLY 54 -0.3649
GLY 54ILE 55 -0.1971
ILE 55LEU 56 0.1009
LEU 56GLN 57 -0.1845
GLN 57ILE 58 -0.1016
ILE 58ASN 59 0.1700
ASN 59SER 60 0.0377
SER 60ARG 61 -0.0624
ARG 61TRP 62 0.0901
TRP 62TRP 63 -0.0782
TRP 63CYS 64 0.3241
CYS 64ASN 65 0.1713
ASN 65ASP 66 0.2344
ASP 66GLY 67 -0.1640
GLY 67ARG 68 0.1777
ARG 68THR 69 0.0692
THR 69PRO 70 -0.1659
PRO 70GLY 71 0.0765
GLY 71SER 72 -0.2083
SER 72ARG 73 0.2880
ARG 73ASN 74 -0.2630
ASN 74LEU 75 0.3097
LEU 75CYS 76 0.0325
CYS 76ASN 77 0.1227
ASN 77ILE 78 -0.1342
ILE 78PRO 79 0.1418
PRO 79CYS 80 0.1299
CYS 80SER 81 -0.0107
SER 81ALA 82 0.1621
ALA 82LEU 83 -0.0009
LEU 83LEU 84 -0.0397
LEU 84SER 85 0.1814
SER 85SER 86 -0.3345
SER 86ASP 87 0.0968
ASP 87ILE 88 0.0302
ILE 88THR 89 0.0004
THR 89ALA 90 0.0843
ALA 90SER 91 -0.0197
SER 91VAL 92 0.0265
VAL 92ASN 93 0.0697
ASN 93CYS 94 0.1090
CYS 94ALA 95 0.1657
ALA 95LYS 96 -0.0634
LYS 96LYS 97 0.3949
LYS 97ILE 98 -0.0149
ILE 98VAL 99 0.4331
VAL 99SER 100 -0.0813
SER 100ASP 101 0.3236
ASP 101GLY 102 0.0639
GLY 102ASN 103 -0.0238
ASN 103GLY 104 -0.1121
GLY 104MET 105 0.0813
MET 105ASN 106 -0.0743
ASN 106ALA 107 0.2398
ALA 107TRP 108 0.0674
TRP 108VAL 109 -0.1000
VAL 109ALA 110 0.0096
ALA 110TRP 111 -0.0322
TRP 111ARG 112 0.0047
ARG 112ASN 113 0.0113
ASN 113ARG 114 -0.0407
ARG 114CYS 115 0.0020
CYS 115LYS 116 -0.0261
LYS 116GLY 117 0.0707
GLY 117THR 118 0.0209
THR 118ASP 119 -0.0783
ASP 119VAL 120 0.1270
VAL 120GLN 121 -0.0654
GLN 121ALA 122 0.0436
ALA 122TRP 123 -0.0810
TRP 123ILE 124 -0.1551
ILE 124ARG 125 0.1410
ARG 125GLY 126 0.0044
GLY 126CYS 127 0.0634
CYS 127ARG 128 -0.2522
ARG 128LEU 129 0.2820

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.